Search found 183 matches

by robertson
Tue Oct 26, 2021 3:41 pm
Forum: Job Opportunities
Topic: Assistant Teaching Professor SOSE - U. of Southern Mississippi
Replies: 0
Views: 269

Assistant Teaching Professor SOSE - U. of Southern Mississippi

The Division of Marine Science in the School of Ocean Science and Engineering (SOSE) at The University of Southern Mississippi invites qualified applicants for a non-tenure track faculty position as Assistant Teaching Professor (or Instructor, depending upon terminal degree) and Coordinator of the U...
by robertson
Fri Sep 17, 2021 2:45 pm
Forum: Job Opportunities
Topic: Post-Doctoral Position In Global Ocean Modelling - Sorbonne Université
Replies: 0
Views: 387

Post-Doctoral Position In Global Ocean Modelling - Sorbonne Université

Two-year postdoctoral position for an experienced ocean modeler at Sorbonne Université at the Laboratoire d’Oceanographie de Villefranche/Mer (LOV). For more information, see the job posting on the EGU website: https://www.egu.eu/jobs/3764/post-doctoral-position-in-global-ocean-modelling/ Julia Uitz...
by robertson
Tue Sep 14, 2021 6:14 pm
Forum: ROMS Installation
Topic: ROMS compilation in multi processed environment
Replies: 2
Views: 297

Re: ROMS compilation in multi processed environment

Your machine has 44 real cores with hyper-threading resulting in 88 CPUs being listed. Open MPI (and all other MPI implementations I have used) looks at your real cores only and that is the limit for mpirun. You can override this by issuing the --oversubscribe flag in your mpirun command but even Op...
by robertson
Fri Jun 11, 2021 3:09 pm
Forum: ROMS Bugs
Topic: ROMS4 built with PIO, freeze on creating history file
Replies: 17
Views: 1499

Re: ROMS4 built with PIO, freeze on creating history file

FORT was undefined, but FC was defined with intel... So, ROMS setup was defaulting to setting things up for PGI then actually doing the compilation with IFORT. Somehow wasn't an issue when setting up 3.9 (beyond strings of warnings). Fixed by simply adding FORT=intel. ROMS uses a combination of ope...
by robertson
Wed Jun 09, 2021 1:00 am
Forum: ROMS Bugs
Topic: ROMS4 built with PIO, freeze on creating history file
Replies: 17
Views: 1499

Re: ROMS4 built with PIO, freeze on creating history file

I see some rather amazing technical issues with that build. First it appears that you somehow have a mix of pgf90 (PGI), ifort (Intel), and gfortran (GNU). The compiling flags (-fastsse -Mipa=fast -Kieee) in your build are for the PGI compilers, suggesting that you have either not set FORT or set it...
by robertson
Tue Jun 08, 2021 11:38 pm
Forum: ROMS Bugs
Topic: ROMS4 built with PIO, freeze on creating history file
Replies: 17
Views: 1499

Re: ROMS4 built with PIO, freeze on creating history file

We need to see the link line that produces that error so we can see if you have the all the includes and libraries that you need listed.
by robertson
Tue Jun 08, 2021 2:46 pm
Forum: ROMS Bugs
Topic: ROMS4 built with PIO, freeze on creating history file
Replies: 17
Views: 1499

Re: ROMS4 built with PIO, freeze on creating history file

USE_PIO (and USE_SCORPIO ) are used only by the build script to add PIO (or SCORPIO) libraries and includes to the ROMS compilation configuration. They do not automatically define the PIO_LIB CPP option. The same is true of USE_NETCDF4 which does not instruct ROMS to output NetCDF4/HDF5 files. You ...
by robertson
Fri May 21, 2021 2:02 pm
Forum: ROMS Tools and Techniques
Topic: Missing the ncgm2www script in the ROMS plotting package
Replies: 6
Views: 987

Re: Missing the ncgm2www script in the ROMS plotting package

It may be because you have not listed a coastline file after the grid file. I believe the coastline file is required even if your plotted area does not have any land.
by robertson
Mon May 03, 2021 4:41 pm
Forum: ROMS Installation
Topic: first time running upwelling test case
Replies: 7
Views: 1942

Re: first time running upwelling test case

Is it possible that you are trying to run an OpenMP (shared memory) ROMS executable using an 'mpirun' command? You have -fopenmp in your list of flags but the multiple occurrences of: -------------------------------------------------------------------------------- Model Input Parameters: ROMS/TOMS v...
by robertson
Mon May 03, 2021 2:05 pm
Forum: ROMS Installation
Topic: first time running upwelling test case
Replies: 7
Views: 1942

Re: first time running upwelling test case

In order have any idea what is going on we would need to see the error after you fixed your tiling error.
by robertson
Wed Mar 17, 2021 2:55 pm
Forum: ROMS Problems
Topic: Fatal erorr after update to ubuntu 20.04
Replies: 2
Views: 437

Re: Fatal erorr after update to ubuntu 20.04

During the upgrade to ubuntu 20.04 the GNU Compilier Suite was likely upgraded to version 9.3. Assuming you built NetCDF 4.7.4 yourself, your options are: build NetCDF again with the new compiler, downgrade the compiler, or install the libnetcdff-dev and netcdf-bin packages (this will also install a...
by robertson
Mon Mar 15, 2021 2:15 pm
Forum: ROMS Installation
Topic: upwelling - linux-ifort.mk compilation error
Replies: 5
Views: 805

Re: upwelling - linux-ifort.mk compilation error

If indeed this path is correct /home/bangdt/netcdf-3.6.1/lib then that is an incredibly old build of NetCDF (3.6.1 Released 02/26/2006). At any rate, either you didn't build the Fortran interface or you split the library and there is both a libnetcdf and libnetcdff in that lib directory. For the lat...
by robertson
Mon Mar 08, 2021 2:48 pm
Forum: ROMS Installation
Topic: Compilation error for plotting package
Replies: 10
Views: 1773

Re: Compilation error for plotting package

My guess is that /Users/sean/bin doesn't exist. Error number 2 is "No such file or directory".
by robertson
Wed Mar 03, 2021 4:51 pm
Forum: ROMS Installation
Topic: Compilation error for plotting package
Replies: 10
Views: 1773

Re: Compilation error for plotting package

You appear to be using a combination of Homebrew and anaconda so perhaps that is contributing to your issues. That said, in older versions of ncl/ncarg there was a separate library ( libncarg_gks_cairo.a) that had several added dependencies ( -lcairo -lfontconfig -lpixman-1 -lfreetype etc.). Some ti...
by robertson
Tue Mar 02, 2021 5:14 am
Forum: ROMS Tools and Techniques
Topic: Error to plot by the ROMS plotting package
Replies: 17
Views: 2418

Re: Error to plot by the ROMS plotting package

Using an NCL/NCARG built with the system's gnu (4.8.5) is very unlikely to work with a NetCDF/HDF5 and ROMS plotting package compiled with Intel compilers. You have 2 options, find or compile NCL/NCARG with the Intel compilers or find or compile NetCDF/HDF5 with the GNU 4.8.5 compilers.
by robertson
Mon Mar 01, 2021 3:44 pm
Forum: ROMS Installation
Topic: Compilation error for plotting package
Replies: 10
Views: 1773

Re: Compilation error for plotting package

Try installing cairo and freetype (probably called freetype2) libraries. If they are already installed, make sure they are the 64-bit versions and are in the library search path.
by robertson
Mon Mar 01, 2021 3:14 pm
Forum: ROMS Tools and Techniques
Topic: Error to plot by the ROMS plotting package
Replies: 17
Views: 2418

Re: Error to plot by the ROMS plotting package

I also just noticed that your csecG executable seems to be link to libgfortran as well. Perhaps your version of NCAR Graphics was built with gfortran instead of the Intel compilers. What is your NCARG_ROOT environment variable set to?
by robertson
Fri Feb 26, 2021 2:56 pm
Forum: ROMS Tools and Techniques
Topic: Error to plot by the ROMS plotting package
Replies: 17
Views: 2418

Re: Error to plot by the ROMS plotting package

It looks like the netcdf and HDF5 you are linking with were compiled with a much older (2016) Intel compiler than you are using to compile the plotting package (2020). Do you have access to the Intel 2016 compiler? If so, try compiling the plotting package with that version instead.
by robertson
Mon Feb 15, 2021 5:17 am
Forum: ROMS Tools and Techniques
Topic: Error to plot by the ROMS plotting package
Replies: 17
Views: 2418

Re: Error to plot by the ROMS plotting package

Is it possible that when the plotting package runs it's actually using a different NetCDF than you compiled with? If you are running Linux type: ldd /path/to/csecG with /path/to replaced by the correct path to csecG. Make sure that the libnetcdf listed by the ldd command is the one you compiled agai...
by robertson
Wed Feb 10, 2021 2:22 pm
Forum: ROMS Tools and Techniques
Topic: Error to plot by the ROMS plotting package
Replies: 17
Views: 2418

Re: Error to plot by the ROMS plotting package

You could try building the plotting package with PLT_DEBUG turned on. That might give you a better idea where the error is occurring. Building with debug will not replace your existing csec, etc. but will instead create a csecG, etc. in the MY_PROJECT_DIR, which is usually the directory you execute ...
by robertson
Mon Feb 08, 2021 2:43 pm
Forum: ROMS Installation
Topic: Compilation error for plotting package
Replies: 10
Views: 1773

Re: Compilation error for plotting package

The plotting package also has build scripts in src/Bin. However, the build scripts for the plotting packages have not been updated to use "my_build_paths" so the paths are set further down in the script. For the build_plt.bash script I believe you will need to edit lines 279 and 280. From ...
by robertson
Thu Feb 04, 2021 7:26 pm
Forum: ROMS Installation
Topic: Compilation error for netcdf-c-4.7.4
Replies: 3
Views: 647

