sediment.in - Revision history

Robertson at 17:51, 16 January 2020

2020-01-16T17:51:53Z

Robertson: Text replacement - "ocean.in" to "roms.in"

2019-07-17T15:13:37Z

Text replacement - "ocean.in" to "roms.in"

← Older revision		Revision as of 15:13, 17 July 2019
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	<div class="title">Sediment Model Input Script - <span class="red">sediment.in</span></div>		<div class="title">Sediment Model Input Script - <span class="red">sediment.in</span></div>

	The <span class="red">sediment.in</span> file sets the parameters for sediment output. The name of this file is set by the <span class="blue">SPARNAM</span> keyword in the [[~~ocean~~.in]] file. This standard input ASCII file is organized in several sections as shown below, with links to more detailed explanation where required.		The <span class="red">sediment.in</span> file sets the parameters for sediment output. The name of this file is set by the <span class="blue">SPARNAM</span> keyword in the [[roms.in]] file. This standard input ASCII file is organized in several sections as shown below, with links to more detailed explanation where required.

Robertson at 16:23, 16 February 2018

2018-02-16T16:23:53Z

← Older revision		Revision as of 16:23, 16 February 2018
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	* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff). [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.		* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff). [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
	:<div class="box"> [[Variables#LtracerSrc\|~~MUD_Ltsrc~~]] == F</div>		:<div class="box"> [[Variables#LtracerSrc\|SAND_Ltsrc]] == F</div>

	*Logical switches to specify which variables to process for tracers climatology: [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.		*Logical switches to specify which variables to process for tracers climatology: [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.

Robertson at 19:04, 17 August 2016

2016-08-17T19:04:45Z

← Older revision		Revision as of 19:04, 17 August 2016
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	==Bed Layer and Bottom Sediment Parameters==		==Bed Layer and Bottom Sediment Parameters==

	* Logical switches to activate writing of bed layer and bottom sediment fields into output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.		* Logical switches to activate writing of bed layer and bottom sediment fields into history output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.
	:<div class="box"> [[Variables#Hout\|Hout(ithck)]] == T ! bed_thickness sediment layer thickness<br /> [[Variables#Hout\|Hout(iaged)]] == T ! bed_age sediment layer age<br /> [[Variables#Hout\|Hout(iporo)]] == T ! bed_porosity sediment layer porosity<br /> [[Variables#Hout\|Hout(idiff)]] == F ! bed_biodiff biodiffusivity<br/><br /> [[Variables#Hout\|Hout(ids50)]] == T ! grain_diameter mean grain diameter<br /> [[Variables#Hout\|Hout(idens)]] == T ! grain_density mean grain density<br /> [[Variables#Hout\|Hout(iwsed)]] == T ! settling_vel mean settling velocity<br /> [[Variables#Hout\|Hout(itauc)]] == T ! erosion_stress critical erosion stress<br /> [[Variables#Hout\|Hout(irlen)]] == T ! ripple_length ripple length<br /> [[Variables#Hout\|Hout(irhgt)]] == T ! ripple_height ripple height<br /> [[Variables#Hout\|Hout(ibwav)]] == T ! bed_wave_amp wave excursion amplitude<br /> [[Variables#Hout\|Hout(izdef)]] == T ! Zo_def default bottom roughness<br /> [[Variables#Hout\|Hout(izapp)]] == T ! Zo_app apparent bottom roughness<br /> [[Variables#Hout\|Hout(izNik)]] == T ! Zo_Nik Nikuradse bottom roughness<br /> [[Variables#Hout\|Hout(izbio)]] == T ! Zo_bio biological bottom roughness<br /> [[Variables#Hout\|Hout(izbfm)]] == T ! Zo_bedform bed form bottom roughness<br /> [[Variables#Hout\|Hout(izbld)]] == T ! Zo_bedload bed load bottom roughness<br /> [[Variables#Hout\|Hout(izwbl)]] == T ! Zo_wbl wave bottom roughness<br /> [[Variables#Hout\|Hout(iactv)]] == T ! active_layer_thickness active layer thickness<br /> [[Variables#Hout\|Hout(ishgt)]] == T ! saltation saltation height<br /></div>		:<div class="box"> [[Variables#Hout\|Hout(ithck)]] == T ! bed_thickness sediment layer thickness<br /> [[Variables#Hout\|Hout(iaged)]] == T ! bed_age sediment layer age<br /> [[Variables#Hout\|Hout(iporo)]] == T ! bed_porosity sediment layer porosity<br /> [[Variables#Hout\|Hout(idiff)]] == F ! bed_biodiff biodiffusivity<br/><br /> [[Variables#Hout\|Hout(ids50)]] == T ! grain_diameter mean grain diameter<br /> [[Variables#Hout\|Hout(idens)]] == T ! grain_density mean grain density<br /> [[Variables#Hout\|Hout(iwsed)]] == T ! settling_vel mean settling velocity<br /> [[Variables#Hout\|Hout(itauc)]] == T ! erosion_stress critical erosion stress<br /> [[Variables#Hout\|Hout(irlen)]] == T ! ripple_length ripple length<br /> [[Variables#Hout\|Hout(irhgt)]] == T ! ripple_height ripple height<br /> [[Variables#Hout\|Hout(ibwav)]] == T ! bed_wave_amp wave excursion amplitude<br /> [[Variables#Hout\|Hout(izdef)]] == T ! Zo_def default bottom roughness<br /> [[Variables#Hout\|Hout(izapp)]] == T ! Zo_app apparent bottom roughness<br /> [[Variables#Hout\|Hout(izNik)]] == T ! Zo_Nik Nikuradse bottom roughness<br /> [[Variables#Hout\|Hout(izbio)]] == T ! Zo_bio biological bottom roughness<br /> [[Variables#Hout\|Hout(izbfm)]] == T ! Zo_bedform bed form bottom roughness<br /> [[Variables#Hout\|Hout(izbld)]] == T ! Zo_bedload bed load bottom roughness<br /> [[Variables#Hout\|Hout(izwbl)]] == T ! Zo_wbl wave bottom roughness<br /> [[Variables#Hout\|Hout(iactv)]] == T ! active_layer_thickness active layer thickness<br /> [[Variables#Hout\|Hout(ishgt)]] == T ! saltation saltation height<br /></div>

