Search found 166 matches

by susonic
Tue Mar 19, 2024 4:23 am
Forum: ROMS Discussion
Topic: Issue with WEC_VF in ROMS-SWAN coupled model
Replies: 0
Views: 8

Issue with WEC_VF in ROMS-SWAN coupled model

Hello, We are currently using the ROMS-SWAN coupled model. The COAWST version we're using is 3.8, and there are no issues when running ROMS or SWAN individually. However, when attempting the coupling, especially with #define WEC_VF, we are encountering the following message. For your information, we...
by susonic
Wed Jan 10, 2024 1:35 am
Forum: ROMS Installation
Topic: COAWST JOE_TC case compile error
Replies: 9
Views: 14274

Re: COAWST JOE_TC case compile error

I am using COAWST model (V3.8) with ROMS and SWAN couple. I tried to compile the RIP_CURRENT case and faced with this error. I had no problem compile with ROMS only. I only get this error when I compile with SWAN only or ROMS & SWAN. I am using ifort(intel18). Netcdf(4.6.1) Total log file from c...
by susonic
Tue Jun 14, 2022 2:01 am
Forum: ROMS Discussion
Topic: too high bottom temperature result in estuary
Replies: 6
Views: 9700

Re: too high bottom temperature result in estuary

#define TS_C4HADVECTION #define TS_U3VADVECTION needs to be written as #define TS_U3HADVECTION #define TS_C4VADVECTION Seems like you provide 6 hourly wind stress while the heat flux is coming from mean value. I would not recommend diurnal_srflux if this is the case. From what I experienced, it inc...
by susonic
Sat Mar 05, 2022 10:49 am
Forum: ROMS Discussion
Topic: DIAG speed trouble 20.125553145124616. Blowing-up: Saving latest model state into RESTART file
Replies: 6
Views: 3801

Re: DIAG speed trouble 20.125553145124616. Blowing-up: Saving latest model state into RESTART file

Well if that is the case, First of all, I would plot every snapshot of temperature, salinity, current and sea surface height variable. And also I would run the model without surface forcing and lateral boundary condition(closed). If the model is stable without forcing(surface/lateral), then I would ...
by susonic
Fri Mar 04, 2022 9:56 am
Forum: ROMS Discussion
Topic: DIAG speed trouble 20.125553145124616. Blowing-up: Saving latest model state into RESTART file
Replies: 6
Views: 3801

Re: DIAG speed trouble 20.125553145124616. Blowing-up: Saving latest model state into RESTART file

Dear Sankar,

I just saw that your E-P file shows large value which is possibly filled with blank or NaN value.
Please check out fresh water flux file.

-Joonho
by susonic
Fri Nov 19, 2021 9:16 am
Forum: ROMS Discussion
Topic: The model blows up in the first step
Replies: 4
Views: 5009

Re: The model blows up in the first step

1. I see your nothern zeta,vbar and ubar value are 0. 2. Your rx0 value of the nesting model is too high. 3. It is not possible reason for blowing up, but I was wondering setting the boundary condition of the northern area as gradient for tracers? Also western is set as a gradient instead of close. ...
by susonic
Tue May 12, 2020 7:19 am
Forum: ROMS Adjoint
Topic: Adjoint model blow up
Replies: 13
Views: 15536

Re: Adjoint model blow up

I would suggest use Cha for zeta (no Che) Fla for 2d momentum (no Sch) Cla for all 3d value including Nonlinear model use also Same mixing/viscosity coefficient for NLM ADM. I saw zero bottom drag coefficient in your ocean.in. Is there a reason for 0 ? I don't know the reason but I suspect that the ...
by susonic
Sat Sep 21, 2019 1:59 am
Forum: ROMS Discussion
Topic: Assimilation of SSH
Replies: 0
Views: 1265

Assimilation of SSH

Hello everyone,

In ROMS 4dvar, we can assimilate the observed ssha to the model. When assimilate the ssha, I was wondering how assimilated ssha influence the other variable such as temperature and salinity? I was trying to find the code regarding this issue, but I couldn't.

-Joonho
by susonic
Mon Nov 12, 2018 6:27 am
Forum: ROMS Discussion
Topic: Temperature significantly near land areas
Replies: 4
Views: 2937

Re: Temperature significantly near land areas

I think your set up for boundary condition is not common set up.

Why don't you give below boundary condition and see if the result change.