Re: Compilation error for netcdf-c-4.7.4

When you installed NetCDF, which packages did you choose? I believe if you choose "libnetcdf-fortran-devel" that should, as long as you allow the dependencies to install, get you everything you need as far as NetCDF is concerned. However, I have not tried this in many years so I could be m...
by robertson
Tue Feb 02, 2021 4:02 pm
Forum: ROMS Tools and Techniques
Topic: Error to plot by the ROMS plotting package
Replies: 17
Views: 2418

Re: Error to plot by the ROMS plotting package

You need to completely remove the line:

Code: Select all

!Wind-Driven Upwelling/Downwelling over a Periodic Channel
The plotting package is expecting "nfields" to be line 6. There can't be any missing or commented lines until line 45 and the order matters.
by robertson
Tue Feb 02, 2021 3:53 pm
Forum: ROMS Installation
Topic: Compilation error for netcdf-c-4.7.4
Replies: 3
Views: 647

Re: Compilation error for netcdf-c-4.7.4

As noted near the end of the topic you referenced, we recommend against compiling your own NetCDF when working in Cygwin. The Cygwin installer includes binary packages NetCDF and also includes OpenMPI if you would like to run the model in parallel.
by robertson
Mon Feb 01, 2021 4:09 pm
Forum: ROMS Tools and Techniques
Topic: Error to plot by the ROMS plotting package
Replies: 17
Views: 2418

Re: Error to plot by the ROMS plotting package

I'm guessing you have a typo near the bottom:

cean_avg1_00001.nc
by robertson
Sat Jan 30, 2021 8:31 am
Forum: ROMS Tools and Techniques
Topic: problem about the plotting package installation
Replies: 27
Views: 13366

Re: problem about the plotting package installation

In the makefile inside the src directory replace: NEED_VERSION := 3.80 3.81 3.82 $(if $(filter $(MAKE_VERSION),$(NEED_VERSION)),, \ $(error This makefile requires one of GNU make version $(NEED_VERSION).)) with: ifneq (3.80,$(firstword $(sort $(MAKE_VERSION) 3.80))) $(error This makefile requires GN...
by robertson
Fri Jan 29, 2021 3:05 pm
Forum: Job Opportunities
Topic: Two-years postdoc position in regional ocean modelling
Replies: 0
Views: 728

Two-years postdoc position in regional ocean modelling

Posted at the request of Jerry Tjiputra: Two-years postdoc position in regional ocean modelling (deadline 14.02.2021). The Norwegian Research Centre (NORCE, Bjerknes Centre) in Bergen, Norway is seeking a regional ocean modeller. The 2-yr postdoc position aims to develop a high-resolution regional c...
by robertson
Thu Jan 28, 2021 3:26 pm
Forum: ROMS Installation
Topic: Compilation error for build_roms.sh
Replies: 17
Views: 2196

Re: Compilation error for build_roms.sh

That is correct. I thought I had replaced all the occurrences of 'ocean*' with 'roms*' in the wiki but I clearly missed some. I corrected several more pages this morning but, out of curiosity, on which page did you find the reference to 'oceanS'?
by robertson
Thu Jan 28, 2021 8:21 am
Forum: ROMS Installation
Topic: Compilation error for build_roms.sh
Replies: 17
Views: 2196

Re: Compilation error for build_roms.sh

I'm not sure where homebrew is getting their patches but they are missing some important things and are actually further from a usable product than the netcdf-fortran 4.5.3 release is. I believe home brew puts symlinks to all libraries in /usr/local/lib so, if you have the proper permissions, I woul...
by robertson
Wed Jan 27, 2021 4:06 pm
Forum: ROMS Discussion
Topic: I/O error
Replies: 4
Views: 811

Re: I/O error

Maybe something was corrupted during transfer? What command(s) did you use to transfer to your own server? What operating system is "South Sea" and what operating system is your "own server"?
by robertson
Wed Jan 27, 2021 3:28 pm
Forum: ROMS Installation
Topic: Compilation error for build_roms.sh
Replies: 17
Views: 2196

Re: Compilation error for build_roms.sh

Your error is still in the linking. Those object files with no symbols are normal and most of them relate to the 4D-Var system which isn't used for the upwelling test case. From the paths you have shared, I'm assuming that you are using a Mac with Homebrew. What appears to be the issue is the 'nf-co...
by robertson
Wed Jan 27, 2021 6:31 am
Forum: ROMS Installation
Topic: Compilation error for build_roms.sh
Replies: 17
Views: 2196

Re: Compilation error for build_roms.sh

At the start of your output from the build script, which 'my_build_paths.sh' does it say it's loading and does it match the path to the one you have updated. From your latest post of the ROMS link line it looks like there aren't any NetCDF libraries linking at all now. What is returned when you type...
by robertson
Tue Jan 26, 2021 7:55 pm
Forum: ROMS Discussion
Topic: NETCDF PROBLEM WHEN RUNNING MODEL
Replies: 6
Views: 953

Re: NETCDF PROBLEM WHEN RUNNING MODEL

Since you executed the build script as root, the Build_roms directory is owned by root so user javadbabagoli does not have permission to remove it. Manually remove (rm -rf Build_roms) the Build_roms directory as root. Then run the build script (as javadbabagoli) again. If you still get permission er...
by robertson
Tue Jan 26, 2021 7:27 pm
Forum: ROMS Discussion
Topic: NETCDF PROBLEM WHEN RUNNING MODEL
Replies: 6
Views: 953

Re: NETCDF PROBLEM WHEN RUNNING MODEL

That svn error should not stop compilation and the command that is failing is only used for informational purposes. Compiling (and running) ROMS as root is never a good idea. It's also quite likely that somewhere along the line you made a directory that is owned by root and that is probably what isn...
by robertson
Tue Jan 26, 2021 5:40 pm
Forum: ROMS Discussion
Topic: NETCDF PROBLEM WHEN RUNNING MODEL
Replies: 6
Views: 953

Re: NETCDF PROBLEM WHEN RUNNING MODEL

It doesn't really agree with the error you're getting but are you absolutely sure you have write permissions to the directory you're writing the history file to?
by robertson
Tue Jan 26, 2021 5:32 pm
Forum: ROMS Installation
Topic: Compilation error for build_roms.sh
Replies: 17
Views: 2196

Re: Compilation error for build_roms.sh

In your build script enable "USE_NETCDF4". This will allow the build system to get the proper library locations and names to link your executable.
by robertson
Tue Jan 26, 2021 5:20 pm
Forum: ROMS Discussion
Topic: I/O error
Replies: 4
Views: 811

Re: I/O error

When I open your .in and .h files my editor says they are "dos" format. However, from your log output it does not look like you are running on a windows system. Did you, by chance, edit these files in Windows? If your system has 'dos2unix' run that on any files you edited in Windows. If no...
by robertson
Mon Jan 25, 2021 2:39 pm
Forum: ROMS Installation
Topic: Compilation error for build_roms.sh
Replies: 17
Views: 2196

Re: Compilation error for build_roms.sh

Typically /bin/sh errors are due to the build script not being able to find an executable. Most often it is the compiler but can also be nf-config or others. My first guess would be the build script is unable to find your compiler. Check that whatever compiler you're asking it to find (and mpif90 if...
by robertson
Fri Jan 08, 2021 5:12 pm
Forum: ROMS Problems
Topic: Error while running Fjord test case for the first time
Replies: 1
Views: 385

Re: Error while running Fjord test case for the first time

you problem is: 12 levsfrc Deepest level to apply surface stress as a bodyforce. READ_PHYPAR - Invalid input parameter, levsfrc = 12 Out of range surface bodyforce level. Found Error: 05 Line: 191 Source: ROMS/Utility/inp_par.F Found Error: 05 Line: 115 Source: ROMS/Drivers/nl_ocean.h, ROMS_initiali...
by robertson
Fri Jan 08, 2021 3:46 pm
Forum: ROMS Problems
Topic: Error while compiling ROMS for the first time.
Replies: 2
Views: 696

Re: Error while compiling ROMS for the first time.

I would suggest trying Windows Subsystem for Linux (WSL) if that is an option for you. More information can be found here . We don't have a tutorial for that but, once you have your WSL setup, the procedure should be the same as regular Linux. The Cygwin tutorial in the wiki is very old and many thi...
by robertson
Wed Jan 06, 2021 4:03 pm
Forum: ROMS Tools and Techniques
Topic: plot package problem
Replies: 21
Views: 6996

Re: plot package problem

Perhaps Conda didn't put libX11 in a location the linker knows about. Find out where libX11 actually resides and make sure that path is in the LD_LIBRARY_PATH and LIBRARY_PATH environment variables.
by robertson
Mon Dec 28, 2020 6:10 pm
Forum: ROMS Problems
Topic: Error compiling ROMS
Replies: 3
Views: 710

Re: Error compiling ROMS

You probably need to do: export MY_ROOT_PATH=/cygdrive/d/Agathe/Ecole/Modele3D/software/roms and: export MY_ROMS_SRC=${MY_ROOT_DIR}/Projects/trunk You should always avoid spaces in assignments when using bash. There should be no space before or after an equals sign during assignments
by robertson
Thu Dec 17, 2020 5:00 pm
Forum: ROMS Installation
Topic: git clone
Replies: 11
Views: 1699

Re: git clone

enter home directory 'cd ~' and enter commands in single command line vi .netrc machine www.myroms.org login rdfleay password -my password- protocol https terminal does some funky run.. I have adjusted the documentation to clarify but vi is a common text editor you could use to enter the next few l...
by robertson
Thu Dec 17, 2020 3:37 pm
Forum: ROMS Installation
Topic: git clone
Replies: 11
Views: 1699

Re: git clone

I have rearranged the documentation on the WikiROMS Git page so instructions for setting up a credential manager comes before instructions for downloading the code.
by robertson
Wed Dec 16, 2020 10:35 pm
Forum: ROMS Installation
Topic: git clone
Replies: 11
Views: 1699

