Search found 34 matches

by angelolemos
Thu Dec 15, 2016 4:04 pm
Forum: ROMS Discussion
Topic: unable to define variable
Replies: 2
Views: 931

Re: unable to define variable

Hi Kate,

I followed your suggestion in the previous post and my problem was solved when I changed:

from: character (len=1024) :: string

to: character (len=4096) :: string

And after I ran the application again: ./build.bash -f and mpirun -np 54 ./oceanM ocean_river.in.

Thank you.
by angelolemos
Thu Dec 15, 2016 12:09 pm
Forum: ROMS Discussion
Topic: unable to define variable
Replies: 2
Views: 931

unable to define variable

Hi everyone, I am having problems running my application when I increase the input file number. I knwo there is a limit (https://www.myroms.org/forum/viewtopic.php?f=14&t=4323&p=16638&hilit=forcing+input+file+limit#p16638), and I have fixed that question changing the Cval dimension in the files: /RO...
by angelolemos
Tue Oct 18, 2016 7:01 pm
Forum: ROMS Discussion
Topic: Input files
Replies: 10
Views: 2838

Re: Input files

Thank you Kate, my input files are working now.
by angelolemos
Thu Oct 13, 2016 11:19 am
Forum: ROMS Discussion
Topic: Input files
Replies: 10
Views: 2838

Re: Input files

Yes, I tried to change from 200 to 400, but unfortunately didn't work.

/src/ROMS/Utility/read_phypar.F
line 95

from
character (len=256), dimension(200) :: Cval

to
character (len=256), dimension(400) :: Cval

Maybe is necessary changing something else, I don't know.
by angelolemos
Wed Oct 12, 2016 7:50 pm
Forum: ROMS Discussion
Topic: Input files
Replies: 10
Views: 2838

Re: Input files

Thank you Kate,

I have 200 files from Y2008M10 until Y2010M5, and if I include one more the error appears.
Should I reduce the number of input files or there is some way to change read_phypar.F?
Thank you again.
by angelolemos
Tue Oct 11, 2016 10:20 pm
Forum: ROMS Discussion
Topic: Input files
Replies: 10
Views: 2838

Input files

Hi all, I wonder if there is a limit of input files in the roms.in. I have created my input files in the same way and included in the roms.in, as follow: BRYNAME == ./input/roms_bry_HYCOM_Y2008M10.nc | ./input/roms_bry_HYCOM_Y2008M11.nc | ./input/roms_bry_HYCOM_Y2008M12.nc | ./input/roms_bry_HYCOM_Y...
by angelolemos
Wed Sep 21, 2016 8:56 pm
Forum: ROMS Discussion
Topic: Blowing-up problem: Bulk_fluxes
Replies: 6
Views: 1981

Re: Blowing-up problem: Bulk_fluxes

Hi,

Thank you so much, your suggestion about the rain fall solved my problem.
Actually, my rain fall input data were wrong, they were in mm/day, and not in kg m-2 s-1.
My experiment is going very well.
Thank you again. :wink:
by angelolemos
Wed Sep 14, 2016 7:49 pm
Forum: ROMS Discussion
Topic: Blowing-up problem: Bulk_fluxes
Replies: 6
Views: 1981

Re: Blowing-up problem: Bulk_fluxes

Hi all, In order to facilitate the understanding of my input data, I have selected a point in the deep ocean (-37.792; -15.138) to show the time series of all my input data requested by ROMS in the simulating using BULK_FLUXES option, as I showed in my first post. I attached two plots of them. About...
by angelolemos
Tue Sep 13, 2016 12:28 am
Forum: ROMS Discussion
Topic: Blowing-up problem: Bulk_fluxes
Replies: 6
Views: 1981

Re: Blowing-up problem: Bulk_fluxes

Hi Kate, Sorry, I did not say my units in the post. I have checked all my variables and units, and if they are according to the varinfo.dat. Follow below: - Uwind_CFSR.nc: m/s - Vwind_CFSR.nc: m/s - Pair_CFSR.nc: millibar - swrad_nam_CFSR.nc: w/m2 - lwrad_down_CFSR.nc: w/m2 - Tair_nam_CFSR.nc: Celsi...
by angelolemos
Wed Sep 07, 2016 5:35 pm
Forum: ROMS Discussion
Topic: Blowing-up problem: Bulk_fluxes
Replies: 6
Views: 1981