For free surface, Chapman
2d momentum(Ubar, Vbar), Flather
3d momentum(Uvel, Vvel), Clamp
MTKE, Gradient
Tvar (TS), Clamp

-JH
by susonic
Fri Nov 09, 2018 3:09 am
Forum: ROMS Bugs
Topic: Error compiling ROMS with new flag SINGLE_PRECISION (svn928)
Replies: 7
Views: 7604

Re: Error compiling ROMS with new flag SINGLE_PRECISION (svn

Thank you for your answer Dr.Arango. I've got more question. You mentioned that If the 1D variable arguement to mp_bcastf is singe precison, it will usee routine mpbcastf_1d in distribute.F. But my understanding looking at the code is if the single precision is defined, ROMS will use mp_bacastf_1dp ...
by susonic
Wed Nov 07, 2018 1:11 pm
Forum: ROMS Bugs
Topic: Error compiling ROMS with new flag SINGLE_PRECISION (svn928)
Replies: 7
Views: 7604

Re: Error compiling ROMS with new flag SINGLE_PRECISION (svn

Thank you for your report. I also faced with same situation as you mentioned and was about to report.
by susonic
Thu Aug 30, 2018 8:25 am
Forum: ROMS Discussion
Topic: ROMS blows up "DIAG speed trouble"
Replies: 4
Views: 3486

Re: ROMS blows up "DIAG speed trouble"

First of all, check out the barotropic time step as Kate mentioned above. Secondly, I saw several weird option with your boundary condition. I saw gradient condition for temp and salt at the northern boundary. For West, I saw gradient condition for temp and salt(Not closed). I was wondering whether ...
by susonic
Wed Aug 08, 2018 11:35 pm
Forum: ROMS Problems
Topic: AVERAGES_DETIDES result problem
Replies: 10
Views: 12399

Re: AVERAGES_DETIDES result problem

Regarding this issue,
please give definition to your tide file with all available point when you build a tide file(say u,v,rho,psi dimension).

-JH
by susonic
Tue Nov 28, 2017 5:00 am
Forum: ROMS Discussion
Topic: unrealistic pressure gradient forming along bathymetry
Replies: 10
Views: 10068

Re: unrealistic pressure gradient forming along bathymetry

Would you show us the log file?

-JH
by susonic
Tue Dec 20, 2016 10:20 pm
Forum: ROMS Discussion
Topic: Blow up ROMS model.
Replies: 2
Views: 2903

Re: Blow up ROMS model.

Kates's FAQ would be helpful to you.

For me, I would save every snapshot as possible as I can(here give NHIS==1), and then I plot every field

along all levels. You will find something.

-JH
by susonic
Sat Aug 27, 2016 12:24 pm
Forum: ROMS Problems
Topic: Temperature Difference from ROMS to HYCOM
Replies: 9
Views: 10924

Re: Temperature Difference from ROMS to HYCOM

For your information, you'd better run the PGE test with homogeneous(no stratification).
by susonic
Mon Aug 01, 2016 6:07 am
Forum: ROMS Discussion
Topic: sponge layer
Replies: 1
Views: 2925

Re: sponge layer

Hi,
The name in the code 'fac' means factor.

Therefore fac determines that the largest value of the viscosity(or diffusivity) in your model boundary.

For example, if you set 4.0_r8 and your viscosity is 10 m2/s(in ocean.in), you will have maximum 40 m2/s along your model boundary.

-JH
by susonic
Sun Jun 12, 2016 12:03 pm
Forum: ROMS Usage
Topic: MAIN: Abnormal termination: BLOWUP.
Replies: 18
Views: 12882

Re: MAIN: Abnormal termination: BLOWUP.

Oh! I saw wrong log file(I should have read third one). Sorry for the wrong post. Yes, like Kate mentioned, I also recommend you to try shorter time step. I also have a question about your boundary condition. As far as I know, the conventional boundary condition for the sea surface and barotropic ve...
by susonic
Sun Jun 12, 2016 2:47 am
Forum: ROMS Usage
Topic: MAIN: Abnormal termination: BLOWUP.
Replies: 18
Views: 12882

Re: MAIN: Abnormal termination: BLOWUP.

