Search found 78 matches

by fdaryabor
Wed Jul 18, 2018 9:58 am
Forum: ROMS Discussion
Topic: problem in setting open boundary ...
Replies: 5
Views: 1078

Re: problem in setting open boundary ...

Dear turuncu,
Hi

You can try "Gra" option for the turbulence kinetic energy (TKE) instead "Cha" and see how's that.

LBC(isMtke) == Cha Clo Clo Clo ! mixing TKE :arrow: LBC(isMtke) == Gra Clo Clo Clo ! mixing TKE

good luck to you
Farshid
by fdaryabor
Fri Jun 08, 2018 11:26 am
Forum: ROMS Discussion
Topic: Nonbreaking wave-induced mixing in ROMS?
Replies: 7
Views: 1807

Re: Nonbreaking wave-induced mixing in ROMS?

Dear Ivica, Please have a look to "lmd_vmix.F " and the section, regarding to "Sum contributions due to internal wave breaking...", in fact non-breaking wave induced coefficient (Bv(i,j,k); (m2/s)) here is used to enhance the vertical mixing for momentum (Akv(i,j,k); (m2/s)) and tracer (Akt(i,j,k); ...
by fdaryabor
Fri Jun 01, 2018 3:07 pm
Forum: ROMS Discussion
Topic: Nonbreaking wave-induced mixing in ROMS?
Replies: 7
Views: 1807

Re: Nonbreaking wave-induced mixing in ROMS?

Yes, it's done by Wang et al., JGR 2010 based on Qiao et al, JPO 2004. I added it as a one of the switches (option) for vertical turbulent mixing :arrow: (lmd_vmix) to the CPP options list (ROMS 3.7), and is running now for the Mid-Atlantic Bight application :idea: . To extract wave induced mixing p...
by fdaryabor
Fri May 11, 2018 12:53 pm
Forum: ROMS Bugs
Topic: sustr and svstr Value has not been read
Replies: 11
Views: 2103

Re: sustr and svstr Value has not been read

Dear, Alright, use the following linux commands to convert nc2cdl. :arrow: ncdump -b c myfile.nc > myfile.cdl by the command "vim" or "gedit" (recommended for you to see as .txt file for edit) open myfile.cdl; :arrow: gedit myfile.cdl and also open "frcfile.cdl" from ../trunk/Data/ROMS/CDL; :arrow: ...
by fdaryabor
Thu May 10, 2018 7:26 pm
Forum: ROMS Bugs
Topic: sustr and svstr Value has not been read
Replies: 11
Views: 2103

Re: sustr and svstr Value has not been read

Dear,
Your attached file is completely wrong :shock: and it's not really readable for the ROMS, such attributions, dimensions and time format. I suggest you that follow directory :arrow: ".../trunk/Data/ROMS/CDL" it can help you to find your questions :?: . Good luck to you
Farshid
by fdaryabor
Tue May 08, 2018 8:15 am
Forum: ROMS Bugs
Topic: sustr and svstr Value has not been read
Replies: 11
Views: 2103

Re: sustr and svstr Value has not been read

Dear, As stated by Katherine and John, such errors :arrow: (GET_2DFLD - error while reading variable: or GET_3DFLD - error while reading variable:) are due to the definition of input variables. To avoid encountering such a problem is essential check consistency of the variables in ".nc" file with th...
by fdaryabor
Fri Mar 09, 2018 5:00 pm
Forum: ROMS Problems
Topic: CPU problem for the Nesting run
Replies: 5
Views: 1293

Re: CPU problem for the Nesting run

Dear Kate, I've tried for the two different "timestep" as follow :arrow: ; NTIMES == 1036800 3110400 DT == 900.0d0 300.0d0 NDTFAST == 30 30 & NTIMES == 3110400 9331200 DT == 300.0d0 100.0d0 NDTFAST == 50 Second one running too slow. What's your suggestion for having a proper timestep here? :idea: :w...
by fdaryabor
Fri Mar 09, 2018 4:33 pm
Forum: ROMS Problems
Topic: CPU problem for the Nesting run
Replies: 5
Views: 1293

Re: CPU problem for the Nesting run

Dear users, I think the problem can be because of the tiling computation :idea: . This is what I have :arrow:; Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 32 On-line CPU(s) list: 0-31 Thread(s) per core: 2 Core(s) per socket: 8 Socket(s): 2 I have 2 CPU sock...
by fdaryabor
Fri Mar 09, 2018 1:34 pm
Forum: ROMS Problems
Topic: CPU problem for the Nesting run
Replies: 5
Views: 1293