Blowing-up problem: Bulk_fluxes

Dear roms users, I'm new user of ROMS model and I'm having some problems about the use of BULK_FLUXES. I downloaded all the necessary information from CFSR/NCEP, 6h-6h (http://nomads.ncdc.noaa.gov/thredds/dodsC/modeldata), but the wind-stress and surface net heat flux of model results are not real a...
by angelolemos
Fri Jan 22, 2016 6:10 pm
Forum: ROMS Bugs
Topic: Beware of netCDF STRINGs
Replies: 6
Views: 4217

Re: Beware of netCDF STRINGs

Hi, I am using the Roms Agrif version in an interannual experiment (October/2015). Using data from HYCOM to generate CLM file, I modified the create_clim to avoid large netcdf file. I modified the code of create_climfile.m file: from: ncid=netcdf.create(clmname,'64BIT_OFFSET'); to: ncid=netcdf.creat...
by angelolemos
Tue Jul 20, 2010 7:56 pm
Forum: ROMS Discussion
Topic: MAIN_ncfiles_clima_TS
Replies: 0
Views: 620

MAIN_ncfiles_clima_TS

Someone can help me with this problem? My compiler is gcc 4.0, Debian system and Matlab R2009a. >> MAIN_ncfiles_clima_TS ----------STAGE 3 ---------- Doing Levitus Clima ... RNT_GRIDINFO - brazilconfigured HC set from minumum depth WARNING! -10 -- time level 1 Updating ... WARNING: check always spac...
by angelolemos
Tue Jul 20, 2010 7:11 pm
Forum: ROMS Tools and Techniques
Topic: RNT libcxa.so.5
Replies: 5
Views: 2598

Re: RNT libcxa.so.5

Hi Dears, My problem is almost the same. >> MAIN_ncfiles_clima_TS ----------STAGE 3 ---------- Doing Levitus Clima ... RNT_GRIDINFO - brazilconfigured HC set from minumum depth WARNING! -10 -- time level 1 Updating ... WARNING: check always spacing of depth array - manu NaN values found in Tn ??? In...
by angelolemos
Tue Jul 20, 2010 3:48 pm
Forum: ROMS Usage
Topic: MAIN_ncfiles_clima_TS
Replies: 0
Views: 804

MAIN_ncfiles_clima_TS

Hi Dears, Someone can help me with this problem? >> MAIN_ncfiles_clima_TS ----------STAGE 3 ---------- Doing Levitus Clima ... RNT_GRIDINFO - brazilconfigured HC set from minumum depth WARNING! -10 -- time level 1 Updating ... WARNING: check always spacing of depth array - manu NaN values found in T...
by angelolemos
Tue Jul 13, 2010 8:19 pm
Forum: ROMS Tools and Techniques
Topic: Problem with the MATLAB R2009a version (7.8.0) and Netcdf
Replies: 3
Views: 3284

Re: Problem with the MATLAB R2009a version (7.8.0) and Netcdf

Hi, I'm with a serious problem with Matlab 7.8.0 (R2009a) and the NetCDF. So, I'm begin in ROMS Model, and I don't know how set up my Set Path correctly at Matlab. I downloaded the Roms Netcdf Toolbox, which contain the following files (I think they are the main): ./main_data ./matlab ./matlib ./dat...
by angelolemos
Tue Jul 06, 2010 1:47 pm
Forum: ROMS Usage
Topic: rnc_SetClimaConst(grd,clmfile);
Replies: 0
Views: 1008

rnc_SetClimaConst(grd,clmfile);

Hi People, I'm following strictly the steps of the MATLAB TOOLBOX TO ROMS. I created my grid without problem: grid: coast-grid.nc coast: east_brazilian_coast.mat indices: ijcoast.mat lon: 4648x1 lat: 4648x1 Icst: 4648x1 Jcst: 4648x1 Apparently the netcdf package worked very well. To do this grid, I ...
by angelolemos
Tue Jun 01, 2010 6:20 pm
Forum: ROMS Tools and Techniques
Topic: Problem with the MATLAB R2009a version (7.8.0) and Netcdf
Replies: 3
Views: 3284

Problem with the MATLAB R2009a version (7.8.0) and Netcdf

People, I have installed a new version of Matlab. I already download the matlab-toolbox-roms. So, the problem appear when nothing is working anymore. I can't find a mexnc and snctools compatible with this new version of matlab to create a grid file with seagrid. I'm severely thinking to change to EA...
by angelolemos
Tue Jun 01, 2010 5:53 pm
Forum: ROMS Tools and Techniques
Topic: Seagrid error
Replies: 11
Views: 7416

Re: Seagrid error

Hi everybody.
I have the same problem of DREWA, in the top of the session.
drewa, do you solved the problem?!
Someone can help us?!