Hi,
You are not allowed to have zero value in your depth.
Check out more information on the below website.

https://myroms.org/forum/viewtopic.php? ... w=previous
viewtopic.php?f=23&t=2546
by susonic
Sun Feb 14, 2016 6:16 am
Forum: ROMS Discussion
Topic: Model crashing at a certain baroclinic time step
Replies: 3
Views: 2625

Re: Model crashing at a certain baroclinic time step

What is your minimum depth?
What if you run the model without WET_DRY?
by susonic
Tue Jan 26, 2016 6:52 am
Forum: ROMS Discussion
Topic: Early blowing of model simulation
Replies: 4
Views: 3040

Re: Early blowing of model simulation

My suggestions are
1.Try different horizontal advection scheme (say U3 instead of C4)
2.Try quadratic drag instead of linear drag(UV_QDRAG instead of UV_LDRAG)
3.Try different vertical turbulent scheme(say LMD or MY2.5 instead of GLS)
-JH
by susonic
Tue Jan 12, 2016 6:53 am
Forum: ROMS Problems
Topic: Unrealisitic thickness of mixed layer
Replies: 15
Views: 18734

Re: Unrealisitic thickness of mixed layer

Minor stuff: I guess you are using 4 times daily surface forcing and I don't think you need to use diurnal srflux in your cpp. Wind data is critical for your mixed layer depth calculation as Duran mentioned above. BTW, is your SST reasonable compare with OBS? My suggestion is 1. Use Akima 4th order ...
by susonic
Sat Jan 09, 2016 10:57 am
Forum: ROMS Usage
Topic: Currents unrealistically fast
Replies: 6
Views: 5969

Re: Currents unrealistically fast

Would you show us the log file? Right now I doubted the vertical turbulence model, K-epsilon which is pretty sensitive. My recommandation is that use different mixing (say, K-kl, k-w). Log file can give us more information about the causes of blowing up.
-JH
by susonic
Wed Dec 30, 2015 10:53 am
Forum: ROMS Discussion
Topic: Issue with thermocline in ROMS output
Replies: 3
Views: 3068

Re: Issue with thermocline in ROMS output

Check out the cyclone strength(Zonal and Meridonal wind) from WRF output and see if it's reasonable. You are giving very large bottom drag coefficient now. I was wondering whether this large value influence the thermocline depth. Try different vertical turbulent closure(say MY2.5, GLS) What is the h...
by susonic
Sun Dec 13, 2015 4:58 pm
Forum: ROMS Discussion
Topic: Issue with thermocline in ROMS output
Replies: 3
Views: 3068

Re: Issue with thermocline in ROMS output

How did you give the surface forcing time interval(here, wind will be the critical factor)?

What are the horizontal and vertical resolutions?

Which scheme did you use for the vertical turbulent closure? (say, MY2.5, LMD, GLS, etc)
by susonic
Wed Nov 11, 2015 7:11 am
Forum: ROMS Problems
Topic: model blow-up due to abnormal velocity
Replies: 8
Views: 8337

Re: model blow-up due to abnormal velocity

1. What if you run the model without tide? Does it still blow up?

2. What if you reduce the time step? Say, half from current time step.

-JH
by susonic
Tue Sep 29, 2015 4:52 am
Forum: ROMS Adjoint
Topic: Can't run my IS4D-Var case Gnorm = NaN
Replies: 8
Views: 7559

Re: Can't run my IS4D-Var case Gnorm = NaN

I checked out the log file you attached several times but it is difficult to diagnose the causes of NaN value.

By the way, your Haney(rfactor) and Beckman & Haidvogel number is quiet high compare with known value(say, rfactor < 0.2) which means you did not smooth the bottom topography much.
by susonic
Mon Sep 28, 2015 4:08 am
Forum: ROMS Adjoint
Topic: Can't run my IS4D-Var case Gnorm = NaN
Replies: 8
Views: 7559

Re: Can't run my IS4D-Var case Gnorm = NaN

Also, I noticed that, when the model only includes the SLA data or the SST data in the observation file, the model rejected most of them, but if the model includes both the SLA data and the SST data, all the observation data can be accepted by the model. For above situation, try to use super observ...
by susonic
Mon Sep 28, 2015 3:58 am
Forum: ROMS Adjoint
Topic: Can't run my IS4D-Var case Gnorm = NaN
Replies: 8
Views: 7559

Re: Can't run my IS4D-Var case Gnorm = NaN

I've never done SANITY_CHECK before. But I compiled with SANITY_CHECK and faced with same error message as you noted above(with gfortran). Maybe code developer can helped this out to solve the problem. I saw the log file you attached and found TLM increments are zero even though ROMS continuing the ...
by susonic
Sun Sep 27, 2015 7:45 pm
Forum: ROMS Adjoint
Topic: Can't run my IS4D-Var case Gnorm = NaN
Replies: 8
Views: 7559

Re: Can't run my IS4D-Var case Gnorm = NaN

Hi,
Does your domain include equator?
If it's ok for you, I want to see your model domain.