Re: git clone

I have not confirmed this, but I believe that the "git checkout" and/or "git rev-parse" commands actually result in multiple git commands being executed and each git command is asking for your password. Set up a credential manager (explained further down on the ROMS Git wiki page...
by robertson
Tue Aug 25, 2020 4:03 pm
Forum: ROMS Adjoint
Topic: RBL4DVAR error after upgrade to SVN Revision 1036
Replies: 2
Views: 748

Re: RBL4DVAR error after upgrade to SVN Revision 1036

Try updating your varinfo.dat file.
by robertson
Fri Aug 07, 2020 3:02 pm
Forum: ROMS Problems
Topic: COMPILING PROBLEM ld: cannot find -ltorque
Replies: 1
Views: 599

Re: COMPILING PROBLEM ld: cannot find -ltorque

Torque is likely the resource manager/job scheduler on the cluster you are using. Since it is a system specific library (and it's not listed in the ROMS link line you have provided) it should be taken care of by your mpi compiler (mpif90). Most likely your environment is set up incorrectly or you ar...
by robertson
Thu Jul 30, 2020 4:55 pm
Forum: ROMS Installation
Topic: Compiling COAWST_v3.6 errror
Replies: 9
Views: 1968

Re: Compiling COAWST_v3.6 errror

It also looks like you're compiling with the Intel Fortran compiler but trying to link with a NetCDF compiled with GNU (highlighted in red ). /work/apps/intel/mvapich2/2.3.2/bin/mpif90 -fp-model precise -ip -O3 -traceback -check uninit -assume byterecl -I/work/users/weather/user/manh/COAWST/Lib/MCT/...
by robertson
Mon Jun 08, 2020 3:23 pm
Forum: ROMS Discussion
Topic: Undefined reference in libUTIL.a and libMODS.a running build_roms.sh (build.bash) for ROMS compiling (upwelling case)
Replies: 2
Views: 691

Re: Undefined reference in libUTIL.a and libMODS.a running build_roms.sh (build.bash) for ROMS compiling (upwelling case

We need to see the command that came right before all your undefined references. Also, do you have "USE_NETCDF4" set to on your build_roms.sh?
by robertson
Sat Apr 18, 2020 4:59 pm
Forum: ROMS Problems
Topic: WC13/R4DVAR Compiling Problem
Replies: 3
Views: 1496

Re: WC13/R4DVAR Compiling Problem

Where are your libarpack.a and libparpack.a ? Assuming your ARPACK source code is in the /root/ARPACK directory then both libarpack.a and libparpack.a should be in /root/ARPACK. The way you have things configured, you are telling the linker that libparpack.a is in the /root/ARPACK/PARPACK directory....
by robertson
Thu Mar 26, 2020 5:41 am
Forum: ROMS Installation
Topic: ERROR COMPILING FOR THE FIRST TIME
Replies: 15
Views: 2693

Re: ERROR COMPILING FOR THE FIRST TIME

I also just noticed that it looks like you have edited the build script and my_build_paths files with a windows editor that uses incorrect line returns (those \r warnings). That could have been causing the error you had originally. When I look at your build_roms.bash with an editor like vim I see se...
by robertson
Wed Mar 25, 2020 5:44 pm
Forum: ROMS Installation
Topic: ERROR COMPILING FOR THE FIRST TIME
Replies: 15
Views: 2693

Re: ERROR COMPILING FOR THE FIRST TIME

Did you build NetCDF yourself or use the NetCDF (and NetCDF fortran) provided by Cygwin? From you error messages it looks like you built netcdf fortran but not the required Netcdf-C. I would suggest installing the cygwin provided netcdf and netcdf-fortran.
by robertson
Wed Mar 25, 2020 4:38 pm
Forum: ROMS Installation
Topic: ERROR COMPILING FOR THE FIRST TIME
Replies: 15
Views: 2693

Re: ERROR COMPILING FOR THE FIRST TIME

We need the linking command that precedes the errors you posted. It should be a multi-line command listing all the built libraries that will makeup the executable...something similar to this: /opt/sw/packages/intel/17.0.4/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -fp-model precise -heap...
by robertson
Thu Mar 05, 2020 3:25 pm
Forum: ROMS Source
Topic: Typo in roms.in following overhaul of advection schemes
Replies: 4
Views: 1517

Re: Typo in roms.in following overhaul of advection schemes

The typos in the roms.in glossaries were corrected in SVN Revision 1009 and Git cbc84128d7d33150dc40ade4821b82dce6ce5662. Details can be found :arrow: here
by robertson
Thu Mar 05, 2020 3:14 pm
Forum: ROMS Adjoint
Topic: Adjoint compilation error with define VISC4 and DIFF4
Replies: 1
Views: 854

Re: Adjoint compilation error with define VISC4 and DIFF4

Fixed in SVN Revision 1009 and Git cbc84128d7d33150dc40ade4821b82dce6ce5662. Details can be found :arrow: here
by robertson
Tue Mar 03, 2020 3:20 pm
Forum: ROMS Discussion
Topic: compiling ROMS with DIAGNOSTICS_TS
Replies: 3
Views: 974

Re: compiling ROMS with DIAGNOSTICS_TS

idDtrc is "typed" and allocated in mod_ncparam. Check the mod_ncparam.f90 file in your /projappl/project_2000339/source/waom/Build directory. There should be a block like this: ! ! Tracer/Momentum Diagnostic variable IDs. ! integer, allocatable :: idDtrc(:,:) ! tracers terms integer, alloc...
by robertson
Tue Jan 28, 2020 2:58 pm
Forum: ROMS Bugs
Topic: Problem in compile.
Replies: 1
Views: 653

Re: Problem in compile.

In your Build_roms directory, what do lines 190-200 of your close_io.f90 file look like? Be sure to paste the lines inside a [code][/code] block so we can count white spaces. Also, what revision number of ROMS are you using and what compiler?
by robertson
Wed Dec 18, 2019 4:16 pm
Forum: ROMS Bugs
Topic: Error in ROMS execution
Replies: 12
Views: 2616

Re: Error in ROMS execution

Are you sure that the grid file is at /home/cyue/cyue/bohai/data? It looks like your username (cyue) is doubled in there.
by robertson
Fri Dec 06, 2019 9:27 pm
Forum: ROMS Discussion
Topic: Parallel IO not scaling over Serial IO for ROMS
Replies: 14
Views: 2779

Re: Parallel IO not scaling over Serial IO for ROMS

Please attach your gbplume.h file where your chosen CPP Definitions are set.
by robertson
Wed Oct 30, 2019 4:18 pm
Forum: ROMS Discussion
Topic: Problem with setting up inlet_test
Replies: 28
Views: 4122

Re: Problem with setting up inlet_test

The problem is the version of cpp that comes with Xcode. It's likely that Homebrew (I know Macports does) has a working cpp you can use instead. I would suggest you: Make a ~/Compilers/ROMS directory (mkdir -p ~/Compilers/ROMS) Place a copy of the Darwin-gfortran.mk file from the Compilers directory...
by robertson
Tue Oct 29, 2019 3:43 am
Forum: Job Opportunities
Topic: Biogeochemical Modeller - Antarctic Science Platform - NIWA
Replies: 0
Views: 933

Biogeochemical Modeller - Antarctic Science Platform - NIWA

The New Zealand Antarctic Science Platform is now seeking applications for an exciting 3-year Research Fellowship in biogeochemical modelling. The purpose of the Antarctic Science Platform is to conduct excellent science to understand Antarctica's impact on the global earth system. This new position...
by robertson
Thu Jun 06, 2019 2:17 pm
Forum: ROMS Information
Topic: error in compiling scrip_coawst
Replies: 6
Views: 2240

Re: error in compiling scrip_coawst

The "Permission denied" error would suggest that your user does not have read and/or write permissions to the file or directory.

The command "ls -la" will give you the permissions of all the files and the current directory, which will be listed as a single period (.)
by robertson
Fri May 10, 2019 1:19 pm
Forum: ROMS Installation
Topic: benchmark case compile problem
Replies: 3
Views: 1312

Re: benchmark case compile problem

Hello, Check the timestamp on your oceanM or oceanG perhaps your build failed and the executable is an older one from an upwelling test case. Though I don't believe this is contributing to your issue, you might consider setting MY_PROJECT_DIR to ${PWD} so your executable is always written to the dir...
by robertson
Tue May 07, 2019 1:19 pm
Forum: ROMS Installation
Topic: Plotting package installation problem
Replies: 1
Views: 1187

Re: Plotting package installation problem

Once you switch to Ubuntu, the plotting package will look for Linux-gfortran.mk not CYGWIN-gfortran.mk. Also, I would suggest a switch to using the build script (src/Bin/build_plt.{sh|bash}) so you don't have to modify the Linux-gfortran.mk file directly.
by robertson
Wed Apr 17, 2019 8:59 pm
Forum: ROMS Installation
Topic: compiling ROMS problem--ld: cannot find -lnetcdff
Replies: 3
Views: 1425

Re: compiling ROMS problem--ld: cannot find -lnetcdff

The directory you listed looks to have all the libraries you need in the same directory. Is the nf-config you're using associated with that lib directory you listed? I would guess not since the output of "nf-config --flibs" has different directories for libnetcdff and libnetcdf.
by robertson
Wed Apr 17, 2019 1:57 pm
Forum: ROMS Installation
Topic: compiling ROMS problem--ld: cannot find -lnetcdff
Replies: 3
Views: 1425

Re: compiling ROMS problem--ld: cannot find -lnetcdff

There are a couple oddities about your 'nf-config --flibs' output. First, "-O" and "-tp p7" are compiling flags, not linking flags. That would suggest that perhaps NetCDF wasn't configured/compiled quite right. Second, why is -R (I believe being treated as -rpath in this case) us...
by robertson
Tue Oct 23, 2018 1:19 pm
Forum: ROMS Installation
Topic: having truble with NETCDF
Replies: 2
Views: 1526

