TOMS Bibliography
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Authors: Allen, S.E., M.S. Dinniman, J.M. Klinck, B.M. Hickey, D.D. Gorby, A.J. Hewett Date: 2003 Title: On vertical advection truncation errors in terrain following numerical models: Comparison to a laboratory model for upwelling over submarine canyons Journal:Journal of Geophysical Research Volume: 108 Issue: C1 Pages: 3003 Status: Published PDF Link:PDF
Authors: Arango, H.G., A.M. Moore, A.J. Miller, B.D. Cornuelle, E.Di Lorenzo, and D.J. Neilson Date: 2004 Title: The ROMS Tangent Linear and Adjoint Models: A comprehensive ocean prediction and analysis system PDF Link:PDF
Authors: Broquet, Grégoire, Andrew M. Moore, Hernan G. Arango, Christopher A. Edwards and Brian S. Powell Date: 2009 Title: Ocean State and Surface Forcing Correction using the ROMS-IS4DVAR Data Assimilation System Journal:Mercator Ocean Quarterly Newsletter Issue: 34 Pages: 5-13 Status: Published PDF Link:PDF
Authors: Capet, X., J. C. McWilliams, M.J. Molemaker, and A.F. Shchepetkin Date: 2008 Title: Mesoscale to Submesoscale Transition in the California Current System. Part I: Flow Structure, Eddy Flux, and Observational Tests Journal:Journal of Physical Oceanography (JPO) Volume: 38 Issue: 1 Pages: 29-43 Status: Published PDF Link:PDF
Authors: Capet, X., J. C. McWilliams, M.J. Molemaker, and A.F. Shchepetkin Date: 2008 Title: Mesoscale to Submesoscale Transition in the California Current System. Part II: Frontal Processes Journal:Journal of Physical Oceanography (JPO) Volume: 38 Issue: 1 Pages: 44-64 Status: Published PDF Link:PDF
Authors: Chassignet, E.P., H.G. Arango, D. Dietrich, T. Ezer, M. Ghil, D.B. Haidvogel C.-C. Ma, A. Mehra, A.M. Paiva, Z. Sirkes Date: 2000 Title: DAMEE-NAB: The Base Experiments Journal:Dynamics of Atmospheres and Oceans Volume: 32 Issue: 3-4 Pages: 155-183 Status: Published PDF Link:PDF
Authors: Di Lorenzo, E., J. Fiechter, N. Schneider, A. Bracco, A. J. Miller, P. J. S. Franks, S. J. Bograd, A. M. Moore, A. C. Thomas, W. Crawford, A. Peña, and A. J. Hermann Date: 2009 Title: Nutrient and Salinity Low-Frequency Variations in the central and eastern North Pacific Journal:Geophysical Research Letters Volume: 36 Issue: 14 Pages: L14601 Status: Published PDF Link:PDF
Authors: Di Lorenzo, E., N. Schneider, K. M. Cobb, P. J. S. Franks, K. Chhak, A. J. Miller, J. C. McWilliams, S. J. Bograd, H. Arango, E. Curchitser, T. M. Powell, P. Rivière Date: 2008 Title: North Pacific Gyre Oscillation links ocean climate and ecosystem change Journal:Geophysical Research Letters Volume: 35 Issue: L8 Pages: L08607 Status: Published PDF Link:PDF
Authors: Di Lorenzo, Emanuele, Andrew M. Moore, Hernan G. Arango, Bruce D. Cornuelle, Arthur J. Miller, Brian Powell, Boon S. Chua, Andrew F. Bennett Date: 2007 Title: Weak and strong constraint data assimilation in the inverse Regional Ocean Modeling System (ROMS): Development and application for a baroclinic coastal upwelling system Journal:Ocean Modelling Volume: 16 Issue: 3-4 Pages: 160-187 Status: Published PDF Link:PDF
Authors: Dinniman, M.S. and J.M. Klinck Date: 2002 Title: The influence of open versus periodic alongshore boundaries on circulations near submarine canyons Journal:Journal of Atmospheric and Oceanic Technology (JTECH) Volume: 19 Issue: 10 Pages: 1722-1737 Status: Published PDF Link:PDF
Authors: Dinniman, M.S. and J.M. Klinck Date: 2004 Title: A model study of circulation and cross shelf exchange on the west Antarctic Peninsula continental shelf Journal:Deep-Sea Research Part II: Topical Studies in Oceanography Volume: 51 Issue: 17-19 Pages: 2003-2022 Status: Published PDF Link:PDF
Authors: Dinniman, M.S., J.M. Klinck and W.O. Smith, Jr. Date: 2003 Title: Cross shelf exchange in a model of the Ross Sea circulation and biogeochemistry Journal:Deep-Sea Research Part II: Topical Studies in Oceanography Volume: 50 Issue: 22-26 Pages: 3103-3120 Status: Published PDF Link:PDF
