#677 closed bug (Fixed)
Light formulation in npzd_Powell.h without SPITZ cpp flag — at Version 1
Reported by: | dwhitt | Owned by: | arango |
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Priority: | minor | Milestone: | Release ROMS/TOMS 3.7 |
Component: | Nonlinear | Version: | 3.7 |
Keywords: | Cc: | dw494@… |
Description (last modified by )
I'm following up on a forum post entitled NPZD_POWELL without SPITZ CPP option dated Nov 27 2013. This post discusses a bug that has gone unfixed as of January 14 2015 when I downloaded the version of ROMS I am currently working with.
To reiterate:
The option to run NPZD_POWELL without SPITZ flag produces an error in the phytoplankton growth rate. Perhaps make the SPITZ option activated by default as that follows Powell et al. 2006, delete the alternative code, and delete the SPITZ CPP option?
For example, in npzd_Powell.h replace the following:
#ifdef SPITZ cff1=dtdays*Vm_NO3(ng)*PhyIS(ng) cff2=Vm_NO3(ng)*Vm_NO3(ng) cff3=PhyIS(ng)*PhyIS(ng) #else cff1=dtdays*Vm_NO3(ng) #endif DO k=1,N(ng) DO i=Istr,Iend #ifdef SPITZ cff4=1.0_r8/SQRT(cff2+cff3*Light(i,k)*Light(i,k)) cff=Bio(i,k,iPhyt)* & & cff1*cff4*Light(i,k)/ & & (K_NO3(ng)+Bio(i,k,iNO3_)) #else cff=Bio(i,k,iPhyt)* & & cff1*Light(i,k)/ & & (K_NO3(ng)+Bio(i,k,iNO3_)) #endif Bio(i,k,iNO3_)=Bio(i,k,iNO3_)/(1.0_r8+cff) Bio(i,k,iPhyt)=Bio(i,k,iPhyt)+ & & Bio(i,k,iNO3_)*cff END DO END DO
with:
cff1=dtdays*Vm_NO3(ng)*PhyIS(ng) cff2=Vm_NO3(ng)*Vm_NO3(ng) cff3=PhyIS(ng)*PhyIS(ng) DO k=1,N(ng) DO i=Istr,Iend cff4=1.0_r8/SQRT(cff2+cff3*Light(i,k)*Light(i,k)) cff=Bio(i,k,iPhyt)* & & cff1*cff4*Light(i,k)/ & & (K_NO3(ng)+Bio(i,k,iNO3_)) Bio(i,k,iNO3_)=Bio(i,k,iNO3_)/(1.0_r8+cff) Bio(i,k,iPhyt)=Bio(i,k,iPhyt)+ & & Bio(i,k,iNO3_)*cff END DO END DO
Change History (1)
comment:1 by , 10 years ago
Description: | modified (diff) |
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Resolution: | → Fixed |
Status: | new → closed |
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Yes, thank you for bringing this to my attention. I missed this forum message. I also corrected that tangent linear, representer, and adjoint versions of this routine.