Re: having truble with NETCDF

If your configure line is a copy and paste of what you're actually using then most likely you need to add some spaces and change both 'l's to 'I's in the CPPFLAGS. ./configure CPPFLAGS='-I/home/maziar/Downloads/q/hdf5-1.8.9/include -I/home/maziar/Downloads/q/zlib-1.2.7/include' LDFLAGS='-L/home/mazi...
by robertson
Thu Sep 27, 2018 7:14 pm
Forum: ROMS Installation
Topic: compile ROMS error
Replies: 6
Views: 11078

Re: compile ROMS error

From the flags it appears that you have enabled gfortran but my first guess is that either gfortran is not installed or is not in your path. Most modern Linux distributions have a separate package for the GNU fortran compiler; it no longer comes as part of the gcc package. I believe Ubuntu has many ...
by robertson
Mon Sep 03, 2018 7:24 am
Forum: ROMS Installation
Topic: ./build.bash error:Can't open tmp file at ROMS/Bin/cpp_clean
Replies: 5
Views: 2209

Re: ./build.bash error:Can't open tmp file at ROMS/Bin/cpp_c

Check the permissions on your /home/survstu1/ROMS/trunk/Projects/Upwelling/Build_roms directory. Your error would indicate that you don't have the proper permissions to write to that directory. However, it is strange that /usr/bin/cpp appears to be able to create the /home/survstu1/ROMS/trunk/Projec...
by robertson
Mon Mar 05, 2018 2:13 pm
Forum: ROMS Installation
Topic: An compiling error regarding "crtbegin.o"
Replies: 6
Views: 3532

Re: An compiling error regarding "crtbegin.o"

I'm not positive with newer versions of PGI but with older versions you have to run the makelocalrc script (as root so you'll still need to ask the system manager) every time gcc is upgraded. In your case the system manager logged in as root should be able to run the following: cd /home/software/pgi...
by robertson
Thu Oct 29, 2015 2:45 pm
Forum: ROMS Installation
Topic: ROMS with gfortran 5.2?
Replies: 21
Views: 9104

Re: ROMS with gfortran 5.2?

Hi, I think we need clarification and/or more information. You mention segmentation fault but the post you refer to is a compiler linking error. If you are getting the same error as the post you refer to, it is likely that you have not set USE_NETCDF4 (and possibly the appropriate NETCDF_CONFIG and ...
by robertson
Thu Nov 20, 2014 7:40 pm
Forum: Job Opportunities
Topic: Scientific Programmer - USGS and WHOI
Replies: 0
Views: 2589

Scientific Programmer - USGS and WHOI

Scientific Programmer Needed Integrated Statistics is looking for a Scientific Programmer to work with the USGS Coastal and Marine Geology Program at the Woods Hole Coastal and Marine Science Center in Woods Hole, MA. USGS earth scientists explore and study many aspects of the underwater areas betw...
by robertson
Thu Apr 04, 2013 4:36 pm
Forum: ROMS Problems
Topic: Slow performance on SGI with Opterons
Replies: 6
Views: 4227

Re: Slow performance on SGI with Opterons

First thing I would check is that your process (oceanS) is not constantly switching cores on your machine. I don't know a good way to do this with oceanS but I would suggest compiling with Open MPI then run with one processor and enable the --bind-to-core (or equivalent memory affinity option for pr...
by robertson
Fri Jul 13, 2012 8:14 pm
Forum: ROMS Messages
Topic: myroms.org unexpected down time
Replies: 0
Views: 2185

myroms.org unexpected down time

Dear all, The first repair of the server that hosts myroms.org was only partially successful. The damaged caused by a faulty uninteruptable power supply (UPS/battery backup) was more extensive than originally thought. On Tuesday July 10th, the server's motherboard was replaced and the server booted ...
by robertson
Thu Jul 05, 2012 12:53 am
Forum: ROMS Installation
Topic: build.bash - compilation error with netcdf
Replies: 1
Views: 2836

Re: build.bash - compilation error with netcdf

The NetCDFs on the system are almost certainly compiled with gcc/gfortran. You are trying to compile ROMS with the Intel compiler. You need to either use gfortran to compile ROMS or compile NetCDF with the Intel compiler. If you don't have the Intel C compilers you can use gcc for the C compiler and...
by robertson
Thu Jun 14, 2012 2:01 pm
Forum: ROMS Installation
Topic: SVN problem
Replies: 4
Views: 3831

Re: SVN problem

The two issues should not have anything to do with each other. svn: Can't read file 'ROMS_620/Lib/ARPACK/LAPACK/.svn/log': Permission denied Appears to be a file permission error. Check the permissions on that file and make sure your user and/or group have write permissions on that file. Perhaps som...
by robertson
Fri Jun 01, 2012 2:30 am
Forum: ROMS Installation
Topic: SVN problem
Replies: 4
Views: 3831

Re: SVN problem

Are you sure that the computer you are running svn on has access to the internet? Some clusters and computer centers don't allow their high performance computers access to the internet for security and performance reasons.
by robertson
Wed Apr 04, 2012 3:43 pm
Forum: ROMS Problems
Topic: SOURCE POINT FOR RIVER RUNOFF (topic locked)
Replies: 115
Views: 42855

Re: SOURCE POINT FOR RIVER RUNOFF

This topic is far too long so I am locking it. Please create new posts for future queries related to this topic.
by robertson
Mon Sep 19, 2011 12:53 pm
Forum: Meetings/Workshops
Topic: OS 2012 Coastal Ocean Modeling, Analysis, and Prediction
Replies: 0
Views: 2070

OS 2012 Coastal Ocean Modeling, Analysis, and Prediction

Posted at the request of Villy Kourafalou. Dear colleagues, On behalf of the session 6 organizers, I would like to invite you to submit an abstract for the TOS/ASLO/AGU 2012 Ocean Sciences meeting, 20-24 February, 2012 , Salt Lake City, Utah, U.S.A.. https://www.sgmeet.com/osm2012/default.asp Sessi...
by robertson
Mon Apr 25, 2011 2:41 pm
Forum: ROMS Installation
Topic: Installing ROMS on Mac - error compiling netCDF3 with gfortr
Replies: 2
Views: 3675

Installing ROMS on Mac - error compiling netCDF3 with gfortr

Please check the config.log file to see the actual error that is occurring and report back.
by robertson
Wed Mar 23, 2011 6:09 pm
Forum: ROMS Bugs
Topic: Authorization failure
Replies: 2
Views: 1709

Re: Authorization failure

In your case that line should have been:

svn co --username LRasmuson https://www.myroms.org/svn/src/trunk my_dir

because user names are case sensitive.

Sorry for the confusion.
by robertson
Wed Mar 23, 2011 2:51 pm
Forum: ROMS Bugs
Topic: Authorization failure
Replies: 2
Views: 1709

Re: Authorization failure

If you need to specify a user name you should do it like this:

svn co --username lrasmuson https://www.myroms.org/svn/src/trunk my_dir

Putting it in the URL will not work.

Dave
by robertson
Thu Feb 24, 2011 2:44 pm
Forum: ROMS Problems
Topic: Intel’s new i7 980x CPU gives disappointing speedup
Replies: 48
Views: 30455

Re: Intel’s new i7 980x CPU gives disappointing speedup

This thread was getting off topic so I moved the discussion about optimization flag errors to a new thread: https://www.myroms.org/forum/viewtopic.php?t=2180 Please use the above topic for discussion related to ifort optimization flag issues on Intel i7 machines and reserve this topic for performanc...
by robertson
Tue Feb 08, 2011 3:32 pm
Forum: ROMS Installation
Topic: build.bash Problem
Replies: 4
Views: 2873

Re: build.bash Problem

I refer you to the following topic:

viewtopic.php?t=872

Please let us know if that solves your problem.
by robertson
Mon Feb 07, 2011 8:42 pm
Forum: ROMS Installation
Topic: build.bash Problem
Replies: 4
Views: 2873

Re: build.bash Problem

The build.bash script is telling you that the directory /home/aliayamahdi/roms/trunk does not exist. The script is trying to change in to the directory you set for MY_ROMS_SRC in your build.bash script. Double check that you have set this correctly and that it contains the ROMS source codes.
by robertson
Fri Dec 03, 2010 2:07 pm
Forum: Job Opportunities
Topic: Ph.D. Student Opportunity: MIT/WHOI Joint Program
Replies: 0
Views: 3163

Ph.D. Student Opportunity: MIT/WHOI Joint Program

Ph.D. Student Opportunity Population Connectivity / Ocean Modeling MIT/WHOI Joint Program We are looking for a highly motivated Ph.D. student to join a team of scientists in the Biology Department at WHOI to work on modeling marine population connectivity in a tropical ecosystem. Research will focu...
by robertson
Mon Oct 04, 2010 3:22 pm
Forum: ROMS Tools and Techniques
Topic: ROMS plotting package installation
Replies: 1
Views: 1979

Re: ROMS plotting package installation

On line 35 of src/Utility/slevels.F you need to remove " , tindx " from the end of that line so it reads: integer file, nc_gid This doesn't phase most compilers but gfortran is quite picky about types. This typo will probably be fixed soon, but for now you can correct it yourself. The erro...
by robertson
Thu Aug 26, 2010 5:16 pm
Forum: ROMS Tools and Techniques
Topic: ROMS Plot package: Linking problem with the ncarg libraries
Replies: 2
Views: 2173

Re: ROMS Plot package: Linking problem with the ncarg libraries

Did you compile the ncarg libraries your self? or did you get them from a binary package? It's possible that the ncarg libraries you have on your machine are not compatible with your SUN f95 compiler. You may need to compile ncarg with the same compiler(s) you are compiling the ROMS plotting package...
by robertson
Tue Aug 10, 2010 6:32 pm
Forum: ROMS Installation
Topic: compiling ROMS
Replies: 10
Views: 5726

Re: compiling ROMS

Sometimes gfortran is not called gfortran, sometimes it's something like gfortran44 for gfortran version 4.4.x. You need to find out what gfortran is actually called on your machine and use that name when making the adjustment Kate mentioned.
by robertson
Mon May 24, 2010 6:09 pm
Forum: ROMS Discussion
Topic: Warning during Comapilation
Replies: 1
Views: 1402

Re: Warning during Comapilation

This is usually due to your computer time clock not being synced with remote computer that is storing your source code. If you are in a Linux environment, look in to running ntpd on both/all machines to keep your clocks synced. This warning can be ignored if you do make clean before make or use the ...
by robertson
Mon Feb 08, 2010 3:49 pm
Forum: ROMS Bugs
Topic: Problems running re-start solutions.
Replies: 9
Views: 6690

Re: Problems running re-start solutions.