Thanks!
by angelolemos
Tue May 04, 2010 12:00 pm
Forum: ROMS Problems
Topic: Problem with seagrid2roms.m
Replies: 2
Views: 1315

Problem with seagrid2roms.m

Hi everybody, When I execute the file seagrid2roms.m, an error appeared in the line 200. disp(' ## Defining Dimensions...') nc('xi_psi') = L; The error is: >> nc('xi_rho') = LP; ??? Error using ==> finite FINITE is obsolete. USE ISFINITE instead. Error in ==> ncdim.ncdim at 70 if ~finite(theDimsize)...
by angelolemos
Thu Apr 29, 2010 6:02 pm
Forum: ROMS Installation
Topic: Error with the command mex
Replies: 0
Views: 767

Error with the command mex

I'm creating a grid file with matlab and seagrid. I'm following what is write in the file MAIN_grid.m. The error is: >> mex rnt_hindicesTRI_mex.f g95: Unrecognized option '-c' mex: compile of 'rnt_hindicesTRI_mex.f' failed. ??? Error using ==> mex at 206 Unable to complete successfully. Someone can ...
by angelolemos
Mon Apr 26, 2010 1:10 pm
Forum: ROMS Information
Topic: Extracting Bathymetry and Coastline Data for SeaGrid
Replies: 16
Views: 18294

Re: Extracting Bathymetry and Coastline Data for SeaGrid

Kate, I had installed correctly the libgfortran. So, I think that the file mex can't be changed, because the following error appeared: >> mex rnt_hindicesTRI_mex.f g95: Unrecognized option '-c' mex: compile of 'rnt_hindicesTRI_mex.f' failed. ??? Error using ==> mex at 206 Unable to complete successf...
by angelolemos
Mon Apr 19, 2010 4:37 pm
Forum: ROMS Information
Topic: Extracting Bathymetry and Coastline Data for SeaGrid
Replies: 16
Views: 18294

Re: Extracting Bathymetry and Coastline Data for SeaGrid

Thanks Kate, but other problem appeared: >> mex rnt_hindicesTRI_mex.f Warning: You are using gcc version "4.4.2-9)". The earliest gcc version supported with mex is "4.0.0". The latest version tested for use with mex is "4.2.0". To download a different version of gcc, visit http://gcc.gnu.org g95: Un...
by angelolemos
Thu Apr 15, 2010 12:12 pm
Forum: ROMS Information
Topic: Extracting Bathymetry and Coastline Data for SeaGrid
Replies: 16
Views: 18294

Re: Extracting Bathymetry and Coastline Data for SeaGrid

It worked! Thanks a lot. Other problem persist. h=rnt_griddata(lon,lat,topo,grd.lonr,grd.latr,'cubic'); ??? Invalid MEX-file '/home/angelolemos/src/ROMS/roms-grid/rnt_hindicesTRI_mex.mexglx': libifport.so.5: cannot open shared object file: No such file or directory. Error in ==> rnt_hindicesTRI at 4...
by angelolemos
Wed Apr 14, 2010 7:39 pm
Forum: ROMS Information
Topic: Extracting Bathymetry and Coastline Data for SeaGrid
Replies: 16
Views: 18294

Re: Extracting Bathymetry and Coastline Data for SeaGrid

Hi dears, I followed what is write in the file MAIN_grid.m. I created my grid file, using all the packages mentioned, including seagrid. My problem appear when a typed: unix(['vi ',configfile]); grd=rnt_gridload(nameit); My matlab just give the mensage: [54;1HError detected while processing /home/an...
by angelolemos
Tue Feb 09, 2010 4:45 pm
Forum: ROMS Usage
Topic: Problem with varinfo.dat
Replies: 1
Views: 1068

Problem with varinfo.dat

Hi people, I ran correctly the test case UPWELLING, but now I want to do the same thing with the river_plume1 test case. I followed the same steps, I copied the files varinfo.dat and ocean_riverplume1.in from src/ROMS/External to my folder /projects/river_test1. I copied the file riverplume.h from s...
by angelolemos
Wed Feb 03, 2010 5:37 pm
Forum: ROMS Usage
Topic: ana_grid.h from upwelling test case
Replies: 1
Views: 992

ana_grid.h from upwelling test case

People, Anyone can tell me what means the values 84.5, 66.526 (the complete equation too)and strings not declared JstrR, JendR, IstrR and IendR below from ana_grid.h? #elif defined UPWELLING DO j=JstrR,JendR IF (j.le.Mm(ng)/2) THEN val1=REAL(j,r8) ELSE val1=REAL(Mm(ng)+1-j,r8) END IF val2=MIN(depth,...
by angelolemos
Mon Oct 26, 2009 7:24 pm
Forum: ROMS Discussion
Topic: gmake errors: gmake: *** virtual memory exhausted. Stop. ..
Replies: 11
Views: 3992

Re: gmake errors: gmake: *** virtual memory exhausted. Stop. ..