			* Logical switches to activate writing of bed layer and bottom sediment fields into quicksave output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.
			:<div class="box"> [[Variables#Qout\|Qout(ithck)]] == F ! bed_thickness sediment layer thickness<br /> [[Variables#Qout\|Qout(iaged)]] == F ! bed_age sediment layer age<br /> [[Variables#Qout\|Qout(iporo)]] == F ! bed_porosity sediment layer porosity<br /> [[Variables#Qout\|Qout(idiff)]] == F ! bed_biodiff biodiffusivity<br/><br /> [[Variables#Qout\|Qout(ids50)]] == F ! grain_diameter mean grain diameter<br /> [[Variables#Qout\|Qout(idens)]] == F ! grain_density mean grain density<br /> [[Variables#Qout\|Qout(iwsed)]] == F ! settling_vel mean settling velocity<br /> [[Variables#Qout\|Qout(itauc)]] == F ! erosion_stress critical erosion stress<br /> [[Variables#Qout\|Qout(irlen)]] == F ! ripple_length ripple length<br /> [[Variables#Qout\|Qout(irhgt)]] == F ! ripple_height ripple height<br /> [[Variables#Qout\|Qout(ibwav)]] == F ! bed_wave_amp wave excursion amplitude<br /> [[Variables#Qout\|Qout(izdef)]] == F ! Zo_def default bottom roughness<br /> [[Variables#Qout\|Qout(izapp)]] == F ! Zo_app apparent bottom roughness<br /> [[Variables#Qout\|Qout(izNik)]] == F ! Zo_Nik Nikuradse bottom roughness<br /> [[Variables#Qout\|Qout(izbio)]] == F ! Zo_bio biological bottom roughness<br /> [[Variables#Qout\|Qout(izbfm)]] == F ! Zo_bedform bed form bottom roughness<br /> [[Variables#Qout\|Qout(izbld)]] == F ! Zo_bedload bed load bottom roughness<br /> [[Variables#Qout\|Qout(izwbl)]] == F ! Zo_wbl wave bottom roughness<br /> [[Variables#Qout\|Qout(iactv)]] == F ! active_layer_thickness active layer thickness<br /> [[Variables#Qout\|Qout(ishgt)]] == F ! saltation saltation height<br /></div>


	==Non-cohesive Sediment Parameters==		==Non-cohesive Sediment Parameters==
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	* Logical switches to activate writing of non-cohesive sediment into output history file.		* Logical switches to activate writing of non-cohesive sediment into output history file.
	:<div class="box"> [[Variables#Hout\|Hout(idsand)]] == T ! sand_01, ... suspended concentration<br /> [[Variables#Hout\|Hout(iSfrac)]] == T ! sandfrac_01, ... bed layer fraction<br /> [[Variables#Hout\|Hout(iSmass)]] == T ! sandmass_01, ... bed layer mass<br /> [[Variables#Hout\|Hout(iSUbld)]] == T ! bedload_Usand_01, ... bed load at U-points<br /> [[Variables#Hout\|Hout(iSVbld)]] == T ! bedload_Vsand_01, ... bed load at V-points</div>		:<div class="box"> [[Variables#Hout\|Hout(idsand)]] == T ! sand_01, ... suspended concentration<br /> [[Variables#Hout\|Hout(iSfrac)]] == T ! sandfrac_01, ... bed layer fraction<br /> [[Variables#Hout\|Hout(iSmass)]] == T ! sandmass_01, ... bed layer mass<br /> [[Variables#Hout\|Hout(iSUbld)]] == T ! bedload_Usand_01, ... bed load at U-points<br /> [[Variables#Hout\|Hout(iSVbld)]] == T ! bedload_Vsand_01, ... bed load at V-points</div>