-JH
by susonic
Thu Jul 16, 2015 5:11 pm
Forum: ROMS Wish List
Topic: Wish list
Replies: 2
Views: 5203

Re: Wish list

Ok, Dr.Arango. I will retry that model again. Thank you for your reply.

-JH
by susonic
Mon May 04, 2015 7:13 am
Forum: ROMS Wish List
Topic: Wish list
Replies: 2
Views: 5203

Wish list

Dear ROMS developers, I know that there are lots of to do list ahead of you, but I'd like to add one more wish list. I'm currently using a two way nesting in ROMS and this is very useful and powerful tool to see the regional phenomena with one time calculation. While running the model, I'm also cons...
by susonic
Sat Mar 21, 2015 10:21 am
Forum: ROMS Ecosystem
Topic: Nesting about NPZD model
Replies: 0
Views: 3595

Nesting about NPZD model

Dear Developers,

I have a simple question.
Can ROMS simulate bio-physical (like NPZD model) using two way coupling?

-JH
by susonic
Sat Mar 21, 2015 10:17 am
Forum: ROMS Problems
Topic: Question about Nesting
Replies: 0
Views: 2058

Question about Nesting

Dear developers and users, In nesting application, if I want to use triply nested refiment grid and one additional nested grid (just like below figure) what should be the NestLayers and GridsInLayer be like? I read users should set NestLayers = 3 GridsInLayer = 1 2 1 in the ROMS wiki. https://www.my...
by susonic
Thu Mar 19, 2015 5:13 am
Forum: ROMS Tools and Techniques
Topic: About chlolophyll in NPZD model
Replies: 3
Views: 4539

Re: About chlolophyll in NPZD model

Kunal & Zhang,

Thank you for your reply.

I know that the Fennel type bio model has a Chlorophyll variable. But I just want to start the bio-physical model as simple as possible.
Thanks for the reference.

Best,

-JH
by susonic
Thu Mar 12, 2015 5:03 am
Forum: ROMS Discussion
Topic: 'zeta' in ROMS
Replies: 9
Views: 72853

Re: 'zeta' in ROMS

Hi Luke,

How can I get the matlab script?
Sould I contact to Willis or
Would you send the script to my e-mail or upload to this post?
ocean0510@gmail.com

-JH
by susonic
Tue Mar 10, 2015 12:08 pm
Forum: ROMS Discussion
Topic: 'zeta' in ROMS
Replies: 9
Views: 72853

Re: 'zeta' in ROMS

I also agree with Luke's opinion.
I have been trying to find a way to remove the steric signal from SSH.
But since I'm a novice user of ROMS, I do not know how to do it.
Are there any recommendation or tips to do it?
Any answer would be appreciated.

JH
by susonic
Fri Mar 06, 2015 12:52 am
Forum: ROMS Tools and Techniques
Topic: About chlolophyll in NPZD model
Replies: 3
Views: 4539

About chlolophyll in NPZD model

Dear ROMS Users,

I am trying to calculates chlolophyll concentration from the output of NPZD model.

I was wondering how can I calculate the chlolophyll concentration.

Would you show me the way how to calculate the chlolophyll?

Formulae or matlab mfile would be very helpful.

Thank you.

-JH
by susonic
Thu Jan 15, 2015 1:52 pm
Forum: ROMS Discussion
Topic: About imposing Holland Model in ROMS on an idealized domain
Replies: 1
Views: 2406

Re: About imposing Holland Model in ROMS on an idealized dom

Did you run the model without tide?

Did you run the model without holland wind input and put constant or 0 wind?