A question and a suggestion. Question(s): Do your Linux cluster compute nodes have AMD Opteron processors? If not, you should take out the ' -tp k8-64 ' flag or replace the 'k8-64' with a more appropriate value. Even if they are Opterons, you might get better performance with 'k8-64e' Check the man ...
by robertson
Wed Feb 03, 2010 2:16 pm
Forum: ROMS Problems
Topic: compilation error
Replies: 3
Views: 1898

Re: compilation error

On the files that are listed as modified, do an svn diff , i.e. svn diff makefile , to see how they differ from the original files on the myroms.org svn server. Perhaps your makefile or build script has somehow become corrupted. You might also want to make sure that all the files are in unix format....
by robertson
Tue Feb 02, 2010 5:01 pm
Forum: ROMS Problems
Topic: compilation error
Replies: 3
Views: 1898

Re: compilation error

What have you set ROMS_APPLICATION and FORT to and what do you get from the following commands: uname -s | sed 's/[\/ ]/-/g' uname -m | sed 's/[\/ ]/-/g' Also, what does svn status in your root source code directory tell you? do you have any files marked with a ' C '. If so you have some unresolved ...
by robertson
Mon Jan 04, 2010 3:33 pm
Forum: ROMS Problems
Topic: compilation problem
Replies: 5
Views: 2611

Re: compilation problem

I would suggest reading the :arrow: ROMS 3.3 release notes. There is mention of changes to ana_psource.h involving Lsrc. If you are using customized analytical functions you may need to update them to reflect this change.
by robertson
Fri Dec 04, 2009 4:55 pm
Forum: ROMS Installation
Topic: Problems compiling ROMS NetCDF problem
Replies: 2
Views: 1832

Re: Problems compiling ROMS NetCDF problem

Did you compile NetCDF yourself or install it as a package? In most cases it is easier and almot always necessary to compile NetCDF with the same compiler and options you wish to compile ROMS with. In short, unless you can find out exactly how your NetCDF was configured and compiled your first step ...
by robertson
Mon Nov 23, 2009 8:12 pm
Forum: ROMS Information
Topic: River discharge on the 2D circulation Model
Replies: 3
Views: 3953

Re: River discharge on the 2D circulation Model

I have absolutely no idea why this post was lost but I was able recover it. Thank you Kate for pointing this out.
by robertson
Wed Nov 11, 2009 8:38 pm
Forum: ROMS Installation
Topic: compiling error on mod_netcdf.f90
Replies: 4
Views: 3144

Re: compiling error on mod_netcdf.f90

What version of NetCDF did you compile with this version of the PGI compiler and what flags did you use? I am unable to build NetCDF-3.6.3 with PGI 5.1-6 and a simple google search reveals notes on building NetCDF-3.5.1 with the 5.1 compiler but no newer versions of NetCDF. The PGI 5.1 compiler had ...
by robertson
Wed Nov 11, 2009 2:14 pm
Forum: ROMS Tools and Techniques
Topic: plot package :Cross-section Plots problem
Replies: 3
Views: 2051

Re: plot package :Cross-section Plots problem

As you have realized, the plotting packages is telling you that one of the files listed in your csec_upwelling.in file is missing. Do you have a copy of default.cnt in the directory where you are executing the : csec < csec_upwelling.in command? If not change that line in your csec_upwelling.in file...
by robertson
Tue Nov 10, 2009 3:34 pm
Forum: ROMS Installation
Topic: compiling error on mod_netcdf.f90
Replies: 4
Views: 3144

Re: compiling error on mod_netcdf.f90

You might want to check if you have a newer PGI version available to you. I think you're using version 5.1-6 from 2004 ("PGF90/any Linux/x86 5.1-6: compilation aborted"). PGI is now at version 9; perhaps 5.1 doesn't handle the INTERFACE block correctly. However, it might be helpful if you ...
by robertson
Mon Oct 26, 2009 4:38 pm
Forum: ROMS Usage
Topic: Run the model on a parallel computer
Replies: 6
Views: 2418

Re: Run the model on a parallel computer

grep: illegal option -- P Usage: grep -hblcnsviw pattern file . . . ./build.bash : Unknown option [ 24 ] Available Options: -j [N] Compile in parallel using N CPUs omit argument for all avaliable CPUs -noclean Do not clean already compiled objects This grep error is due to the fact that your defaul...
by robertson
Thu Oct 15, 2009 6:34 pm
Forum: Meetings/Workshops
Topic: 42nd International Liege Colloquium
Replies: 0
Views: 2088

42nd International Liege Colloquium

42nd International Liege Colloquium on Ocean Dynamics Multiparametric observation and analysis of the Sea - First Announcement 26-30 April 2010 Web site: http://modb.oce.ulg.ac.be/colloquium/ The colloquium will provide a forum to present and discuss recent scientific advances on the use of new sen...
by robertson
Wed Sep 02, 2009 7:49 pm
Forum: ROMS Installation
Topic: ROMS on mac: mpif90 error
Replies: 3
Views: 2442

Re: ROMS on mac: mpif90 error

As noted in the build.bash file just above the the lines you have pasted:
Any string value (including off) will evaluate to TRUE in conditional if-stamentents.
You must either comment out the USE_MPI and USE_MPIF90 lines or remove the word "off" on those lines.
by robertson
Wed Aug 26, 2009 1:54 pm
Forum: ROMS Ecosystem
Topic: bio models give a build error: missing separator
Replies: 8
Views: 5326

Re: bio models give a build error: missing separator

Troy, So what then do the instructions: "set BPARNAM correctly and activate the corresponding CPP option" mean? BPARNAM is the location and name of your biology input parameters file. An example for EcoSim is can be found at ROMS/External/ecosim.in . I would suggest copying this file to yo...
by robertson
Wed Jul 29, 2009 3:33 am
Forum: ROMS Discussion
Topic: version 340 stop before reading in surface forcing
Replies: 12
Views: 3556

Re: version 340 stop before reading in surface forcing

Make the extension txt or log
by robertson
Fri Jul 24, 2009 2:18 pm
Forum: ROMS Installation
Topic: installation problem with pgi
Replies: 2
Views: 2113

Re: installation problem with pgi

PGF90/x86-64 Linux 7.2-3: compilation aborted The above is not a path it's just the name of the compiler. but actually compilation path is /opt/pgi/linux86-64/7.2/bin. /opt/pgi/linux86-64/7.2/bin is a symbolic link to /opt/pgi/linux86-64/7.2-3/bin You problem doesn't have anything to do with compil...
by robertson
Thu Jul 23, 2009 1:45 pm
Forum: ROMS Installation
Topic: compiling problem on pgi compiler
Replies: 1
Views: 1960

Re: compiling problem on pgi compiler

It looks like you have a couple problems: The build process should not be looking for ' pgi ' ('which pgi' from the error you posted), it should be looking for pgf90 . Did you modify FC in your Compilers/Linux-pgi.mk file? If so, change it back. when you set your NETCDF_INCDIR you put a space at the...
by robertson
Tue Jul 21, 2009 6:20 pm
Forum: ROMS Problems
Topic: problem with mpirun...
Replies: 4
Views: 3943

Re: problem with mpirun...

That HDF5 version (1.6.6) is much to old to be used with NetCDF-4. Perhaps you have a new version in a different location?
by robertson
Wed Jul 15, 2009 7:30 pm
Forum: ROMS Tools and Techniques
Topic: sec from "Plotting Package" results full black background
Replies: 2
Views: 1620

Re: sec from "Plotting Package" results full black background

The plotting package has been updated so that sec and cnt create plots with a white background and black foreground. See :arrow: this Trac ticket . csec and ccnt still take their background and foreground colors from the color palette you select in the .in script. Please update your code and recompi...
by robertson
Fri Jul 10, 2009 9:03 pm
Forum: ROMS Releases
Topic: Trac Upgraded to 0.11
Replies: 0
Views: 2904

Trac Upgraded to 0.11

Trac System Upgraded to 0.11 We have upgraded Trac to the latest version. The most noticeable difference is that you will no longer have to log in to view tickets. You will still have to log in to browse the source, view the timeline etc. The login procedure has changed: Go to https://www.myroms.or...
by robertson
Mon Jul 06, 2009 3:13 pm
Forum: ROMS Tools and Techniques
Topic: sec from "Plotting Package" results full black background
Replies: 2
Views: 1620

Re: sec from "Plotting Package" results full black background

As noted :arrow: here, cnt and sec are contour only black and white versions of ccnt and csec. Have you tried using csec with one of the gray palettes? That should give you images without color.