Authors: Durski, S.M., S.M. Glenn, D.B. Haidvogel Date: 2004 Title: Vertical mixing schemes in the coastal ocean: Comparison of the Level 2.5 Mellor-Yamada scheme with an enhanced version of the K-profile parameterization Journal:Journal of Geophysical Research Volume: 109 Issue: C1 Pages: C01015 Status: Published PDF Link:PDF
Authors: Dutour Sikiric, Mathieu, Ivica Janekovic, and Milivoj Kuzmic Date: 2009 Title: A new approach to bathymetry smoothing in sigma-coordinate ocean models Journal:Ocean Modelling Volume: 29 Issue: 2 Pages: 128-136 Status: Published PDF Link:PDF
Authors: Ezer, T., H.G. Arango and A.F. Shchepetkin Date: 2002 Title: Developments in terrain-following ocean models: intercomparisons of numerical aspects Journal:Ocean Modelling Volume: 4 Issue: 3-4 Pages: 249-267 Status: Published PDF Link:PDF
Authors: Fennel, K., J. Wilkin, J. Levin, J. Moisan, J. O'Reilly, and D. Haidvogel Date: 2006 Title: Nitrogen cycling in the Middle Atlantic Bight: Results from a three-dimensional model and implications for the North Atlantic nitrogen budget Journal:Global Biogeochemical Cycles Volume: 20 Issue: GB3 Pages: GB3007 Status: Published PDF Link:PDF
Authors: Fennel, K., J. Wilkin, M. Previdi, R. Najjar Date: 2008 Title: Denitrification effects on air-sea CO2 flux in the coastal ocean: Simulations for the Northwest North Atlantic Journal:Geophysical Research Letters Volume: 35 Pages: L24608 Status: Published PDF Link:PDF
Authors: Fiechter, J., A.M. Moore, C.A. Edwards, K.W. Bruland, E. Di Lorenzo, C.V.W. Lewis, T.M. Powell, E. Curchitser, and K. Hedstrom Date: 2009 Title: Modeling iron limitation of primary production in the coastal Gulf of Alaska Journal:Deep-Sea Research Part II: Topical Studies in Oceanography Volume: 56 Issue: 24 Pages: 2503-2519 Status: Published PDF Link:PDF
Authors: Haidvogel, D.B., H. Arango, W.P. Budgell, B.D. Cornuelle, E. Curchitser, E. Di Lorenzo, K. Fennel, W.R. Geyer, A.J. Hermann, L. Lanerolle, J. Levin, J.C. McWilliams, A.J. Miller, A.M. Moore, T.M. Powell, A.F. Shchepetkin, C.R. Sherwood, R.P. Signell, J.C. Warner, J. Wilkin Date: 2008 Title: Ocean forecasting in terrain-following coordinates: Formulation and skill assessment of the Regional Ocean Modeling System Journal:Journal of Computational Physics Volume: 227 Issue: 7 Pages: 3595-3624 Status: Published PDF Link:PDF
Authors: Haidvogel, D.B., H.G. Arango, K. Hedstrom, A. Beckmann, P. Malanotte-Rizzoli, and A.F. Shchepetkin Date: 2000 Title: Model Evaluation Experiments in the North Atlantic Basin: Simulations in Nonlinear Terrain-Following Coordinates Journal:Dynamics of Atmospheres and Oceans Volume: 32 Issue: 3-4 Pages: 239-281 Status: Published PDF Link:PDF
Authors: Hermann, A. J., E. N. Curchitser, D. B. Haidvogel and E. L. Dobbins Date: 2009 Title: A comparison of remote versus local influence of El Nino on the coastal circulation of the Northeast Pacific Journal:Deep-Sea Research Part II: Topical Studies in Oceanography Volume: 56 Issue: 24 Pages: 2427-2443 Status: Published PDF Link:PDF
Authors: Hermann, A.J., S. Hinckley, E. L. Dobbins, D. B. Haidvogel, N. A. Bond, C. Mordy, N. Kachel and P. J. Stabeno Date: 2009 Title: Quantifying cross-shelf and vertical nutrient flux in the Gulf of Alaska with a spatially nested, coupled biophysical model Journal:Deep-Sea Research Part II: Topical Studies in Oceanography Volume: 56 Issue: 24 Pages: 2474-2486 Status: Published PDF Link:PDF
Authors: Hinckley, S., J.M. Napp, A.J. Hermann and C. Parada Date: 2009 Title: Simulation of physically-mediated variability in prey resources for a larval fish - a 3-dimensional NPZ model Journal:Fisheries Oceanography Volume: 18 Issue: 4 Pages: 201-223 Status: Published PDF Link:PDF
Authors: Hinckley, S., K. O. Coyle, G. Gibson, A. J. Hermann, and E. L. Dobbins Date: 2009 Title: A biophysical NPZ model with iron for the Gulf of Alaska: Reproducing the differences between an oceanic HNLC ecosystem and a classical northern temperate shelf ecosystem Journal:Deep-Sea Research Part II: Topical Studies in Oceanography Volume: 56 Issue: 24 Pages: 2520-2536 Status: Published PDF Link:PDF