			* Logical switches to activate writing of non-cohesive sediment into output quicksave file.
			:<div class="box"> [[Variables#Qout\|Qout(idsand)]] == F ! sand_01, ... suspended concentration<br /> [[Variables#Qout\|Qout(iSsand)]] == F ! sand_01_sur, ... surface concentration<br /> [[Variables#Qout\|Qout(iSfrac)]] == F ! sandfrac_01, ... bed layer fraction<br /> [[Variables#Qout\|Qout(iSmass)]] == F ! sandmass_01, ... bed layer mass<br /> [[Variables#Qout\|Qout(iSUbld)]] == F ! bedload_Usand_01, ... bed load at U-points<br /> [[Variables#Qout\|Qout(iSVbld)]] == F ! bedload_Vsand_01, ... bed load at V-points</div>

	* Logical switches to activate writing of time-averaged, non-cohesive sediment fields into averages output file.		* Logical switches to activate writing of time-averaged, non-cohesive sediment fields into averages output file.
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	* Logical switches to activate writing of cohesive sediment into output history file.		* Logical switches to activate writing of cohesive sediment into output history file.
	:<div class="box"> [[Variables#Hout\|Hout(idmud)]] == T ! mud_01, ... suspended concentration<br /> [[Variables#Hout\|Hout(iMfrac)]] == T ! mudfrac_01, ... bed layer fraction<br /> [[Variables#Hout\|Hout(iMmass)]] == T ! mudmass_01, ... bed layer mass<br /> [[Variables#Hout\|Hout(iMUbld)]] == T ! bedload_Umud_01, ... bed load at U-points<br /> [[Variables#Hout\|Hout(iMVbld)]] == T ! bedload_Vmud_01, ... bed load at V-points</div>		:<div class="box"> [[Variables#Hout\|Hout(idmud)]] == T ! mud_01, ... suspended concentration<br /> [[Variables#Hout\|Hout(iMfrac)]] == T ! mudfrac_01, ... bed layer fraction<br /> [[Variables#Hout\|Hout(iMmass)]] == T ! mudmass_01, ... bed layer mass<br /> [[Variables#Hout\|Hout(iMUbld)]] == T ! bedload_Umud_01, ... bed load at U-points<br /> [[Variables#Hout\|Hout(iMVbld)]] == T ! bedload_Vmud_01, ... bed load at V-points</div>

			* Logical switches to activate writing of cohesive sediment into output quicksave file.
			:<div class="box"> [[Variables#Qout\|Qout(idmud)]] == F ! mud_01, ... suspended concentration<br /> [[Variables#Qout\|Qout(iSmud)]] == F ! mud_01_sur, ... surface concentration<br /> [[Variables#Qout\|Qout(iMfrac)]] == F ! mudfrac_01, ... bed layer fraction<br /> [[Variables#Qout\|Qout(iMmass)]] == F ! mudmass_01, ... bed layer mass<br /> [[Variables#Qout\|Qout(iMUbld)]] == F ! bedload_Umud_01, ... bed load at U-points<br /> [[Variables#Qout\|Qout(iMVbld)]] == F ! bedload_Vmud_01, ... bed load at V-points</div>

	* Logical switches to activate writing of time-averaged, cohesive sediment fields into averages output file.		* Logical switches to activate writing of time-averaged, cohesive sediment fields into averages output file.

Robertson at 20:11, 7 June 2016

2016-06-07T20:11:27Z

Show changes

Robertson at 17:57, 29 November 2012

2012-11-29T17:57:17Z

← Older revision		Revision as of 17:57, 29 November 2012
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	* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box"> [[Variables#morph_fac\|MUD_MORPH_FAC]] == 1.0d0 1.0d0 ! nondimensional</div>		* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box"> [[Variables#morph_fac\|MUD_MORPH_FAC]] == 1.0d0 1.0d0 ! nondimensional</div>

	* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff).		*Logical switches to specify which variables to process for tracers climatology: [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
	:<div class="box"> [[Variables#LtracerSrc\|~~MUD_Ltracer~~]] == F F</div>		:<div class="box"> [[Variables#MUD_Ltclm\|MUD_Ltclm]] == F</div>

			* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff). [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
			:<div class="box"> [[Variables#LtracerSrc\|MUD_Ltsrc]] == F</div>

	* Logical switches to activate writing of cohesive sediment into output history file.		* Logical switches to activate writing of cohesive sediment into output history file.
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	* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box">[[Variables#morph_fac\|SAND_MORPH_FAC]] == 1.0d0 ! nondimensional</div>		* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box">[[Variables#morph_fac\|SAND_MORPH_FAC]] == 1.0d0 ! nondimensional</div>

	* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff).<div class="box"> [[Variables#LtracerSrc\|~~SAND_Ltracer~~]] == F</div>		*Logical switches to specify which variables to process for tracers climatology: [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
			:<div class="box"> [[Variables#SAND_Ltclm\|SAND_Ltclm]] == F</div>

			* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff). [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
			:<div class="box"> [[Variables#LtracerSrc\|MUD_Ltsrc]] == F</div>

	* Logical switches to activate writing of non-cohesive sediment into output history file.		* Logical switches to activate writing of non-cohesive sediment into output history file.