Note: I just updated the wiki page to clarify this a bit.
by robertson
Wed Jun 17, 2009 1:37 pm
Forum: ROMS Tools and Techniques
Topic: ROMS training: username request
Replies: 1
Views: 1272

Re: ROMS training: username request

What do you mean by "training dods.o3d.org"? What email address did you send your request to? The o3d.org server is not part of myroms.org so the user names and passwords for that server would be different. Please clarify what you are trying to do.
by robertson
Fri Jun 12, 2009 5:32 pm
Forum: ROMS Tools and Techniques
Topic: plotting upwelling problems
Replies: 2
Views: 1518

Re: plotting upwelling problems

Hi, A couple things are happening here. First is the fact that your PMIN and PMAX values are way out of range. If you look at the output from the ccnt command you will see from the last frame that the values are between ~14.61 and ~15.97. I would suggest using 14 and 16 instead of -2.0 and 28. These...
by robertson
Tue May 12, 2009 2:02 pm
Forum: ROMS Tools and Techniques
Topic: errors while compiling roms plot source code
Replies: 1
Views: 1300

Re: errors while compiling roms plot source code

check near the bottom of the following thread:

viewtopic.php?f=14&t=589
by robertson
Mon Apr 13, 2009 3:10 pm
Forum: ROMS Problems
Topic: problem about MPI process terminated unexpectedly
Replies: 2
Views: 1756

Re: problem when run the DAMEE application

I would guess that you are exceeding your system's file size limit with your output files. If the history file is near 2GB at the time of the crash, try splitting your outputs into multiple files. Read: https://www.myroms.org/wiki/index.php/ocean.in#Output_Frequency_Parameters Specifically NDEFHIS, ...
by robertson
Tue Mar 24, 2009 9:28 pm
Forum: ROMS Installation
Topic: Tutorial: Installing ROMS in Windows XP / Vista (via Cygwin)
Replies: 20
Views: 16565

Re: Tutorial: Installing ROMS in Windows XP / Vista (via Cygwin)

I don't know why you still don't have nf_test.exe. Are you sure make check completed successfully? Earlier in the ROMS compilation, netcdf.mod is copied from the NETCDF_INCDIR directory. One of three things is likely happening: When building NetCDF make install failed or was not executed Your NETCDF...
by robertson
Tue Mar 24, 2009 1:37 pm
Forum: ROMS Installation
Topic: Tutorial: Installing ROMS in Windows XP / Vista (via Cygwin)
Replies: 20
Views: 16565

Re: Tutorial: Installing ROMS in Windows XP / Vista (via Cygwin)

First, in cygwin (and any UNIX like envronment) ls, by default, hides "dot" files. That means any file that starts with a "." will not show up with a standard 'ls' command. To see dot files you must type ' ls -a '; type ' ls --help ' for further info and options. Second, NetCDF h...
by robertson
Mon Mar 02, 2009 3:47 pm
Forum: ROMS Installation
Topic: NETCDF4
Replies: 5
Views: 2732

Re: NETCDF4

MPICH2 is an MPI implementation. MPI is only used for distributed memory. For shared memory you will need to set USE_OpenMP in your build script . This will set the OpenMP flag for your compiler. I realize you don't wish to use NetCDF's parallel I/O but keep in mind that NetCDF Parallel I/O is only ...
by robertson
Mon Mar 02, 2009 3:47 am
Forum: ROMS Installation
Topic: NETCDF4
Replies: 5
Views: 2732

Re: NETCDF4

This indicates that you are still compiling against NetCDF-3. Remember that any NETCDF/HDF5 paths you set in you makefile will override the ones in the Linux-ifort.mk file. Likewise, NetCDF/HDF5 paths set in your build script will override your makefile AND Linux-ifort.mk . If you are using the buil...
by robertson
Fri Feb 27, 2009 2:41 pm
Forum: ROMS Installation
Topic: Compiling ROMS in parallel on 4 processors (2*Intel Core2)
Replies: 3
Views: 2582

Re: Compiling ROMS in parallel on 4 processors (2*Intel Core2)

I believe for Intel's MPI the executable is named mpiifort. What you'll want to do is turn on USE_MPIF90 Then edit your Compilers/Linux-ifort.mk file of you ROMS code. Around line 70 you will see: FC := mpif90 change this to: FC := mpiifort Then of course you'll want to make sure your PATH is set pr...
by robertson
Fri Jan 09, 2009 2:06 pm
Forum: ROMS Documentation
Topic: Wiki pages inaccessible
Replies: 1
Views: 2903

Wiki pages inaccessible

That is because those pages don't exist yet. Any link on the wiki that appears in green is to a page that does not yet exist. When you click on a link to a page that does not exist in the wiki it automatically tries to create that page. However, at this point only a few users are allowed to edit Wik...
by robertson
Wed Jan 07, 2009 6:31 pm
Forum: ROMS Tools and Techniques
Topic: RNT libcxa.so.5
Replies: 5
Views: 11806

Re: RNT libcxa.so.5

It appears that the mex file you're using ( /home/tiger/RNT/matlib/rnt/rnt_oa2d_mex.mexglx ) was compiled with the Intel Fortran compiler and you either don't have the Intel compiler or the lib directory for the Intel compiler is not in your library path. The error is telling you that rnt_oa2d_mex.m...
by robertson
Fri Oct 31, 2008 3:07 pm
Forum: ROMS Problems
Topic: SVN checkout error
Replies: 2
Views: 3407

Re: SVN checkout error

I have not been able to reproduce your error but The errors I see in the Apache logs are below: [Fri Oct 31 04:59:00 2008] [error] [client 202.36.29.1] Provider encountered an error while streaming a REPORT response. [500, #0] [Fri Oct 31 04:59:00 2008] [error] [client 202.36.29.1] A failure occurre...
by robertson
Fri Aug 22, 2008 5:01 pm
Forum: ROMS Installation
Topic: the installation of netcdf and roms
Replies: 5
Views: 6397

Re: the installation of netcdf and roms

Question: Which Fortran compiler (if any) do you have on your system? You have told ROMS to build with g95 but g95 is not in your path ( which: no g95... ). If you don't have a Fortran 90 compiler in your path it is more than likely that your NetCDF library was built without the Fortran 90 interface...
by robertson
Fri Aug 15, 2008 7:27 pm
Forum: ROMS Problems
Topic: Help - Running ROMS
Replies: 2
Views: 1537

Re: Help - Running ROMS

This is not an error, it is simply a report.
by robertson
Fri Jul 11, 2008 2:59 pm
Forum: ROMS Tools and Techniques
Topic: how to use roms plot package?
Replies: 19
Views: 8003

Re: how to use roms plot package?

The coastline is not needed when plotting the upwelling test case. You should set CST to F in your .in file so the plotting package will ignore the 7th input file. I have tried to make this a little clearer in the tutorial. Sorry for the lack of clarity regarding the fort.35 file. There is not a for...
by robertson
Mon Jul 07, 2008 8:39 pm
Forum: Meetings/Workshops
Topic: 8th Workshop on Adjoint Model Applications - First Notice
Replies: 0
Views: 1944

8th Workshop on Adjoint Model Applications - First Notice

The 8th Workshop on Adjoint Model Applications in Dynamic Meteorology The Chateau Resort and Conference Center in Tannersville, Pennsylvania, USA, May 18-22, 2009 The 8th Adjoint Workshop will be held 18-22 May 2009 at The Chateau Resort and Conference Center in Tannersville, Pennsylvania, USA. As ...
by robertson
Mon Jul 07, 2008 3:50 pm
Forum: ROMS Discussion
Topic: Problem installing plotting package
Replies: 3
Views: 1708

Re: Problem installing plotting package

As stated in the tutorial, you need to make sure that the same compiler is used for both NCAR Graphics (or NCL) and the ROMS plotting package. The following information was contained in the first google search result for '/usr/local/lib/libncarg_gks.a(gerlog.o):gerlog.f': It looks like you may be mi...
by robertson
Wed Jun 18, 2008 7:30 pm
Forum: Meetings/Workshops
Topic: 5th WMO International Symposium on Data Assimilation
Replies: 0
Views: 2326

5th WMO International Symposium on Data Assimilation

Fifth WMO International Symposium on Data Assimilation 5-9 October, 2009, Melbourne, Australia The 5th WMO International Symposium on Data Assimilation will be convened in the Southern Hemisphere springtime, 5-9 October, 2009 in Melbourne, Australia. The goals of the Symposium are: To assess recent...
by robertson
Wed Jun 18, 2008 4:00 am
Forum: ROMS Problems
Topic: Forum "search" problem...
Replies: 3
Views: 1460

Re: Forum "search" problem...

The search feature should be fixed now. Thanks for reporting the problem and thanks to user ocecept for describing the problem in a way that allowed me find it and fix it.
by robertson
Fri Jun 06, 2008 4:18 pm
Forum: ROMS Information
Topic: Issue with ROMS tidal forcing WIKI
Replies: 2
Views: 2708

The "contributions" tab at the top of each wiki page is where users can add notes or corrections to the wiki. Since I'm not sure what wiki page you are referring to (I'm guessing this one ) I can't make the correction/note. If you can navigate to the wiki page that needs the correction, cl...
by robertson
Tue Jun 03, 2008 6:52 pm
Forum: Job Opportunities
Topic: Tenure-Track Faculty Positions at USF
Replies: 0
Views: 1648

Tenure-Track Faculty Positions at USF

The College of Marine Science (CMS) at the University of South Florida (USF) invites applications for two tenure-track, nine-month academic faculty positions in Physical Oceanography. Appointments are expected to be at the Assistant Professor or Associate Professor rank. Salaries are negotiable and ...
by robertson
Thu May 08, 2008 5:28 pm
Forum: ROMS Installation
Topic: Using OPENMP on Sun AMD (intel) for solaris 10
Replies: 3
Views: 2050

I am not familiar with OpenMP but I would start by setting OMP_NUM_THREADS to 4 to match your 2x2 tiling. With 2x2 tiling you are telling ROMS to make 4 tiles but OpenMP will only give ROMS 2 threads if you have OMP_NUM_THREADS set to 2.
by robertson
Tue Apr 22, 2008 2:58 pm
Forum: ROMS Bugs
Topic: ROMS 3.0 make problems
Replies: 11
Views: 7782

The problem is with you linker (ld). Use google to search for "ld unrecognized option as-needed" for possible causes and solutions.

