Search found 11 matches

by xinwang
Tue Dec 04, 2012 8:47 pm
Forum: ROMS Installation
Topic: upwelling case paralleling compilation with ftn
Replies: 3
Views: 3618

Re: upwelling case paralleling compilation with ftn

You are right. This is first time for me to use Linux Cray. Thanks for your reply. Now, I can compile successfully in parallel using ftn, and create an executable file (oceanG). I try to aprun and mpirun, but it is said that 'command not found'. Which command can be used to run executable file? Many...
by xinwang
Tue Dec 04, 2012 4:13 pm
Forum: ROMS Installation
Topic: upwelling case paralleling compilation with ftn
Replies: 3
Views: 3618

upwelling case paralleling compilation with ftn

The system suggests me to use 'ftn' and module command.I module netcdf and esmf. The following is my build.sh set parallel = 0 set clean = 1 while ( ($#argv) > 0 ) switch ($1) case "-noclean" shift set clean = 0 breaksw case "-j" shift set parallel = 1 if (`echo $1 | grep -P '^\d...
by xinwang
Fri Oct 19, 2012 8:32 pm
Forum: ROMS Installation
Topic: upwelling case in paralleling compilation
Replies: 3
Views: 2939

Re: upwelling case in paralleling compilation

now,I set 'setenv USE_MPIF90 on # compile with mpif90 script '. However, there is still error as the following. makefile:238: INCLUDING FILE /ncrc/home2/Xin.Wang/make_macros.mk WHICH CONTAINS APPLICATION-DEPENDENT MAKE DEFINITIONS which: no mpif90 in (/opt/pgisoft/mpich2/bin:/opt/cray/atp/1.4.4/bin:...
by xinwang
Fri Oct 19, 2012 7:55 pm
Forum: ROMS Installation
Topic: upwelling case in paralleling compilation
Replies: 3
Views: 2939

upwelling case in paralleling compilation

I want to compile upwelling case in paralleling. When running ./build.sh, it is displaying "roms_projects/upwelling_pgi_netcdf4_parallel> ./build.sh -j 16 > txt makefile:238: INCLUDING FILE /ncrc/home2/Xin.Wang/make_macros.mk WHICH CONTAINS APPLICATION-DEPENDENT MAKE DEFINITIONS makefile:234: I...
by xinwang
Mon Oct 15, 2012 3:22 pm
Forum: ROMS Installation
Topic: problem of upwelling case with netcdf4
Replies: 3
Views: 3724

Re: problem of upwelling case with netcdf4

Hi Kate,
The problem has been solved. Thanks for your help!
by xinwang
Mon Oct 15, 2012 3:04 pm
Forum: ROMS Installation
Topic: problem of upwelling case with netcdf4
Replies: 3
Views: 3724

Re: problem of upwelling case with netcdf4

Hi Kate, I got
roms_projects/upwelling_pgi_netcdf4> nc-config --flibs
-L/opt/cray/netcdf/4.2.0/pgi/119/lib @NC_FLIBS@

Is it normal?
by xinwang
Fri Oct 12, 2012 8:53 pm
Forum: ROMS Installation
Topic: problem of upwelling case with netcdf4
Replies: 3
Views: 3724

problem of upwelling case with netcdf4

Upwelling case can work well when setting FORT to pgi and netcdf-pgi-3.6.2. However, when I set "setenv USE_NETCDF4 on", and change accordingly "setenv NC_CONFIG /opt/cray/netcdf/4.2.0/pgi/119/bin/nc-config setenv NETCDF_INCDIR /opt/cray/netcdf/4.2.0/pgi/119/include", it is displ...
by xinwang
Thu Oct 11, 2012 9:51 pm
Forum: ROMS Installation
Topic: problem in test case of upwelling
Replies: 8
Views: 5253

Re: problem in test case of upwelling

Thanks to Kate for your kind and patient answers.
Now, ROMS can run successfully.
by xinwang
Thu Oct 11, 2012 5:00 pm
Forum: ROMS Installation
Topic: problem in test case of upwelling
Replies: 8
Views: 5253

Re: problem in test case of upwelling

Thank you, Kate. I input the following commands: "module load intel/12.0.5.220" and "module load netcdf/3.6.2a" . But there is still an error listing in the following. I have no idea how use the module files built to build ROMS. Am I wrong in setting netcdf? Can you tell me more ...
by xinwang
Thu Oct 11, 2012 1:32 pm
Forum: ROMS Installation
Topic: problem in test case of upwelling
Replies: 8
Views: 5253

Re: problem in test case of upwelling

Thanks to François for your suggestion. I will check the compiler.
by xinwang
Wed Oct 10, 2012 9:56 pm
Forum: ROMS Installation
Topic: problem in test case of upwelling
Replies: 8
Views: 5253

problem in test case of upwelling

hello, every one. I am fresh man using ROMS, and met a problem. I have installed ROMS in gaea, a system of noaa. The build.sh is changed as the tutorial(using netcdf-pgi-3.6.2). When running build.sh, there is an error. The following is the displaying after running build.sh. Thanks for your help. rm...