Robertson at 14:53, 12 September 2011

2011-09-12T14:53:26Z

← Older revision		Revision as of 14:53, 12 September 2011
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	* Bed load transport rate coefficient, [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box"> [[Variables#bedload_coeff\|BEDLOAD_COEFF]] == 0.05d0</div>		* Bed load transport rate coefficient, [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box"> [[Variables#bedload_coeff\|BEDLOAD_COEFF]] == 0.05d0</div>

			==Lateral Open Boundary Conditions Parameters==

			*The lateral boundary conditions are entered with a keyword. A value is expected for each boundary segment per nested grid for each state variable. The sediment tracer variables (cohesive and non-cohesive) require [1:4,1:[[NCS]]+[[NNS]],[[Ngrids]]] values. If specifying every tracer, enter first 1:[[NCS]] cohesive sediment entries followed by 1:[[NNS]] non-cohesive sediment entries. The boundary order is: '''1'''=west, '''2'''=south, '''3'''=east, and '''4'''=north. That is, anticlockwise starting at the western boundary.<br /><br />The keyword is case insensitive and usually has three characters. However, it is possible to have compound keywords, if applicable. For example, the keyword '''RadNud''' implies radiation boundary condition with nudging. This combination is usually used in active/passive radiation conditions.<br /><br />{{note}}'''Notice:''' It is possible to specify the lateral boundary conditions for all biological tracers in a compact form with a single entry. If so, all the biological tracers are assumed to have the same boundary condition as the single entry.<div class="box"><span class="twilightBlue">! Keyword Lateral Boundary Condition Type<br />!<br />! Cla Clamped _____N_____ j=Mm<br />! Clo Closed \| 4 \|<br />! Gra Gradient \| \|<br />! Nes Nested 1 W E 3<br />! Nud Nudging \| \|<br />! Per Periodic \|_____S_____\|<br />! Rad Radiation 2 j=1<br />! i=1 i=Lm<br />! W S E N<br />! e o a o<br />! s u s r<br />! t t t t<br />! h h<br />!<br />! 1 2 3 4</span><br /><br /> [[Variables#LBC\|LBC(isTvar)]] == Per Clo Per Clo ! [[Variables#idsed\|idsed(:)]], compact</div>

			*Adjoint-based algorithms can have different lateral boundary conditions keywords.<div class="box">[[Variables#ad_LBC\|ad_LBC(isTvar)]] == Per Clo Per Clo ! [[Variables#idsed\|idsed(:)]], compact</div>

	==Suspended Cohesive Sediment Parameters==		==Suspended Cohesive Sediment Parameters==

Robertson at 20:31, 25 March 2011

2011-03-25T20:31:15Z

Show changes

Robertson at 19:38, 26 May 2010

2010-05-26T19:38:12Z

← Older revision		Revision as of 19:38, 26 May 2010
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	* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box"> [[Variables#morph_fac\|MUD_MORPH_FAC]] == 1.0d0 1.0d0 ! nondimensional</div>		* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box"> [[Variables#morph_fac\|MUD_MORPH_FAC]] == 1.0d0 1.0d0 ! nondimensional</div>

	* Logical switch ~~('''TRUE'''/'''FALSE''')~~ to specify which variables to consider on tracers point Sources/Sinks (like river runoff).<div class="box"> [[Variables#LtracerSrc\|MUD_Ltracer]] == F F</div>		* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff).
			:<div class="box"> [[Variables#LtracerSrc\|MUD_Ltracer]] == F F</div>

	* Logical ~~switch ('''TRUE'''/'''FALSE''')~~ to activate writing of cohesive sediment into output ~~NetCDF~~ file~~(s)~~.<div class="box"> [[Hout\|Hout(idmud)]] == T ! suspended concentration<br /> [[Hout\|Hout(iMfrac)]] == T ! bed layer fraction<br /> [[Hout\|Hout(iMmass)]] == T ! bed layer mass<br /> [[Hout\|Hout(iMUbld)]] == T ! bed load at U-points<br /> [[Hout\|Hout(iMVbld)]] == T ! bed load at V-points</div>		* Logical switches to activate writing of cohesive sediment into output history file.
			:<div class="box"> [[Variables#Hout\|Hout(idmud)]] == T ! suspended concentration<br /> [[Variables#Hout\|Hout(iMfrac)]] == T ! bed layer fraction<br /> [[Variables#Hout\|Hout(iMmass)]] == T ! bed layer mass<br /> [[Variables#Hout\|Hout(iMUbld)]] == T ! bed load at U-points<br /> [[Variables#Hout\|Hout(iMVbld)]] == T ! bed load at V-points</div>