Authors: Klinck, J.M., J. She, and B.M. Hickey Date: 2000 Title: Flow near submarine canyons driven by transient winds Journal:Journal of Geophysical Research Status: Revised and re-submitted
Authors: Kumar, Nirnimesh, George Voulgaris, John C. Warner, and Maitane Olabarrieta Date: 2012 Title: Implementation of the vortex force formalism in the coupled ocean-atmosphere-wave-sediment transport (COAWST) modeling system for inner shelf and surf zone applications Journal:Ocean Modelling Volume: 47 Pages: 65-95 Status: Published PDF Link:PDF
Authors: Kösters, F., R. Käse, Kevin Fleming, and D. Wolf Date: 0000 Title: Denmark Strait overflow for Last Glacial Maximum to Holocene conditions Volume: 19 Status: Published HTML Link:HTML
Authors: Lutjeharms, J.R.E., P. Penven and C. Roy Date: 2002 Title: Shear edge eddies of the southern Agulhas Current Journal:Continental Shelf Research Volume: 23 Issue: 11-13 Pages: 1099-1115 Status: Published PDF Link:PDF
Authors: MacCready, P. and W.R. Geyer, Date: 2001 Title: Estuarine salt flux through an isohaline surface Journal:Journal of Geophysical Research Volume: 106 Issue: C6 Pages: 11629-11637 Status: Published PDF Link:PDF
Authors: Malanotte-Rizzoli, P., K. Hedstrom, H.G. Arango, and D.B. Haidvogel, Date: 2000 Title: Water mass pathways between the subtropical and tropical ocean in a climatological simulation of the North Atlantic ocean circulation Journal:Dynamics of Atmospheres and Oceans Volume: 32 Issue: 3-4 Pages: 331-371 Status: Published PDF Link:PDF
Authors: Marchesiello, P., J.C. McWilliams, A.F. Shchepetkin Date: 2001 Title: Open boundary conditions for long-term integration of regional ocean models Journal:Ocean Modelling Volume: 3 Issue: 1-2 Pages: 1-20 Status: Published PDF Link:PDF
Authors: Miller, Arthur J., Douglas J. Neilson, Douglas S. Luther, Myrl C. Hendershott, Bruce D. Cornuelle, Peter F. Worcester, Matthew A. Dzieciuch, Brian D. Dushaw, Bruce M. Howe, Julia C. Levin, Hernan G. Arango, and Dale B. Haidvogel Date: 2007 Title: Barotropic Rossby wave radiation from a model Gulf Stream Journal:Geophysical Research Letters Volume: 34 Issue: L23 Pages: L23613 Status: Published PDF Link:PDF
Authors: Moore, A.M., H.G. Arango, A.J. Miller, B.D. Cornuelle, E. Di Lorenzo and D.J. Neilson Date: 2004 Title: A Comprehensive Ocean Prediction and Analysis System Based on the Tangent Linear and Adjoint Components of a Regional Ocean Model Journal:Ocean Modelling Volume: 7 Issue: 1-2 Pages: 227-258 Status: Published PDF Link:PDF
Authors: Moore, A.M., H.G. Arango, G. Broquet, B.S. Powell, A.T. Weaver, and J. Zavala-Garay Date: 2011 Title: The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilations systems, Part I - System overview and formulation Journal:Progress in Oceanography Volume: 91 Pages: 34-49 Status: Published PDF Link:PDF
Authors: Moore, A.M., H.G. Arango, G. Broquet, C. Edward, M. Veneziani, B. Powell, D. Foley, J.D. Doyle, D. Costa, and P. Robinson Date: 2011 Title: The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilations systems, Part II – Performance and application to the California Current System Journal:Progress in Oceanography Volume: 91 Pages: 50-73 Status: Published PDF Link:PDF
Authors: Moore, A.M., H.G. Arango, G. Broquet, C. Edward, M. Veneziani, B. Powell, D. Foley, J.D. Doyle, D. Costa, and P. Robinson Date: 2011 Title: The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilations systems, Part III - Observation impact and observation sensitivity in the California Current Journal:Progress in Oceanography Volume: 91 Pages: 74-94 Status: Published PDF Link:PDF
Authors: Peliz, A., J. Dubert, D. B. Haidvogel Date: 2003 Title: Subinertial Response of a Density-Driven Eastern Boundary Poleward Current to Wind Forcing Journal:Journal of Physical Oceanography (JPO) Volume: 33 Issue: 8 Pages: 1633-1650 Status: Published PDF Link:PDF