CPU problem for the Nesting run

Dear Users, Has anybody ever experienced the following problem? it has happened in the sixth year of the model run :!: :evil: . The model is configured with two, one-way nested domains. I don't know really :shock: , but I guess it can be because of the memory process and calculations carried out by ...
by fdaryabor
Wed Feb 28, 2018 1:53 pm
Forum: ROMS Problems
Topic: Contact point problem with salinity in Two Way Nesting run
Replies: 6
Views: 1975

Re: Contact point problem with salinity in Two Way Nesting r

Dear Eugen

I don't think there's actually any difference. Please take a look at ".../Nonlinear/nesting.F" and ".../Modules/mod_nesting.F". I refer you to John Wilkin comment in the following link, https://www.myroms.org/forum/viewtopic.php?f=14&t=4288
Good luck, Farshid :wink:
by fdaryabor
Wed Feb 28, 2018 9:36 am
Forum: ROMS Problems
Topic: Contact point problem with salinity in Two Way Nesting run
Replies: 6
Views: 1975

Re: Contact point problem with salinity in Two Way Nesting r

Dear Eugen Referring to the attached header file I recommend you to apply the following suggestions hope it can help you. 1: #define UV_SADVECTION ======> undef "UV_SADVECTION" 2: You have two options for the grid nesting "TWO_WAY, ONE_WAY". When NESTING option is switch ON, the model will run "TWO_...
by fdaryabor
Fri Jun 23, 2017 8:04 am
Forum: ROMS Problems
Topic: error in oa make file
Replies: 8
Views: 2785

Re: error in oa make file

Dear, In this case, make sure defined the LD_LIBRARY_PATH environment variables. Use the following command in the home directory that the path of your libraries is defined or not? [nishtha@localhost oa]$ echo $LD_LIBRARY_PATH Then you should to have the library path "/usr/local/lib" and "/usr/local/...
by fdaryabor
Thu Jun 22, 2017 8:31 am
Forum: ROMS Problems
Topic: error in oa make file
Replies: 8
Views: 2785

Re: error in oa make file

Dear,

When you use "gfortran" instead of "ifort" compiler, as Kate commented you should be add 'lnetcdf' and 'lnetcdff' together as follow,
'-lnetcdf -lnetcdff'

Hope it can help you,
Cheers,
by fdaryabor
Tue Jun 20, 2017 7:35 am
Forum: ROMS Discussion
Topic: Blow up after running for 2-3 days
Replies: 7
Views: 1158

Re: Blow up after running for 2-3 days

Hi
As I look on the domain not defined properly 'land/sea (mask)'.
Cheers
by fdaryabor
Wed May 06, 2015 5:07 am
Forum: ROMS Results
Topic: How to convert potential temperature to temperature
Replies: 6
Views: 4533

Re: How to convert potential temperature to temperature

Dear,

You can use the attachment file.

Hope can help you.
by fdaryabor
Thu Jun 12, 2014 2:56 am
Forum: ROMS Discussion
Topic: nesting blow up
Replies: 6
Views: 1545

Re: nesting blow up

Did you check time step of the baroclinic and barotropic mode for the both domains. And the time intervals to save data in hisfile and avgfile? You should be careful apply the refinement coefficient for those.

Good Luck!
by fdaryabor
Fri Apr 26, 2013 1:55 am
Forum: ROMS Problems
Topic: ROMS blows up
Replies: 6
Views: 3490

Re: ROMS blows up

Dear Chaos4u2, What kate suggest you is the one way to resolving problem. I recomend you, please try to avoiding option "Output Diagnostics File: ocean_dia.nc" for Output/Input Files in your simulation, and see how. Few reason can be for "BLOWS UP". 1- Input data, such as forcings and boundary data ...
by fdaryabor
Fri Apr 19, 2013 2:35 am
Forum: ROMS Discussion
Topic: Question about roms_tool?
Replies: 3
Views: 1009

Re: Question about roms_tool?

safoora,
Pls send your questions via my email;
farshiddaryabor@gmail.com
TQ
by fdaryabor
Thu Apr 18, 2013 1:41 am
Forum: ROMS Discussion
Topic: Question about roms_tool?
Replies: 3
Views: 1009

Re: Question about roms_tool?

Dear Safoora,
About what you ask me, is depend. Currently use the data what you have now. Then verify your results with observation/SODA.