			* Logical switches to activate writing of time-averaged, cohesive sediment fields into averages output file.
			:<div class="box"> [[Variables#Aout\|Aout(idmud)]] == T ! suspended concentration<br /> [[Variables#Aout\|Aout(iMUbld)]] == T ! bed load at U-points<br /> [[Variables#Aout\|Aout(iMVbld)]] == T ! bed load at V-points</div>

			* Logical switches to activate writing of time-averaged, cohesive sediment diagnostic terms into output diagnostics file.
			:<div class="box"> [[Variables#Dout\|Dout(MTrate)]] == T ! time rate of change<br /> [[Variables#Dout\|Dout(MThadv)]] == T ! horizontal total advection<br /> [[Variables#Dout\|Dout(MTxadv)]] == T ! horizontal XI-advection<br /> [[Variables#Dout\|Dout(MTyadv)]] == T ! horizontal ETA-advection<br /> [[Variables#Dout\|Dout(MTvadv)]] == T ! vertical advection<br /> [[Variables#Dout\|Dout(MThdif)]] == T ! horizontal total diffusion<br /> [[Variables#Dout\|Dout(MTxdif)]] == T ! horizontal XI-diffusion<br /> [[Variables#Dout\|Dout(MTydif)]] == T ! horizontal ETA-diffusion<br /> [[Variables#Dout\|Dout(MTsdif)]] == T ! horizontal S-diffusion<br /> [[Variables#Dout\|Dout(MTvdif)]] == T ! vertical diffusion</div>

	==Non-cohesive Sediment Parameters==		==Non-cohesive Sediment Parameters==
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	* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box">[[Variables#morph_fac\|SAND_MORPH_FAC]] == 1.0d0 ! nondimensional</div>		* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box">[[Variables#morph_fac\|SAND_MORPH_FAC]] == 1.0d0 ! nondimensional</div>

	* Logical switch ~~('''TRUE'''/'''FALSE''')~~ to specify which variables to consider on tracers point Sources/Sinks (like river runoff).<div class="box"> [[Variables#LtracerSrc\|SAND_Ltracer]] == F</div>		* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff).<div class="box"> [[Variables#LtracerSrc\|SAND_Ltracer]] == F</div>

			* Logical switches to activate writing of non-cohesive sediment into output history file.
			:<div class="box"> [[Variables#Hout\|Hout(idsand)]] == T ! suspended concentration<br /> [[Variables#Hout\|Hout(iSfrac)]] == T ! bed layer fraction<br /> [[Variables#Hout\|Hout(iSmass)]] == T ! bed layer mass<br /> [[Variables#Hout\|Hout(iSUbld)]] == T ! bed load at U-points<br /> [[Variables#Hout\|Hout(iSVbld)]] == T ! bed load at V-points</div>

			* Logical switches to activate writing of time-averaged, non-cohesive sediment fields into averages output file.
			:<div class="box"> [[Variables#Aout\|Aout(idsand)]] == T ! suspended concentration<br /> [[Variables#Aout\|Aout(iSUbld)]] == T ! bed load at U-points<br /> [[Variables#Aout\|Aout(iSVbld)]] == T ! bed load at V-points</div>

	* Logical switches ~~('''TRUE'''/'''FALSE''')~~ to activate writing of non-cohesive sediment ~~fields~~ into output ~~NetCDF~~ file~~(s)~~.<div class="box"> [[~~Hout~~\|~~Hout~~(~~isand~~)]] == T ! ~~suspended concentration~~<br /> [[~~Hout~~\|~~Hout~~(~~iSfrac~~)]] == T ! ~~bed layer fraction~~<br /> [[~~Hout~~\|~~Hout~~(~~iSmass~~)]] == T ! ~~bed layer mass~~<br /> [[~~Hout~~\|~~Hout~~(~~iSUbld~~)]] == T ! ~~bed load at U~~-~~points~~<br /> [[~~Hout~~\|~~Hout~~(~~iSVbld~~)]] == T ! ~~bed load at V~~-~~points~~</div>		* Logical switches to activate writing of time-averaged, non-cohesive sediment diagnostic terms into output diagnostics file.
			:<div class="box"> [[Variables#Dout\|Dout(STrate)]] == T ! time rate of change<br /> [[Variables#Dout\|Dout(SThadv)]] == T ! horizontal total advection<br /> [[Variables#Dout\|Dout(STxadv)]] == T ! horizontal XI-advection<br /> [[Variables#Dout\|Dout(STyadv)]] == T ! horizontal ETA-advection<br /> [[Variables#Dout\|Dout(STvadv)]] == T ! vertical advection<br /> [[Variables#Dout\|Dout(SThdif)]] == T ! horizontal total diffusion<br /> [[Variables#Dout\|Dout(STxdif)]] == T ! horizontal XI-diffusion<br /> [[Variables#Dout\|Dout(STydif)]] == T ! horizontal ETA-diffusion<br /> [[Variables#Dout\|Dout(STsdif)]] == T ! horizontal S-diffusion<br /> [[Variables#Dout\|Dout(STvdif)]] == T ! vertical diffusion</div>