Good luck
by robertson
Tue Apr 22, 2008 2:34 pm
Forum: ROMS Installation
Topic: netcdf installation-gfortran
Replies: 11
Views: 8777

/shared/nagesh/gfortran/gcc-4.2/bin/../libexec/gcc/x86_64-unknown-linux-gnu/4.2.4/f951: error while loading shared libraries: libmpfr.so.1: cannot open shared object file: No such file or directory It's likely that gfortran you have installed was built with the MPFR library but you do not have that...
by robertson
Fri Apr 18, 2008 7:54 pm
Forum: ROMS Installation
Topic: makefile:381: *** target pattern contains no '%'. Stop.
Replies: 6
Views: 5866

The ROMS/Cygwin tutorial in the wiki has been changed to suggest using the command line subversion client within cygwin. Hopefully this will limit \r problems in the future.

https://www.myroms.org/wiki/index.php/ROMS_Cygwin
by robertson
Fri Apr 18, 2008 7:27 pm
Forum: ROMS Installation
Topic: Tutorial: Installing ROMS in Windows XP / Vista (via Cygwin)
Replies: 20
Views: 16565

I have updated the tutorial in the wiki to suggest using the cygwin command line svn client. If you have already installed cygwin you can run the setup.exe again and grab any packages you may have missed. There are three more packages listed than before.
by robertson
Thu Apr 17, 2008 1:45 pm
Forum: ROMS Problems
Topic: problem during make
Replies: 3
Views: 2557

You're on the right trac about the wrong number of threads. I believe you need to edit the ROMS/External/ocean_upwelling.in . You chose to run on 4 processors (-np 4) but the bold part of this line: Tile partition information for Grid 01: 0041x0080x0016 tiling: 001x001 tells me that NtileI and Ntile...
by robertson
Wed Apr 16, 2008 1:16 pm
Forum: ROMS Problems
Topic: problem during make
Replies: 3
Views: 2557

Have you tried compiling the model in serial (unset USE_MPI and USE_MPIF90 in your makefile) to make sure your Fortran compiler works? What Fortran compiler are you using? Based on your /usr/bin/cpp lines it looks like you're using g95 : /usr/bin/cpp -P -traditional -DMPI -DLINUX -DX86_64 -DG95 -D'R...
by robertson
Mon Apr 14, 2008 7:42 pm
Forum: ROMS Information
Topic: What is the output of DIAGNOSTICS_TS/UV?
Replies: 6
Views: 5785

Diagnostic information can be found by clicking "Model Diagnostics" in the left column of the main WikiROMS page.
by robertson
Thu Apr 10, 2008 8:52 pm
Forum: ROMS Information
Topic: What is the output of DIAGNOSTICS_TS/UV?
Replies: 6
Views: 5785

Since WikiROMS is now our documentation I changed that link to point to WikiROMS. Unfortunately that diagnostics page didn't get added to the wiki. I will add it to the wiki soon, hopefully tomorrow.
by robertson
Mon Mar 24, 2008 6:35 am
Forum: ROMS Discussion
Topic: roms-3.1 checkout
Replies: 1
Views: 1291

First of all it is not recommended to check out code from tags directory because running svn update at a later date will not update your copy of the code with bug fixes or improvements. The versions in the tags directory are more of a time line of major achievements in ROMS history. It is recommend ...
by robertson
Wed Feb 20, 2008 5:11 am
Forum: ROMS Installation
Topic: SmartSVN - try it!
Replies: 3
Views: 2714

I checked the logs and the only attempt I see from your user name to retrieve https://www.myroms.org/svn/src/trunk looks like it was made in a web browser. Have you been able to download the code via SVN in the past?
by robertson
Fri Feb 15, 2008 3:53 pm
Forum: ROMS Information
Topic: Movie on installing roms (via svn) and making a project
Replies: 9
Views: 5706

You can also download the move from the link below.

http://www.myroms.org/links/roms_project.mov

You may use this movie for any purpose you see fit as long as a) Rob Hetland is cited, and b) it is non-profit.
by robertson
Fri Feb 15, 2008 2:26 pm
Forum: ROMS Ecosystem
Topic: Initialization for Fasham and EcoSim BioToys applications
Replies: 15
Views: 11385

The initialization files for the BIO_TOY application are now on the datasets page.
by robertson
Tue Dec 11, 2007 4:40 pm
Forum: ROMS Installation
Topic: SVN Checkout error
Replies: 2
Views: 2013

Hi, The mismatch error you're seeing most likely points to Subversion being upgraded to 1.4.5 but some or all of the Subversion libraries not upgrading. How did you install subversion-1.4.5? Did you use a pre-compiled binary (RPM, Debian package, etc.) or did you compile from source. Was it installe...
by robertson
Tue Dec 11, 2007 4:33 pm
Forum: ROMS Discussion
Topic: SVN Checkout error
Replies: 1
Views: 1283

This post belongs in the ROMS Installation forum. I have posted my reply there. This topic is now locked. If you wish to post a reply do so here.
by robertson
Thu Nov 29, 2007 8:30 pm
Forum: ROMS Usage
Topic: how to radiate and damping out waves ?
Replies: 16
Views: 8285

Presentations from the 2007 ROMS workshop at UCLA can be found here:

http://www.myroms.org/index.php?page=ROMS_2007_agenda

Electronic versions of the posters that were presented can be found here:

http://www.myroms.org/Workshops/ROMS200 ... s/posters/
by robertson
Wed Oct 10, 2007 6:07 pm
Forum: ROMS Installation
Topic: svn checkout problem with roms3.0
Replies: 6
Views: 3113

I have looked at the svn and apache log files and it does not appear that user name pruthviraj has attempted to download the code, failed or otherwise. I can see your connections through a web browser. It could be a firewall or proxy server issue. SVN transmits data using the WebDAV protocol; perhap...
by robertson
Tue Sep 18, 2007 10:54 pm
Forum: Meetings/Workshops
Topic: 2007 ROMS/TOMS Workshop, Fifth Notice
Replies: 0
Views: 2219

2007 ROMS/TOMS Workshop, Fifth Notice

2007 ROMS/TOMS User Workshop and Community Sediment Transport Modeling (CSTM) Meeting UCLA, Los Angeles, October 1-5, 2007 Please check the following link for a PDF of the final program. http://www.myroms.org/Workshops/ROMS2007/Program_2007.pdf Notice we a map of the UCLA campus to help you get to ...
by robertson
Fri Sep 07, 2007 8:59 pm
Forum: Job Opportunities
Topic: USF Research Associates (post-doctoral)
Replies: 0
Views: 1662

USF Research Associates (post-doctoral)

USF Research Associates (post-doctoral) (12566 & 12567) The College of Marine Science, University of South Florida, seeks two Research Associates (post-doctoral) (#12566 & #12567) in coastal ocean circulation modeling and analyses. Successful candidates will engage in a coordinated program ...
by robertson
Tue Jul 17, 2007 8:52 am
Forum: ROMS Installation
Topic: An urgent problem about downloading ROMS by using SVN
Replies: 5
Views: 2734

I sent an email to all users with illegal characters (including spaces) in their user name several months back. Perhaps you missed it. please send an email to robertson@marine.rutgers.edu containing what you would like you new user name to be.
by robertson
Tue Jun 26, 2007 5:29 am
Forum: ROMS Installation
Topic: problem building netcdf-90 interface with ifort under cygwin
Replies: 3
Views: 3978

Hi, The issue with the configure script seems to be that ifort for windows likes to build object files with the .obj extension instead of the usual .o so the tests in the configure script can't find the resulting compiled files. My first idea was to change the OBJEXT variable to 'obj' but that cause...
by robertson
Fri Jun 22, 2007 8:09 pm
Forum: ROMS Installation
Topic: svn checkout
Replies: 7
Views: 4570

Your ROMS user name is George with a capital "G".

Code: Select all

svn checkout --username George https://www.myroms.org/svn/src/trunk my_roms_dir
Dave
by robertson
Wed Jun 20, 2007 4:55 pm
Forum: ROMS Installation
Topic: How can I get the tar file of ROMS 2.2 ?
Replies: 7
Views: 3648

Your user name is Povl (Capital P lower case ovl)and the error in the logs is password mismatch. Since you were able to log in to the forum to post your question, you must know you password. Perhaps you are typing it incorrectly. Remember that your password to access the svn repository is the same o...
by robertson
Tue Jun 05, 2007 7:48 pm
Forum: ROMS Installation
Topic: How can I get the tar file of ROMS 2.2 ?
Replies: 7
Views: 3648

You need to capitalize your user name, it's Yunli not yunli.