Hope help you
by fdaryabor
Mon Apr 01, 2013 1:23 am
Forum: ROMS Discussion
Topic: how to make forcing with Matlab scripting?
Replies: 2
Views: 1179

Re: how to make forcing with Matlab scripting?

Hi, Safoora, If you looking for matlab code to make forcing file, pls refer to following link and register as user, then through download link you able to download ROMS_TOOLS package. You can find matlab cosde as "make_forcing.m". "http://www.romsagrif.org/index.php/download" Hope can help you and d...
by fdaryabor
Mon Mar 25, 2013 1:25 am
Forum: ROMS Discussion
Topic: Tidal Forcing in ROMS
Replies: 3
Views: 1258

Re: Tidal Forcing in ROMS

Hi,Taowang, For your case after make surface forcings and boundary conditions of domain, add tidal elevation (m) and tidal currents (m/s) to sea surface height and 2D momentum climatologies, respectively. Furthermore, you must be careful when add tidal forcings, since tidal forcings (TPXO6/TPXO7) ar...
by fdaryabor
Tue Mar 13, 2012 12:48 pm
Forum: ROMS Documentation
Topic: imposing tidal boundary conditions in parent and child 1 way
Replies: 5
Views: 5456

Re: imposing tidal boundary conditions in parent and child 1

Dear Dr Hi For tide simulation using ROMS (one-way nested domain) used TPXO.6 (25 km) as boundary condition for the parent domain (with 50 Km resolution), so that the parent provides boundary condition for the child ( with 9 Km resolution). Compare RMS (amplitude and phase) of the parent, child and ...
by fdaryabor
Thu May 20, 2010 5:42 am
Forum: ROMS Discussion
Topic: Warning during Comapilation
Replies: 1
Views: 1066

Warning during Comapilation

Dear All During compilation I faced to following massage mv a.out roms make:warning: Clock skew detected. Your build may be incomplete. I know by "make clean" for the other compiler can fix above massage, in the roms case is not correct. is anybody know how can I solve this warning massage. High app...
by fdaryabor
Thu Mar 18, 2010 6:38 am
Forum: ROMS Discussion
Topic: mpirun
Replies: 1
Views: 1572

mpirun

Dear all I have to use MPI, so I need know how can I set compiler "jobcomp" and the path variables for compiler. Actually I set compiler as follow: #!/bin/tcsh #################################################### # COMPILATION JOB # #################################################### # # set source...
by fdaryabor
Thu Nov 26, 2009 9:58 am
Forum: ROMS Usage
Topic: option for wind forcing
Replies: 15
Views: 6898

Re: option for wind forcing

Hi In order to the arango guide for ignore wind stress don't touch to subroutine. You have to zero all of the array of wind stress matrix for this case if you refer to 'make_forcing.m' in ROMSTOOLS in line that is for writing of wind stress in netcdf file you put u=0 and v=0 after 'horizontal extrap...
by fdaryabor
Thu Oct 01, 2009 2:57 am
Forum: ROMS Discussion
Topic: Figure out Vertical Section
Replies: 5
Views: 1691

Re: Figure out Vertical Section

Hi kate I checked again the model input (the looks is attached) in my idea should be right, but problem is still for figure out temp and salinity profile from the model output (the looks is attached. I will send you the all configurations for climatology run. Really appreciate for your guide. Best R...
by fdaryabor
Wed Sep 30, 2009 6:44 am
Forum: ROMS Discussion
Topic: Figure out Vertical Section
Replies: 5
Views: 1691

Re: Figure out Vertical Section

Hi kate Thanks for your response, what I want to say is the model's output for SST, Currents and SSH, are acceptable but the problem is with the vertical section of temperature and salinity in interior layers which has to be horizontal but what I got was vertical that's not right. since the model ou...
by fdaryabor
Tue Sep 29, 2009 3:51 am
Forum: ROMS Discussion
Topic: Figure out Vertical Section
Replies: 5
Views: 1691

Re: Figure out Vertical Section

Hi kate Thanks for your response, actually I run model climatology and got real results from model (SST, Currents, SSH), but I face to problem for figure out vertical section of temperature in the interior,in first survey I check vertical mixing scheme,I using Large, W.G., J.C. McWilliams, and S.C. ...
by fdaryabor
Mon Sep 28, 2009 8:13 am
Forum: ROMS Discussion
Topic: Figure out Vertical Section
Replies: 5
Views: 1691