	==Bed Layer and Bottom Sediment Parameters==		==Bed Layer and Bottom Sediment Parameters==

	* Logical switches ~~('''TRUE'''/'''FALSE''')~~ to activate writing of bed layer and bottom sediment fields into output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box"> [[Hout\|Hout(ithck)]] == T ! sediment layer thickness<br /> [[Hout\|Hout(iaged)]] == T ! sediment layer age<br /> [[Hout\|Hout(iporo)]] == T ! sediment layer porosity<br /> [[Hout\|Hout(idiff)]] == F ! biodiffusivity</div>		* Logical switches to activate writing of bed layer and bottom sediment fields into output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.
			:<div class="box"> [[Variables#Hout\|Hout(ithck)]] == T ! sediment layer thickness<br /> [[Variables#Hout\|Hout(iaged)]] == T ! sediment layer age<br /> [[Variables#Hout\|Hout(iporo)]] == T ! sediment layer porosity<br /> [[Variables#Hout\|Hout(idiff)]] == F ! biodiffusivity</div>

Robertson at 14:59, 4 December 2009

2009-12-04T14:59:17Z

← Older revision		Revision as of 14:59, 4 December 2009
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	==Sediment ~~model control switches~~==		==Sediment Model Control Switches==

	* Switch is used to control sediment model computation within nested and/or multiple connected grids, [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box"> [[Variables#Lsediment\|Lsediment]] == T</div>		* Switch is used to control sediment model computation within nested and/or multiple connected grids, [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box"> [[Variables#Lsediment\|Lsediment]] == T</div>

	==General ~~sediment bed model controls~~==		==General Sediment Bed Model Controls==

	* Depositional bed layer thickness (m) criteria to create a new layer. If deposition exceeds this value, then a new layer is created, [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box">[[Variables#newlayer_thick\|NEWLAYER_THICK]] == 0.01d0</div>		* Depositional bed layer thickness (m) criteria to create a new layer. If deposition exceeds this value, then a new layer is created, [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box">[[Variables#newlayer_thick\|NEWLAYER_THICK]] == 0.01d0</div>
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	* Logical switches ('''TRUE'''/'''FALSE''') to activate writing of non-cohesive sediment fields into output NetCDF file(s).<div class="box"> [[Hout\|Hout(isand)]] == T ! suspended concentration<br /> [[Hout\|Hout(iSfrac)]] == T ! bed layer fraction<br /> [[Hout\|Hout(iSmass)]] == T ! bed layer mass<br /> [[Hout\|Hout(iSUbld)]] == T ! bed load at U-points<br /> [[Hout\|Hout(iSVbld)]] == T ! bed load at V-points</div>		* Logical switches ('''TRUE'''/'''FALSE''') to activate writing of non-cohesive sediment fields into output NetCDF file(s).<div class="box"> [[Hout\|Hout(isand)]] == T ! suspended concentration<br /> [[Hout\|Hout(iSfrac)]] == T ! bed layer fraction<br /> [[Hout\|Hout(iSmass)]] == T ! bed layer mass<br /> [[Hout\|Hout(iSUbld)]] == T ! bed load at U-points<br /> [[Hout\|Hout(iSVbld)]] == T ! bed load at V-points</div>

	==Bed ~~layer~~ and ~~bottom sediment parameters~~==		==Bed Layer and Bottom Sediment Parameters==

	* Logical switches ('''TRUE'''/'''FALSE''') to activate writing of bed layer and bottom sediment fields into output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box"> [[Hout\|Hout(ithck)]] == T ! sediment layer thickness<br /> [[Hout\|Hout(iaged)]] == T ! sediment layer age<br /> [[Hout\|Hout(iporo)]] == T ! sediment layer porosity<br /> [[Hout\|Hout(idiff)]] == F ! biodiffusivity</div>		* Logical switches ('''TRUE'''/'''FALSE''') to activate writing of bed layer and bottom sediment fields into output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box"> [[Hout\|Hout(ithck)]] == T ! sediment layer thickness<br /> [[Hout\|Hout(iaged)]] == T ! sediment layer age<br /> [[Hout\|Hout(iporo)]] == T ! sediment layer porosity<br /> [[Hout\|Hout(idiff)]] == F ! biodiffusivity</div>

← Older revision		Revision as of 16:23, 16 February 2018
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	* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff). [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.		* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff). [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
	:<div class="box"> [[Variables#LtracerSrc\|~~MUD_Ltsrc~~]] == F</div>		:<div class="box"> [[Variables#LtracerSrc\|SAND_Ltsrc]] == F</div>

	*Logical switches to specify which variables to process for tracers climatology: [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.		*Logical switches to specify which variables to process for tracers climatology: [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.

