ROMS-JEDI Unit Test Cases

ROMS-JEDI Unit Test Cases

There are several ways to run the ROMS-JEDI Unit Test Cases:

• Run all the available Unit Tests using ctest:
  cd build_wc13/roms-jedi  !> sub-directory of interface root location
  ctest -N  !> lists all the Unit Tests available
  ctest -E -V get_  !> runs all the Unit Tests

• Run specific Unit Test using ctest:
  cd build_wc13/roms-jedi  !> sub-directory of interface root location
  ctest -VV -R test_romsjedi_geometry  !> run geometry Unit Test

• Run specific Unit Test using mpirun to facilitate TotalView debugging:
  cd build_wc13/roms-jedi/test
  mpirun -n 2 ../../bin/romsjedi_hofx.x testinput/hofx_4d.yaml > & log &
  mpirun -n 2 -tv ../../bin/romsjedi_hofx.x testinput/hofx_4d.yaml &

Currently, the ROMS-JEDI has the following Unit Test Cases:

ctest -VV -R	mpirun -n 2
romsjedi_coding_norms	NA
test_romsjedi_geometry	test_romsjedi_geometry testinput/geometry.yaml
test_romsjedi_geometryiterator	test_romsjedi_geometryiterator testinput/geometryiterator.yaml
test_romsjedi_state	test_romsjedi_state testinput/state.yaml
test_romsjedi_increment	test_romsjedi_increment testinput/increment.yaml
test_romsjedi_model	test_romsjedi_model testinput/model.yaml
test_romsjedi_linearmodel	test_romsjedi_linearmodel testinput/linearmodel.yaml
test_romsjedi_error_covariance	test_romsjedi_error_covariance testinput/error_covariance.yaml
test_romsjedi_hofx_nomodel	../../bin/romsjedi_hofx_nomodel.x testinput/hofx_nomodel.yaml
test_romsjedi_hofx_4d	../../bin/romsjedi_hofx.x testinput/hofx_4d.yaml
test_romsjedi_makeobs_4d	../../bin/romsjedi_hofx.x testinput/makeobs_4d.yaml
test_romsjedi_makeobs_4d_perturbed	../../bin/romsjedi_hofx.x testinput/makeobs_4d_perturbed.yaml
test_romsjedi_diffstates	../../bin/romsjedi_diffstates.x testinput/diffstates.yaml
test_romsjedi_forecast_roms	../../bin/romsjedi_forecast.x testinput/forecast_roms.yaml
test_romsjedi_bump_parameters_cor_nicas	../../bin/romsjedi_error_covariance_toolbox.x testinput/parameters_bump_cor_nicas.yaml
test_romsjedi_bump_loc_parameters_cor_nicas	../../bin/romsjedi_error_covariance_toolbox.x testinput/parameters_bump_loc_cor_nicas.yaml
test_romsjedi_dirac_cov_nicas	../../bin/romsjedi_error_covariance_toolbox.x testinput/dirac_cov_nicas.yaml
test_romsjedi_ens_pert	../../bin/romsjedi_ens_pert.x testinput/ens_perturbation.yaml
test_romsjedi_ens_variance	../../bin/romsjedi_ens_variance.x testinput/ens_variance.yaml
test_romsjedi_ens_mean_variance	../../bin/romsjedi_ens_mean_variance.x testinput/ens_mean_variance.yaml
test_romsjedi_ens_recenter	../../bin/romsjedi_ens_recenter.x testinput/ens_recenter.yaml
test_romsjedi_ens_hofx	mpirun -n 6 ../../bin/romsjedi_ens_hofx.x testinput/ens_hofx.yaml
test_romsjedi_dirac_ens_cov_nicas	../../bin/romsjedi_error_covariance_toolbox.x testinput/dirac_ens_cov_nicas.yaml
test_romsjedi_3dvar_zero_obs	../../bin/romsjedi_var.x testinput/3dvar_zero_obs.yaml
test_romsjedi_3dvar_regular_single_obs	../../bin/romsjedi_var.x testinput/3dvar_regular_single_obs.yaml
test_romsjedi_3dfgat_single_obs	../../bin/romsjedi_var.x testinput/3dfgat_single_obs.yaml
test_romsjedi_4dfgat_single_obs	../../bin/romsjedi_var.x testinput/4dfgat_single_obs.yaml
test_romsjedi_3dvar_regular_primal	../../bin/romsjedi_var.x testinput/3dvar_regular_primal.yaml
test_romsjedi_3dvar_regular_dual	../../bin/romsjedi_var.x testinput/3dvar_regular_dual.yaml
test_romsjedi_3dfgat_primal	../../bin/romsjedi_var.x testinput/3dfgat_primal.yaml
test_romsjedi_3dfgat_dual	../../bin/romsjedi_var.x testinput/3dfgat_dual.yaml
test_romsjedi_4dfgat_primal	../../bin/romsjedi_var.x testinput/4dfgat_primal.yaml
test_romsjedi_4dfgat_dual	../../bin/romsjedi_var.x testinput/4dfgat_dual.yaml
test_romsjedi_3denvar_regular_primal	../../bin/romsjedi_var.x testinput/3denvar_regular_primal.yaml
test_romsjedi_3denvar_regular_dual	../../bin/romsjedi_var.x testinput/3denvar_regular_dual.yaml
test_romsjedi_3denvar_4dfgat_primal	../../bin/romsjedi_var.x testinput/3denvar_4dfgat_primal.yaml
test_romsjedi_3denvar_4dfgat_dual	../../bin/romsjedi_var.x testinput/3denvar_4dfgat_dual.yaml
test_romsjedi_3dhyb_regular_primal	../../bin/romsjedi_var.x testinput/3dhyb_regular_primal.yaml
test_romsjedi_3dhyb_regular_dual	../../bin/romsjedi_var.x testinput/3dhyb_regular_dual.yaml
test_romsjedi_3dhyb_4dfgat_primal	../../bin/romsjedi_var.x testinput/3dhyb_4dfgat_primal.yaml
test_romsjedi_3dhyb_4dfgat_dual	../../bin/romsjedi_var.x testinput/3dhyb_4dfgat_dual.yaml
test_romsjedi_letkf	../../bin/romsjedi_letkf.x testinput/letkf.yaml
test_romsjedi_letkf_split_observer	../../bin/romsjedi_letkf.x testinput/letkf_split_observer.yaml
test_romsjedi_letkf_split_solver	../../bin/romsjedi_letkf.x testinput/letkf_split_solver.yaml
test_romsjedi_letkf_3dhyb	../../bin/romsjedi_var.x testinput/letkf_3dhyb.yaml