Figure out Vertical Section

Dear all I use "Roms_Agrif" for Peninsular of Malaysia and sunda shelf ((99E 115E),(5S 10N)), horizontal resolution (1/6 deg), Number of layer 25, (theta_S=5, theta_b=0.4, hc=40),(hmin=50m, hmax=1000) and level of reference for geostrophy calculation is 100m. I face to problem to figure out vertical...
by fdaryabor
Sun Sep 27, 2009 4:18 am
Forum: ROMS Discussion
Topic: reading netcdf file in matlab
Replies: 5
Views: 1688

Re: reading netcdf file in matlab

Hi dhtjtks Dear my friend best guide for set netcdf library for your machine refer to downloading "toolboxes" in following address, http://roms.mpl.ird.fr/download.php in "Roms_Agrif" download "mexnc" and "mex60" and set netcdf library in "/home/.../Roms_tools/mexnc/mexopts.sh" and make sure path fo...
by fdaryabor
Thu Jun 11, 2009 3:01 am
Forum: ROMS Information
Topic: how build tidal forcing
Replies: 11
Views: 5111

Re: how build tidal forcing

Hi Also you can use matlab toolbox in Roms_Agrif following address: 1) http://roms.mpl.ird.fr/Data/Preprocessing_tools_08_04_2009.tar.gz 2) http://roms.mpl.ird.fr/Data/Tides_2006_10_05.tar.gz Best Regards F.Daryabor Center for Tropical and Climate Change System Faculty of Science and Technology Nati...
by fdaryabor
Thu Jan 29, 2009 9:54 am
Forum: ROMS Discussion
Topic: convert spherical coordinate to cartesian
Replies: 2
Views: 1467

Re: convert spherical coordinate to cartesian

Hi
Tanks so much Kate
I have following data by following metrics, I need script or command for convert them to same metrics.
size(u) size(v) lon_rho lat_rho
104x102 103x103 104x103 104x103
could you please guide me.
Best Regards
F.Daryabor
by fdaryabor
Tue Jan 20, 2009 1:38 am
Forum: ROMS Discussion
Topic: convert spherical coordinate to cartesian
Replies: 2
Views: 1467

convert spherical coordinate to cartesian

Hi Everybody
I want convert dimension of variables for example variable of 'u' recognized by dimension of 'time', 's_rho', 'eta_rho' and 'xi_u' to 'time','depth','lon_rho' and 'lat_rho',could you please help me.
Best Regards
F.Daryabor
by fdaryabor
Sun Jan 18, 2009 8:12 am
Forum: ROMS Discussion
Topic: convert sigma coordinate to depth coordinate
Replies: 5
Views: 7056

Re: convert sigma coordinate to depth coordinate

Hi my friend Thanks so much for your guide. I have model output to following form for 5 years. roms_avg_Y1M1,roms_avg_Y1M2,...,roms_avg_Y1M12 roms_avg_Y2M1,roms_avg_Y2M2,...,roms_avg_Y2M12 roms_avg_Y3M1,roms_avg_Y3M2,...,roms_avg_Y3M12 roms_avg_Y4M1,roms_avg_Y4M2,...,roms_avg_Y4M12 roms_avg_Y5M1,rom...
by fdaryabor
Wed Jan 14, 2009 1:23 am
Forum: ROMS Discussion
Topic: convert sigma coordinate to depth coordinate
Replies: 5
Views: 7056

convert sigma coordinate to depth coordinate

Hi Everybody ROMS is in xi,eta,sigma coordiantes. I want to convert sigma co-ordinates to depth coordinates. I will get the output nc file in the following form. Everybody could help me for guide or have script for converting thanks so much. netcdf roms_avg_Y1M1 { dimensions: xi_rho = 103 ; xi_u = 1...
by fdaryabor
Tue Dec 23, 2008 3:32 am
Forum: ROMS Bugs
Topic: prepare model output for long simulation
Replies: 0
Views: 1034

prepare model output for long simulation

Hi
I want model output file obtained from long simulation in a specific form for example I want run model for 5 years thus I want output file be to following form:
roms_avg_Y1M1.nc, roms_avg_Y1M2.nc, roms_avg_Y1M3.nc,...
Everybody can help me thanks so much.
Best Regards
F.Daryabor
by fdaryabor
Fri Dec 05, 2008 3:05 am
Forum: ROMS Discussion
Topic: plote diagnostics
Replies: 0
Views: 699

plote diagnostics

Hi
when I want show salinity and temperature vertical profile from 'roms_gui' vertical profile of salinity and temperature is wrong near coast. could you please guide me for solve this problem.
Best Regards
F.Daryabor
by fdaryabor
Fri Dec 05, 2008 1:26 am
Forum: ROMS Discussion
Topic: Tide
Replies: 1
Views: 1003