← Older revision		Revision as of 17:57, 29 November 2012
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	* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box"> [[Variables#morph_fac\|MUD_MORPH_FAC]] == 1.0d0 1.0d0 ! nondimensional</div>		* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box"> [[Variables#morph_fac\|MUD_MORPH_FAC]] == 1.0d0 1.0d0 ! nondimensional</div>

	* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff).		*Logical switches to specify which variables to process for tracers climatology: [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
	:<div class="box"> [[Variables#LtracerSrc\|~~MUD_Ltracer~~]] == F F</div>		:<div class="box"> [[Variables#MUD_Ltclm\|MUD_Ltclm]] == F</div>

			* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff). [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
			:<div class="box"> [[Variables#LtracerSrc\|MUD_Ltsrc]] == F</div>

	* Logical switches to activate writing of cohesive sediment into output history file.		* Logical switches to activate writing of cohesive sediment into output history file.
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	* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box">[[Variables#morph_fac\|SAND_MORPH_FAC]] == 1.0d0 ! nondimensional</div>		* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box">[[Variables#morph_fac\|SAND_MORPH_FAC]] == 1.0d0 ! nondimensional</div>

	* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff).<div class="box"> [[Variables#LtracerSrc\|~~SAND_Ltracer~~]] == F</div>		*Logical switches to specify which variables to process for tracers climatology: [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
			:<div class="box"> [[Variables#SAND_Ltclm\|SAND_Ltclm]] == F</div>

			* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff). [1:[[Variables#NCS\|NCS]],[[Variables#Ngrids\|Ngrids]]] values expected.
			:<div class="box"> [[Variables#LtracerSrc\|MUD_Ltsrc]] == F</div>

	* Logical switches to activate writing of non-cohesive sediment into output history file.		* Logical switches to activate writing of non-cohesive sediment into output history file.

← Older revision		Revision as of 19:38, 26 May 2010
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	* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box"> [[Variables#morph_fac\|MUD_MORPH_FAC]] == 1.0d0 1.0d0 ! nondimensional</div>		* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box"> [[Variables#morph_fac\|MUD_MORPH_FAC]] == 1.0d0 1.0d0 ! nondimensional</div>

	* Logical switch ~~('''TRUE'''/'''FALSE''')~~ to specify which variables to consider on tracers point Sources/Sinks (like river runoff).<div class="box"> [[Variables#LtracerSrc\|MUD_Ltracer]] == F F</div>		* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff).
			:<div class="box"> [[Variables#LtracerSrc\|MUD_Ltracer]] == F F</div>

	* Logical ~~switch ('''TRUE'''/'''FALSE''')~~ to activate writing of cohesive sediment into output ~~NetCDF~~ file~~(s)~~.<div class="box"> [[Hout\|Hout(idmud)]] == T ! suspended concentration<br /> [[Hout\|Hout(iMfrac)]] == T ! bed layer fraction<br /> [[Hout\|Hout(iMmass)]] == T ! bed layer mass<br /> [[Hout\|Hout(iMUbld)]] == T ! bed load at U-points<br /> [[Hout\|Hout(iMVbld)]] == T ! bed load at V-points</div>		* Logical switches to activate writing of cohesive sediment into output history file.
			:<div class="box"> [[Variables#Hout\|Hout(idmud)]] == T ! suspended concentration<br /> [[Variables#Hout\|Hout(iMfrac)]] == T ! bed layer fraction<br /> [[Variables#Hout\|Hout(iMmass)]] == T ! bed layer mass<br /> [[Variables#Hout\|Hout(iMUbld)]] == T ! bed load at U-points<br /> [[Variables#Hout\|Hout(iMVbld)]] == T ! bed load at V-points</div>

			* Logical switches to activate writing of time-averaged, cohesive sediment fields into averages output file.
			:<div class="box"> [[Variables#Aout\|Aout(idmud)]] == T ! suspended concentration<br /> [[Variables#Aout\|Aout(iMUbld)]] == T ! bed load at U-points<br /> [[Variables#Aout\|Aout(iMVbld)]] == T ! bed load at V-points</div>

			* Logical switches to activate writing of time-averaged, cohesive sediment diagnostic terms into output diagnostics file.
			:<div class="box"> [[Variables#Dout\|Dout(MTrate)]] == T ! time rate of change<br /> [[Variables#Dout\|Dout(MThadv)]] == T ! horizontal total advection<br /> [[Variables#Dout\|Dout(MTxadv)]] == T ! horizontal XI-advection<br /> [[Variables#Dout\|Dout(MTyadv)]] == T ! horizontal ETA-advection<br /> [[Variables#Dout\|Dout(MTvadv)]] == T ! vertical advection<br /> [[Variables#Dout\|Dout(MThdif)]] == T ! horizontal total diffusion<br /> [[Variables#Dout\|Dout(MTxdif)]] == T ! horizontal XI-diffusion<br /> [[Variables#Dout\|Dout(MTydif)]] == T ! horizontal ETA-diffusion<br /> [[Variables#Dout\|Dout(MTsdif)]] == T ! horizontal S-diffusion<br /> [[Variables#Dout\|Dout(MTvdif)]] == T ! vertical diffusion</div>