Authors: Peliz, A., J. Dubert, D.B. Haidvogel, and B. Le Cann Date: 2003 Title: Generation and unstable evolution of a density-driven Eastern Poleward Current: The Iberian Poleward Current Journal:Journal of Geophysical Research Volume: 108 Issue: C8 Pages: 3268 Status: Published PDF Link:PDF
Authors: Penven, P., C. Roy, A. Colin de Verdiere and J. Largier Date: 2000 Title: Simulation and quantification of a coastal jet retention process using a barotropic model Journal:Oceanologica Acta Volume: 23 Issue: 5 Pages: 615-634 Status: Published PDF Link:PDF
Authors: Penven, P., C. Roy, J.R.E. Lutjeharms, A. Colin de Verdiere, A. Johnson, F. Shillington, P. Freon and G. Brundrit, Date: 2001 Title: A regional hydrodynamic model of the Southern Benguela Journal:South African Journal of Science Volume: 97 Issue: 11 &12 Pages: 472-476 Status: Published PDF Link:PDF
Authors: Penven, P., J.R.E. Lutjeharms, P. Marchesiello, C. Roy and S.J. Weeks Date: 2001 Title: Generation of cyclonic eddies by the Agulhas Current in the lee of the Agulhas Bank Journal:Geophysical Research Letters Volume: 28 Issue: 6 Pages: 1055-1058 Status: Published PDF Link:PDF
Authors: Robertson, Robin Date: 2006 Title: Modeling internal tides over Fieberling Guyot: resolution, parameterization, performance Journal:Ocean Dynamics Volume: 56 Issue: 5-6 Pages: 430-444 Status: Published PDF Link:PDF
Authors: Shchepetkin, A.F. and J.C. McWilliams Date: 2005 Title: The Regional Ocean Modeling System (ROMS): A split-explicit, free-surface, topography-following coordinates ocean model Journal:Ocean Modelling Volume: 9 Issue: 4 Pages: 347-404 Status: Published PDF Link:PDF
Authors: Shchepetkin, A.F. and J.C. McWilliams Date: 2003 Title: A Method for Computing Horizontal Pressure-Gradient Force in an Oceanic Model with a Non-Aligned Vertical Coordinate Journal:Journal of Geophysical Research Volume: 108 Issue: C3 Pages: 3090 Status: Published PDF Link:PDF
Authors: She, J. and J.M. Klinck Date: 2000 Title: Flow near submarine canyons driven by constant winds Journal:Journal of Geophysical Research Volume: 105 Issue: C12 Pages: 28671-28694 Status: Published PDF Link:PDF
Authors: Smith, W.O., Jr., M.S. Dinniman, J.M. Klinck and E.E. Hofmann Date: 2003 Title: Biogeochemical Climatologies of the Ross Sea, Antarctica: Seasonal Patterns of Nutrients and Biomass Journal:Deep-Sea Research Part II: Topical Studies in Oceanography Volume: 50 Issue: 22-26 Pages: 3083-3101 Status: Published PDF Link:PDF
Authors: Warner, John C., Christopher R. Sherwood, Hernan G. Arango, Richard P. Signell Date: 2005 Title: Performance of Four Turbulence Closure Methods Implemented Using a Generic Length Scale Method Journal:Ocean Modelling Volume: 8 Issue: 1-2 Pages: 81-113 Status: Published PDF Link:PDF
Authors: Warner, John C., Christopher R. Sherwood, Richard P. Signell, Courtney K. Harris, Hernan G. Arango Date: 2008 Title: Development of a three-dimensional, regional, coupled wave, current, and sediment-transport model Journal:Computers & Geoscience Volume: 34 Issue: 10 Pages: 1284-1306 Status: Published PDF Link:PDF
Authors: Wilkin, J.L, H.G. Arango, D.B. Haidvogel, C.S. Lichtenwalner, S.M. Glenn, and K.S. Hedstrom Date: 2005 Title: A Regional Ocean Modeling System for the Long-term Ecosystem Laboratory Journal:Journal of Geophysical Research Volume: 110 Issue: C6 Pages: C06S91 Status: Published PDF Link:PDF
Authors: Williams, W., T. Weingartner, and A. Hermann Date: 2009 Title: Idealized 2-dimensional modeling of a coastal buoyancy front under downwelling-favourable wind-forcing with application to the Alaska Coastal Current Journal:Journal of Physical Oceanography (JPO) Status: Submitted
Authors: Williams, W., T. Weingartner, and A. Hermann Date: 2007 Title: Idealized Modeling of Seasonal Variation in the Alaska Coastal Current Journal:Journal of Geophysical Research Volume: 112 Issue: 7 Pages: C07001 Status: Published PDF Link:PDF