Tide

Hi When I choice 'tide' option in cppdef.h I face to following error, could you please help me for solve problem. Best Regards F.Daryabor GET_TCLIMA -- Read climatology of tracer 1 for time = 345.0 GET_TCLIMA -- Read climatology of tracer 1 for time = 15.00 GET_TCLIMA -- Read climatology of tracer 2...
by fdaryabor
Fri Oct 24, 2008 1:36 am
Forum: ROMS Discussion
Topic: Fiting Coordinate system
Replies: 7
Views: 1771

Re: Fiting Coordinate system

Hi Kate I attach for you 'romstools_param.m' file, this is alone the file for edit by user, you will see that I must edit only grid parameters for building the grid, surface forcing parameters for getting the wind and other surface fluxes and getting the initial and the lateral boundary conditions. ...
by fdaryabor
Thu Oct 23, 2008 1:32 am
Forum: ROMS Discussion
Topic: Fiting Coordinate system
Replies: 7
Views: 1771

vertical profile

Hikate
I attached temperature vertical profile yield of Roms output near coasts I'm looking for near coast looks should be wrong, because depth is inversely proportional to temperature. Could you please tell me why are wrong?
Best Regards
F.Daryabor
by fdaryabor
Mon Oct 20, 2008 1:39 am
Forum: ROMS Discussion
Topic: Fiting Coordinate system
Replies: 7
Views: 1771

Re: BLOWUP

Hi Kate Thank so much, I face with following error. Please you guide me for resolve it. Best Regards F.Daryabor ****************************************** ABNORMAL JOB END USER TERMINATED ****************************************** VMAX = 0.630E+39 IMAX,JMAX = 187 78 IINT,IEXT = 28 1 MAIN - number of...
by fdaryabor
Thu Oct 16, 2008 1:58 am
Forum: ROMS Discussion
Topic: Fiting Coordinate system
Replies: 7
Views: 1771

Fiting Coordinate system

Hi
I want Run model for South China Sea with Lonmin=98, Latmin=0 and Lonmax=125, Latmax=30.
I tried find optimum values, dl,theta_s, theta_b, hc and N for my domain but I can't find
optimum values.
Everybody could help me thank so much.
Best Regards
F.Daryabor
by fdaryabor
Mon Oct 13, 2008 2:28 am
Forum: ROMS Discussion
Topic: make_clim
Replies: 0
Views: 942

make_clim

Hi When I run 'make_clim' I face following error: Compute geostrophic currents time index: 1 of total: 12 ??? qhull precision warning: The initial hull is narrow (cosine of min. angle is 1.0000000000000002). A coplanar point may lead to a wide facet. Options 'QbB' (scale to unit box) or 'Qbb' (scale...
by fdaryabor
Tue Sep 30, 2008 1:32 am
Forum: ROMS Discussion
Topic: RUN
Replies: 3
Views: 1836

Re: RUN

Hi Thank So Much Kate I use Agrif ROMS and in this ROMS version I have STATION, FLOATS and SEDIMENT options, but I don't selection them. The model resolution is: Resolution: 1/6 deg Create the grid file... LLm = 95 MMm = 84 Fill the grid file... Compute the metrics... Min dx=18.1122 km - Max dx=18.5...
by fdaryabor
Mon Sep 29, 2008 10:10 am
Forum: ROMS Discussion
Topic: RUN
Replies: 3
Views: 1836

RUN

Hi I have changed 'theta S', 'theta b' and 'hc' for my domain few time and time step but every time I run model face to following error (BLOWUP: South China Sea 1080 ntimes Total number of timesteps for 3D equations. 2400.00 dt Timestep [sec] for 3D equations 45 ndtfast Number of 2D timesteps within...
by fdaryabor
Fri Sep 26, 2008 1:21 am
Forum: ROMS Installation
Topic: compiling
Replies: 3
Views: 1668