Try:

Code: Select all

svn checkout --username Yunli https://www.myroms.org/svn/tags/roms-2.2 mydir
by robertson
Mon May 14, 2007 3:13 pm
Forum: ROMS Discussion
Topic: ROMS Download
Replies: 4
Views: 2774

Re: can not download ROMS

It is possible that your svn client was not built with WebDAV support. It's more likely that your client was with WebDAV but was not built with SSL support. If you are running the command line client type svn --version . You should see a section similar to the following: The following repository acc...
by robertson
Mon May 14, 2007 4:22 am
Forum: ROMS Discussion
Topic: ROMS Download
Replies: 4
Views: 2774

Hi,

The address you need to enter into Tortoise is:

https://www.myroms.org/svn/src/trunk

The URL you entered is for Trac and should only be entered in a web browser.
by robertson
Mon Feb 19, 2007 4:18 pm
Forum: Job Opportunities
Topic: Research experience in Madeira Island
Replies: 0
Views: 2033

Research experience in Madeira Island

Research experience in Madeira Island As part of a research project in oceanography / fluid dynamics we are looking for students and/or newly graduates from the fields of Physics, Applied Mathematics, Computer Science, Engineering and related areas. The main objective of the project is to study asp...
by robertson
Thu Sep 21, 2006 8:30 pm
Forum: Meetings/Workshops
Topic: 2006 ROMS/TOMS European Workshop Invitation Letter
Replies: 0
Views: 2267

2006 ROMS/TOMS European Workshop Invitation Letter

2006 ROMS/TOMS European Workshop Invitation Letter

For those attendees needing an invitation to the workshop for visa purposes, you can download it here. Please print out the invitation, in color, and fill in your name, institution and presentation title (if applicable).
by robertson
Mon Apr 25, 2005 2:58 pm
Forum: Job Opportunities
Topic: 6 marine science positions at Australian National University
Replies: 0
Views: 2309

6 marine science positions at Australian National University

Below is a link to a PDF containing the six advertisements for junior and senior positions in ocean modeling at the Australian National University.

http://marine.rutgers.edu/po/download/misc/ANU_jobs.pdf
by robertson
Wed Apr 06, 2005 3:57 pm
Forum: Job Opportunities
Topic: Research/Senior Research Associate, U. of New South Wales
Replies: 0
Views: 2125

Research/Senior Research Associate, U. of New South Wales

THE UNIVERSITY OF NEW SOUTH WALES DEPARTMENT OF AVIATION Research Associate/ Senior Research Associate Wakes in the Natural Environment A Research Associate with expertise in numerical modelling of oceans using the Regional Ocean Modeling System (ROMS) is sought to work with a team of investigators...
by robertson
Mon Nov 22, 2004 8:48 pm
Forum: ROMS Information
Topic: ppt presentation of Venice European meeting
Replies: 2
Views: 2712

The presentations from the 2004 ROMS/TOMS European Workshop are available here and here.

On a more general note, presentations from other workshops are available here.

Happy Modeling!
by robertson
Wed Oct 06, 2004 8:28 pm
Forum: ROMS Information
Topic: ROMS, TOMS and IMCS logos
Replies: 0
Views: 1754

ROMS, TOMS and IMCS logos

Hi all,

There has been a few requests for the ROMS, TOMS and IMCS logos so I have created a web directory to facilitate these requests.

ROMS and TOMS
http://www.myroms.org/images/logos_internal/

IMCS
http://marine.rutgers.edu/po/images/logos_internal/

Cheers,

Dave
by robertson
Wed Sep 15, 2004 5:45 am
Forum: Meetings/Workshops
Topic: 2004 ROMS/TOMS Workshop T-shirt
Replies: 4
Views: 5221

2004 ROMS/TOMS Workshop T-shirt

We would like to order T-shirts for the ROMS/TOMS Workshop. Unfortunately, our budget will not allow us to offer the shirts free of charge. Instead, we would like to take orders from those interested in purchasing such a shirt. The cost will be between 16 and 20 U.S. Dollars. To insure that we can g...
by robertson
Fri Jul 30, 2004 7:49 pm
Forum: ROMS Documentation
Topic: ROMS/TOMS User Manual
Replies: 14
Views: 22902

ROMS/TOMS User Manual

Dear Users, We have begun developement on the ROMS/TOMS users manual. Since we are a community model, we have decided to make the developement of the manual a community effort as well. We started from the old SCRUM manual and plan to upgrade its information accordingly. Please visit: http://www.myro...
by robertson
Tue Mar 02, 2004 5:16 pm
Forum: Job Opportunities
Topic: Research Computing Specialist - IMCS, Rutgers
Replies: 0
Views: 2947

Research Computing Specialist - IMCS, Rutgers

RESEARCH COMPUTING SPECIALIST Oceanographic modeling and analysis Institute of Marine and Coastal Sciences Rutgers University, New Brunswick, New Jersey Minimum qualifications required are a bachelor’s degree in physical oceanography or a closely related field and scientific computing experience. J...
by robertson
Wed Sep 03, 2003 8:01 pm
Forum: Job Opportunities
Topic: Postdoctoral Fellowship
Replies: 0
Views: 3002

Postdoctoral Fellowship

The Monterey Bay Aquarium Research Institute (MBARI), with funding from the Sanctuary Integrated Monitoring Network (SIMoN) at the Monterey Bay National Marine Sanctuary (MBNMS), is seeking applicants for a postdoctoral appointment in the area of coastal ocean physical and biological coupling. For D...
by robertson
Wed Sep 03, 2003 7:55 pm
Forum: Job Opportunities
Topic: Postdoctoral Researcher
Replies: 0
Views: 2913

Postdoctoral Researcher

TITLE: Postdoctoral Researcher. The College of Oceanic and Atmospheric Sciences (COAS) at Oregon State University (OSU) invites applications for a full-time, fixed term, Research Associate (Postdoctoral) position. SALARY: $40,000-$41,000 APPLICATION CLOSING DATE: 6 October 2003 RESPONSIBILITIES: Us...
by robertson
Wed Sep 03, 2003 7:43 pm
Forum: Job Opportunities
Topic: Postdoctoral Researcher
Replies: 0
Views: 2744

Postdoctoral Researcher

TITLE: Postdoctoral Researcher. The College of Oceanic and Atmospheric Sciences (COAS) at Oregon State University (OSU) invites applications for a full-time, fixed term, Research Associate (Postdoctoral) position. SALARY: $40,000-$41,000 APPLICATION CLOSING DATE: 6 October 2003 RESPONSIBILITIES: Th...
by robertson
Wed Sep 03, 2003 7:07 pm
Forum: Job Opportunities
Topic: Research Associate (Postdoctoral) in Physical Oceanography
Replies: 0
Views: 2839

Research Associate (Postdoctoral) in Physical Oceanography

TITLE: Research Associate (Postdoctoral) in Physical Oceanography. A full-time, fixed-term annual appointment with renewal at the discretion of the principal investigators. SALARY: $42,000 APPLICATION CLOSING DATE: 15 September 2003 RESPONSIBILITIES: Conduct research involving the application of nu...
by robertson
Tue Aug 19, 2003 4:10 pm
Forum: Job Opportunities
Topic: Post-Doctoral Position in Ocean Modeling, RSMAS - U of Miami
Replies: 0
Views: 2979

Post-Doctoral Position in Ocean Modeling, RSMAS - U of Miami

The Rosenstiel School of Marine and Atmospheric Science (RSMAS) at the University of Miami invites applications for a post-doctoral position in the Division of Meteorology and Physical Oceanography (MPO). The position is available for a one year appointment, renewable for two additional years. The i...
by robertson
Mon Jun 30, 2003 2:00 pm
Forum: ROMS FAQ
Topic: What is ROMS?
Replies: 0
Views: 4780

What is ROMS?

The Regional Ocean Model System ( ROMS ) is a free-surface, hydrostatic, primitive equation ocean model that uses stretched, terrain-following coordinates in the vertical and orthogonal curvilinear coordinates in the horizontal. Initially, it was based on the S-coordinate Rutgers University Model (S...
by robertson
Mon Jun 30, 2003 2:00 pm
Forum: ROMS FAQ
Topic: Who developed ROMS?
Replies: 0
Views: 3937

Who developed ROMS?

ROMS has been developed over the last few years by the Rutgers University and UCLA ocean modeling groups. The primary developers of ROMS are: Dr. Hernan G. Arango Institute of Marine and Coastal Sciences Cook Campus, Rutgers University 71 Dudley Road New Brunswick, NJ, 08901-8521, USA OFF: (732) 93...
by robertson
Mon Jun 30, 2003 2:00 pm
Forum: ROMS FAQ
Topic: Is there a ROMS manual
Replies: 1
Views: 8146

Is there a ROMS manual

No yet. However, the code is well documented internally and we hope to have an user's guide soon. In the mean time, SCRUM manual can be used as reference.
by robertson
Mon Jun 30, 2003 2:00 pm
Forum: ROMS FAQ
Topic: Why does ROMS requires a special CPP?
Replies: 0
Views: 4339

Why does ROMS requires a special CPP?

As of ROMS 2.0 Der Mouse's CPP code is no longer neccessary. ROMS versions prior to 2.0 use extensive C-preprocessing to configure its various numerical and physical options. The parallel design of the code for both shared- and distributed memory computers is managed also with CPP definitions. This...
by robertson
Mon Jun 30, 2003 2:00 pm
Forum: ROMS FAQ
Topic: How to generate ROMS initial conditions NetCDF file?
Replies: 0
Views: 5082

How to generate ROMS initial conditions NetCDF file?

The initialization package can be used to generate ROMS initial conditions NetCDF file.
by robertson
Mon Jun 30, 2003 2:00 pm
Forum: ROMS FAQ
Topic: How to generate ROMS forcing conditions NetCDF file?
Replies: 0
Views: 4452

How to generate ROMS forcing conditions NetCDF file?

The forcing package can be used to build ROMS surface and bottom boundary conditions NetCDF file. This package also can be used to modify/append fields to an existing forcing NetCDF file.
by robertson
Mon Jun 30, 2003 2:00 pm
Forum: ROMS FAQ
Topic: How to generate ROMS climatology NetCDF file?
Replies: 1
Views: 5717

How to generate ROMS climatology NetCDF file?

The climatology package can be used to generate ROMS climatology NetCDF file. This package also can be used to modify/append fields to an existing climatology NetCDF file.
by robertson
Mon Jun 30, 2003 2:00 pm
Forum: ROMS FAQ
Topic: How do I make a bug report?
Replies: 0
Views: 3489

How do I make a bug report?

If you find a bug, please report it via the bug report form.
by robertson
Fri Jun 27, 2003 7:00 pm
Forum: Job Opportunities
Topic: UCLA Oceanic Modeler Position
Replies: 0
Views: 2556

UCLA Oceanic Modeler Position

UCLA OCEANIC MODELER Applications are invited for a researcher position in oceanic modeling in the Institute of Geophysics and Planetary Physics at UCLA. The level of appointment will be negotiated commensurate with professional experience. Candidates must practice oceanic dynamical theory and mode...