	==Non-cohesive Sediment Parameters==		==Non-cohesive Sediment Parameters==
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	* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box">[[Variables#morph_fac\|SAND_MORPH_FAC]] == 1.0d0 ! nondimensional</div>		* Morphological time scale factor (greater than or equal to 1.0). A value of 1.0 has no scale effect.<div class="box">[[Variables#morph_fac\|SAND_MORPH_FAC]] == 1.0d0 ! nondimensional</div>

	* Logical switch ~~('''TRUE'''/'''FALSE''')~~ to specify which variables to consider on tracers point Sources/Sinks (like river runoff).<div class="box"> [[Variables#LtracerSrc\|SAND_Ltracer]] == F</div>		* Logical switch to specify which variables to consider on tracers point Sources/Sinks (like river runoff).<div class="box"> [[Variables#LtracerSrc\|SAND_Ltracer]] == F</div>

			* Logical switches to activate writing of non-cohesive sediment into output history file.
			:<div class="box"> [[Variables#Hout\|Hout(idsand)]] == T ! suspended concentration<br /> [[Variables#Hout\|Hout(iSfrac)]] == T ! bed layer fraction<br /> [[Variables#Hout\|Hout(iSmass)]] == T ! bed layer mass<br /> [[Variables#Hout\|Hout(iSUbld)]] == T ! bed load at U-points<br /> [[Variables#Hout\|Hout(iSVbld)]] == T ! bed load at V-points</div>

			* Logical switches to activate writing of time-averaged, non-cohesive sediment fields into averages output file.
			:<div class="box"> [[Variables#Aout\|Aout(idsand)]] == T ! suspended concentration<br /> [[Variables#Aout\|Aout(iSUbld)]] == T ! bed load at U-points<br /> [[Variables#Aout\|Aout(iSVbld)]] == T ! bed load at V-points</div>

	* Logical switches ~~('''TRUE'''/'''FALSE''')~~ to activate writing of non-cohesive sediment ~~fields~~ into output ~~NetCDF~~ file~~(s)~~.<div class="box"> [[~~Hout~~\|~~Hout~~(~~isand~~)]] == T ! ~~suspended concentration~~<br /> [[~~Hout~~\|~~Hout~~(~~iSfrac~~)]] == T ! ~~bed layer fraction~~<br /> [[~~Hout~~\|~~Hout~~(~~iSmass~~)]] == T ! ~~bed layer mass~~<br /> [[~~Hout~~\|~~Hout~~(~~iSUbld~~)]] == T ! ~~bed load at U~~-~~points~~<br /> [[~~Hout~~\|~~Hout~~(~~iSVbld~~)]] == T ! ~~bed load at V~~-~~points~~</div>		* Logical switches to activate writing of time-averaged, non-cohesive sediment diagnostic terms into output diagnostics file.
			:<div class="box"> [[Variables#Dout\|Dout(STrate)]] == T ! time rate of change<br /> [[Variables#Dout\|Dout(SThadv)]] == T ! horizontal total advection<br /> [[Variables#Dout\|Dout(STxadv)]] == T ! horizontal XI-advection<br /> [[Variables#Dout\|Dout(STyadv)]] == T ! horizontal ETA-advection<br /> [[Variables#Dout\|Dout(STvadv)]] == T ! vertical advection<br /> [[Variables#Dout\|Dout(SThdif)]] == T ! horizontal total diffusion<br /> [[Variables#Dout\|Dout(STxdif)]] == T ! horizontal XI-diffusion<br /> [[Variables#Dout\|Dout(STydif)]] == T ! horizontal ETA-diffusion<br /> [[Variables#Dout\|Dout(STsdif)]] == T ! horizontal S-diffusion<br /> [[Variables#Dout\|Dout(STvdif)]] == T ! vertical diffusion</div>

	==Bed Layer and Bottom Sediment Parameters==		==Bed Layer and Bottom Sediment Parameters==

	* Logical switches ~~('''TRUE'''/'''FALSE''')~~ to activate writing of bed layer and bottom sediment fields into output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.<div class="box"> [[Hout\|Hout(ithck)]] == T ! sediment layer thickness<br /> [[Hout\|Hout(iaged)]] == T ! sediment layer age<br /> [[Hout\|Hout(iporo)]] == T ! sediment layer porosity<br /> [[Hout\|Hout(idiff)]] == F ! biodiffusivity</div>		* Logical switches to activate writing of bed layer and bottom sediment fields into output NetCDF file(s), [1:[[Variables#Ngrids\|Ngrids]]] values are expected.
			:<div class="box"> [[Variables#Hout\|Hout(ithck)]] == T ! sediment layer thickness<br /> [[Variables#Hout\|Hout(iaged)]] == T ! sediment layer age<br /> [[Variables#Hout\|Hout(iporo)]] == T ! sediment layer porosity<br /> [[Variables#Hout\|Hout(idiff)]] == F ! biodiffusivity</div>