Re: compiling

Hi kate I have question, when I checked up Roms_Agrif directory I saw some of scripts was undefined for my case 'REGIONAL' and some of parameters for tracers (Temperature and Salinity) and baroclinic and barotropic mode was undefine thus I defined them for model ans so in main.F for example was unde...
by fdaryabor
Thu Sep 25, 2008 6:06 am
Forum: ROMS Installation
Topic: compiling
Replies: 3
Views: 1668

compiling

Hi When compile I face to following error: OPERATING SYSTEM IS: Linux PROCESSOR IS: i686 cp: No match. /bin/rm -rf core *.o AGRIFZOOM/AGRIF_YOURFILES/*.o *.i *.s *.f *.trace *.mod /bin/rm -rf roms mpc cross_matrix cppcheck srcscheck checkkwds partit ncjoin ncrename ./rii_files fpp -free -P -I../netc...
by fdaryabor
Wed Sep 03, 2008 7:12 am
Forum: ROMS Discussion
Topic: ana_initial.F
Replies: 4
Views: 1360

Re: ana_initial.F

Hi
This is Roms_Agrif version
Best Regards
F.Daryabor
by fdaryabor
Tue Sep 02, 2008 1:47 am
Forum: ROMS Discussion
Topic: ana_initial.F
Replies: 4
Views: 1360

ana_initial.F

Hi
Could you please explain for me following parameters exiting in ana_initial.F include: 'Z0','THKNSS',and 'STRAT'

Best Regards
F.Daryabor
by fdaryabor
Fri Aug 08, 2008 7:17 am
Forum: ROMS Discussion
Topic: test_vgrid.m
Replies: 6
Views: 2516

Re: test_vgrid.m

Hi 1- do you defined your grid from 30m under surface to 1000m? 2- Is shallow water your study region ? 3- Is concept of h, study region depth? when I want set teta_s and teta_b for 5000m depth and switch index=0 for both column section and row section I face following error: >> [z,sc,Cs]=scoord(500...
by fdaryabor
Fri Aug 08, 2008 4:36 am
Forum: ROMS Discussion
Topic: test_vgrid.m
Replies: 6
Views: 2516

Re: test_vgrid.m

Hi Thanks so much my friend. I defined function parameters [z,sc,Cs]=scoord(h,theta_s,theta_b,Tcline,N,kgrid,column,index,plt) but when I want plot S-coordinate I face with following error: >>[z,sc,Cs]=scoord(40,6,0.4,10,15,0,0,1,1) ??? Error using ==> set Bad value for axes property: 'XLim' Values ...
by fdaryabor
Thu Aug 07, 2008 4:41 am
Forum: ROMS Discussion
Topic: test_vgrid.m
Replies: 6
Views: 2516

Re: test_vgrid.m

Hi
Thanks so much for your guide.
Could you explain me, how can I use from this tool (scoord.m) for test theta_s,theta_b,hc and N?
Best Regards
F.Daryabor
by fdaryabor
Wed Aug 06, 2008 6:02 am
Forum: ROMS Discussion
Topic: test_vgrid.m
Replies: 6
Views: 2516

test_vgrid.m

Hi
I'm going to test the effects of theta_s,theta_b,hc and N by using '../Preprocessing/test_vgrid.m', but doesn't exist this script in directory.
Could you guide me

Best Regards
F.Daryabor
by fdaryabor
Wed Aug 06, 2008 5:17 am
Forum: ROMS Discussion
Topic: romstools_param.m
Replies: 0
Views: 896