People, I checked it. My version is: GNU Make 3.80 Copyright (C) 2002 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Nevertheless the problem persists: /afs/posseidon...
by angelolemos
Mon Oct 26, 2009 1:18 pm
Forum: ROMS Discussion
Topic: gmake errors: gmake: *** virtual memory exhausted. Stop. ..
Replies: 11
Views: 3992

Re: gmake errors: gmake: *** virtual memory exhausted. Stop. ..

I found a similar error: /afs/posseidon.dern.ufes.br/usr/angelolemos/src# gmake makefile:235: INCLUDING FILE /afs/posseidon.dern.ufes.br/usr/angelolemos/src/Compilers/make_macros.mk WHICH CONTAINS APPLICATION-DEPENDENT MAKE DEFINITIONS gmake: *** virtual memory exhausted. Stop. How can I solve that?...
by angelolemos
Mon Oct 26, 2009 12:31 pm
Forum: ROMS Usage
Topic: Run the model on a parallel computer
Replies: 6
Views: 1444

Re: Run the model on a parallel computer

Kate, I found other error that you already saw. /afs/posseidon.dern.ufes.br/usr/angelolemos/src# gmake makefile:235: INCLUDING FILE /afs/posseidon.dern.ufes.br/usr/angelolemos/src/Compilers/make_macros.mk WHICH CONTAINS APPLICATION-DEPENDENT MAKE DEFINITIONS gmake: *** virtual memory exhausted. Stop...
by angelolemos
Fri Oct 23, 2009 5:19 pm
Forum: ROMS Usage
Topic: Run the model on a parallel computer
Replies: 6
Views: 1444

Re: Run the model on a parallel computer

Thank you kate. I got the makefile in the package from ROMS, when I did the svn command. https://www.myroms.org/wiki/index.php/ROMS_UNSW2008 The file is in the directory src with the others: Atmosphere Compilers Data Lib makefile Master ROMS User Waves Have I to install the new version "GNU Make 3.8...
by angelolemos
Fri Oct 23, 2009 1:44 pm
Forum: ROMS Usage
Topic: Run the model on a parallel computer
Replies: 6
Views: 1444

Run the model on a parallel computer

People, I have an important and single question. I have a cluster with 6 machines Sun Solares, each one with 4 processors. All together I have 24 processors. master node01 node02 node03 node04 node05 I'm logged in the master machine. I used: export USE_MPI=on in my build.bash file The problem is tha...
by angelolemos
Tue Oct 13, 2009 8:01 pm
Forum: ROMS Usage
Topic: Input files of Downwelling/Upwelling test case
Replies: 5
Views: 2088

Re: Input files of Downwelling/Upwelling test case

Thanks Jungwoo Lee, I asked this question because I want to put my own input files of grid, forcings, so on, following this test. So, the test doesn't call any input file? Then, how the model make all the calculus? With which input data? The first step to put my case is upload a "myfile.h", so, How ...
by angelolemos
Tue Oct 13, 2009 6:47 pm
Forum: ROMS Usage
Topic: Input files of Downwelling/Upwelling test case
Replies: 5
Views: 2088

Input files of Downwelling/Upwelling test case

Hi people, My question is so simple. I run the test case Downwelling/Upwelling, but I can't find the files ocean_grd.nc and ocean_ini.nc. Where is the input files which the ROMS uses to run this test case? I would like find it because I want to replace with my input files. Thanks anyone who can help...
by angelolemos
Tue Apr 14, 2009 1:05 pm
Forum: User Applications
Topic: Help with roms application
Replies: 1
Views: 2114

Help with roms application

Hi everyone, I need help to run any study case in the roms model. My system is Linux and I use the ifort compiler. My path is /home/angelolemos/roms/trunk I need a person who I can talk daily by e-mail. My main problem is how to use the build.sh, I can't understand these language because I even used...