romstools_param.m

Hi Could you more explain following concept of each parameters and those function in model: Roa, theta_s, theta_b, hc, hmin, hmax_coast, rtarget, n_filter_deep_topo, n_filter_final, tini,Yorig , SPIN_Long concept of tini=0 is 1st Jan, tinni=1 is 2st Jan,..., etc if Day of initialisation for climatol...
by fdaryabor
Tue Aug 05, 2008 6:12 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Hi When I execute 'jobcomp' automatically create 'Makedefs' in Compile directory you say me, 'Just find this file and save if for your records'. I don't understand concept of this sentence. Please kindly could more explain me. I found your paper and was very useful for me Thanks so much for anything...
by fdaryabor
Thu Jul 31, 2008 7:44 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Hi I can't downloading full text your paper, namely 'A method for computing horizontal pressure-gradiant force in an ocean model with a non-aligned vertical coordinate. Journal of Geophysical Research 108 (C3),3090,2003' please kindly Could you send me I need understand concept of 'hereafter SH91' i...
by fdaryabor
Thu Jul 31, 2008 6:25 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Hi Could you specify me, which executable files must place into ../bin directory? After place executable files into ../bin directory. I must place ../bin path into PATH in .cshrc? I check .cshrc that is include: # .cshrc # User specific aliases and functions alias rm 'rm -i' alias cp 'cp -i' alias m...
by fdaryabor
Thu Jul 31, 2008 5:59 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Hi Thank so much for anythings. I need use of ROMS_AGRIF results for my ph.d thesis for South China Sea. In ROMS exist twin Compile directory '/home/ROMSTOOLS/Compile' and '/home/ROMSTOOLS/Roms_tools/Compile' I find 'Makedefs' file within both of them. I don't understand your aim 'saving the file fo...
by fdaryabor
Wed Jul 30, 2008 6:03 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Hi 1- I typed "make tools" in '../Roms_tools/Roms_Agrif' directory for creates executable files but I face to this message: Makefile:5: Makedefs: No such file or directory make: *** No rule to make target `Makedefs'. Stop I have only following execute files in Roms_Agrif directory Makedefs.generic M...
by fdaryabor
Wed Jul 23, 2008 8:26 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Hi I go to ncrename.F in Roms_Agrif but I can't do your guide, can you more explain me following guide 'Do do so, you MUST DESTROY netCDF variable "time_step" in you restart file which you want to treat as initial. Rename it to be something else, say use ncrename restart_file_name.nc time_step Xime_...
by fdaryabor
Wed Jul 23, 2008 7:52 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Tank so much
I need understand, how can I manually replace climatology data and wind forcing myself.
For example I need replace COADAS05 and QUIKSCAT, which file or code can do this way.
Best Regards
F.Daryabor
by fdaryabor
Tue Jul 22, 2008 6:53 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Hi
Tank so much
Can you explain this cod 'NRREC' in initial: NRREC filename
1

Best Regards
F.Daryabor
by fdaryabor
Sun Jul 20, 2008 5:05 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

Re: roms.in

Hi
I check my file size,I have a 2 GB limit on system, my out put files 'roms_avg.nc','roms_his.nc' and 'roms_diags_avg.nc' are more 2 GB size, around 2.9 GB, How can I to exceed that?
can you guide me?

Best Regards
F.Daryabor
by fdaryabor
Fri Jul 18, 2008 9:28 am
Forum: ROMS Discussion
Topic: roms.in
Replies: 17
Views: 5175

roms.in

Hi 1- I want run model for 1 year (2005), I decrease the time step but I have following error: 4175 2.41609 7.509198465E-03 1.3246625E+01 1.3254135E+01 4.8568477E+15 0 4176 2.41667 7.508518509E-03 1.3246628E+01 1.3254136E+01 4.8568477E+15 0 NF_FWRITE ERROR: nf_put_vara netCDF error code = 22 WRT_DIA...
by fdaryabor
Wed May 14, 2008 7:39 am
Forum: ROMS Bugs
Topic: Compiling the model
Replies: 1
Views: 1376

Compiling the model

Hi
when execute ' ./jobcomp' I face to follow error:

gmake: *** No rule to make target `ropigrid.o', needed by `roms'. Stop.

please you guide me for solve this problem

Best Regards
F.Daryabor
by fdaryabor
Wed May 14, 2008 5:05 am
Forum: ROMS Bugs
Topic: Running the model
Replies: 0
Views: 1324

Running the model

Hi
when execute './roms roms.in' I have follow error

READ_INP ERROR while reading block with keyword 'auxiliary_history_fields'.


READ_INP ERROR: A total of 1 configuration errors discovered.

please you help me for solve this problem

Best Regards
F.Daryabor
by fdaryabor
Fri Apr 25, 2008 4:22 am
Forum: ROMS Installation
Topic: ROMS COMPILING
Replies: 1
Views: 2204

ROMS COMPILING

Hi In page 21 of user guide line "ROMS can be compiled by running the UNIX tcsh script ~/Roms_tools/Run/jobcomp. Jobcomp should be able to recognize your system. It has been tested on Linux, IBM, Sun and Compaq systems. On Linux PCs, the default compiler is the GNU g77, but it is possible to uncomme...
by fdaryabor
Tue Apr 22, 2008 5:15 am
Forum: ROMS Problems
Topic: Compiling the model
Replies: 2
Views: 2147

Re: Compiling the model

hi I have error in create make_bry but I skip of it and when I execute './jobcomp' in shell script I will have follow errors: AGRIF_FILES/modinitbis.F:27: error: keys_agrif.h: No such file or directory AGRIF_FILES/modinitbis.F:60: error: include_agrif.h: No such file or directory AGRIF_FILES/modini...
by fdaryabor
Mon Apr 21, 2008 9:18 am
Forum: ROMS Problems
Topic: Compiling the model
Replies: 2
Views: 2147

Compiling the model

hi I have error in create make_bry but I skip of it and when I execute './jobcomp' in shell script I will have follow errors: AGRIF_FILES/modinitbis.F:27: error: keys_agrif.h: No such file or directory AGRIF_FILES/modinitbis.F:60: error: include_agrif.h: No such file or directory AGRIF_FILES/modinit...
by fdaryabor
Mon Apr 21, 2008 8:37 am
Forum: ROMS Problems
Topic: make_bry
Replies: 1
Views: 948

make_bry

Hi when I execute make_bry after make_clim, my computer will restart and unable to create 'xxx_frc.nc', 'xxx_ini.nc' and 'xxx_clm.nc' in '/root/ROMSTOOLS/Roms_tools/Run/ROMS_FILES'. matlab will only create 'xxx_grd.nc' , another time when I test make_bry in matlab I have follow error: >> make_bry Ma...
by fdaryabor
Mon Apr 21, 2008 5:48 am
Forum: ROMS Problems
Topic: make_grid
Replies: 2
Views: 1470

Hi, subs is the name of a variable in the program, but is also the name of a matlab function. "which subs" will tell you if you have the subs function and in which directory it is. If you do, try removing that directory from your matlab path. Tank you my friend for your guide. Best Regards F.Daryabor
by fdaryabor
Tue Apr 15, 2008 5:44 am
Forum: ROMS Installation
Topic: make_grid
Replies: 0
Views: 1186

make_grid

hi When I execute make_grid in matlab for Linux system I have follow error: make_grid Making the grid: ../Run/ROMS_FILES/roms_grd.nc Title: Benguela Test Model Resolution: 1/3 deg Create the grid file... LLm = 23 MMm = 31 Fill the grid file... Compute the metrics... ??? Error: File: subsref.m Line: ...
by fdaryabor
Tue Apr 15, 2008 12:49 am
Forum: ROMS Problems
Topic: make_grid
Replies: 2
Views: 1470

make_grid

Hi When I execute make_grid in matlab I see follow error: >> make_grid Making the grid: ../Run/ROMS_FILES/roms_grd.nc Title: Benguela Test Model Resolution: 1/3 deg Create the grid file... LLm = 23 MMm = 31 Fill the grid file... Compute the metrics... ??? Error: File: subsref.m Line: 128 Column: 9 "...
by fdaryabor
Wed Mar 26, 2008 1:50 am
Forum: ROMS Installation
Topic: svn error
Replies: 5
Views: 2011

You are compiling svn from sources? Is there any binary available for your system? What system is it, anyway? You'd probably get more helpful replies from the svn site than from the ROMS site. Thankful Kate, I try doing your guide. Best Regards F.Daryabor I cant solve problem my svn error. Please g...
by fdaryabor
Tue Mar 25, 2008 12:56 am
Forum: ROMS Installation
Topic: svn error
Replies: 5
Views: 2011

kate wrote:You are compiling svn from sources? Is there any binary available for your system? What system is it, anyway? You'd probably get more helpful replies from the svn site than from the ROMS site.

Thankful Kate, I try doing your guide.

Best Regards
F.Daryabor
by fdaryabor
Mon Mar 24, 2008 7:56 am
Forum: ROMS Installation
Topic: svn error
Replies: 5
Views: 2011

svn error

Hi
When I execut './configure' for subversion-1.4.6 I have following error:

'configure: error: no suitable apr found'

Please anyone confronting this problem guide me.

Best Regards
F.Daryabor
by fdaryabor
Mon Mar 24, 2008 7:04 am
Forum: ROMS Installation
Topic: Getting Started
Replies: 0
Views: 1072

Getting Started

Hi Please anyone confronting following problem guide me. In launch a Matlab session in the directory: ~/Roms_tools/Run, when I Run the 'start.m' script, I confronting following message: >> cd Roms_tools/ >> cd Run/ Add the paths of the different toolboxes /bin/bash: .mysystem: Permission denied ??? ...
by fdaryabor
Mon Mar 24, 2008 5:20 am
Forum: ROMS Installation
Topic: libdap
Replies: 0
Views: 871

libdap

User Dear & Lady I am new user ROMS. When I installing libdap after Type './configure' and 'make' I confronting this message after Type 'make check 'make[3]: *** [check-TESTS] Error 1 make[3]: Leaving directory `/home/farshid/libDAP/libdap-3.7.10/tests' make[2]: *** [check-am] Error 2 make[2]: Leavi...