-JH
by susonic
Tue Dec 16, 2014 5:43 am
Forum: ROMS Information
Topic: Question about Sea level
Replies: 5
Views: 7068

Re: Question about Sea level

Hi Dr.Arango, Thank you very much for your reply. Domain averaged volume can get through the log file from ROMS, right? I can't log in the computer for some reason, right now. I will plot domain volume with a time series as soon as I reach there. By the way, I also ran the model with same domain and...
by susonic
Mon Dec 15, 2014 4:21 pm
Forum: ROMS Problems
Topic: humidity in Bulk flux.F
Replies: 3
Views: 3569

Re: humidity in Bulk flux.F

Yes. It looks reasonable kludge. Thank you for your post, Dr.Lanerolle. The original ROMS code in bulk_flux.F cff=(0.7859_r8+0.03477_r8*TairC(i))/ & & (1.0_r8+0.00412_r8*TairC(i)) e_sat=10.0_r8**cff ! saturation vapor pressure (hPa or mbar) vap_p=e_sat*RH ! water vapor pressure (hPa or mbar)...
by susonic
Sun Dec 14, 2014 5:00 pm
Forum: ROMS Problems
Topic: humidity in Bulk flux.F
Replies: 3
Views: 3569

humidity in Bulk flux.F

ROMS can get either specific or relative humidity as a forcing input. And ROMS has three ways to calculate longwave radiation. When we calculate net longwave radiation internally (with LONGWAVE defined) ROMS requests humidity(RH, 412 line in bulk_flux.F) and this time ROMS does not know wheather thi...
by susonic
Sat Dec 13, 2014 8:34 am
Forum: ROMS Information
Topic: Question about Sea level
Replies: 5
Views: 7068

Re: Question about Sea level

Maybe my question was too naive and also I did not understand the theory well. So I change my question. In Pacific basin, I ran ROMS for decadal order. The forcing is derived from AR4 and AR5(IPCC). After I finished the calculation, I saw the zeta in ROMS was becoming larger as time went by. First c...
by susonic
Wed Dec 10, 2014 6:44 am
Forum: ROMS Information
Topic: Question about Sea level
Replies: 5
Views: 7068

Re: Question about Sea level

As far as I know, ROMS is a Bousnessq approximated model which the desnsity field is fixed.

But as Dr.Arango mentioned, the zeta in ROMS seems varying with respect to density variation.

How do I understand about the zeta in ROMS?
by susonic
Wed Oct 22, 2014 2:43 am
Forum: ROMS Discussion
Topic: decreasing trend in bottom layer salinity ...
Replies: 4
Views: 3316

Re: decreasing trend in bottom layer salinity ...

Can I see your domain and the area problem occuring? Is it far from the boundary?

Have you ever changed the RDRG2 value? Mine is (0.0025 and the many test cases in ROMS are 0.003)

-JH
by susonic
Fri May 16, 2014 3:02 am
Forum: ROMS Discussion
Topic: lower temp, salt value at open east bounday move in domain
Replies: 1
Views: 2342

Re: lower temp, salt value at open east bounday move in doma

Why don't you switch off the M2NUDGING?
How did you set the TNUD, M3NUD and OBCFACTOR in ocean.in file?

This one is little different issue but does it work LONGWAVE_OUT with undefined BULK_FLUX?
It may not harm the lateral boundary value but I'm just curious.

-JH
by susonic
Fri May 09, 2014 4:00 am
Forum: ROMS Discussion
Topic: 'zeta' in ROMS
Replies: 9
Views: 72853

Re: 'zeta' in ROMS

Dear code developer and users, Recently I was told that there is a branch of ROMS which can add steric effect. That model is developed by Song and it is not a open source code. These days the climate variability is becoming more important and I think that it is necessary to consider the steric heigh...
by susonic
Wed Apr 23, 2014 8:05 am
Forum: ROMS Tools and Techniques
Topic: Circumpolar grid
Replies: 5
Views: 4253

Re: Circumpolar grid

I sincerely appreciate your file.
It will be very helpful.
Thank you so much.

Best,
-JH
by susonic
Tue Apr 22, 2014 10:49 pm
Forum: ROMS Tools and Techniques
Topic: Circumpolar grid
Replies: 5
Views: 4253

Re: Circumpolar grid

Hi,

Is there a toolbox to generate attached figure like domain?
by susonic
Thu Feb 21, 2013 11:51 am
Forum: ROMS Discussion
Topic: river salinity overshoot
Replies: 11
Views: 10377

Re: river salinity overshoot

1. What about the depth from the river source point to the river mouth?
Does it vary?
2. How about change the river starting point?(ie. masking above the curving point and starting from it)
by susonic
Thu Feb 21, 2013 2:24 am
Forum: ROMS Discussion
Topic: river salinity overshoot
Replies: 11
Views: 10377

Re: river salinity overshoot

Well, actually I experienced that kind of problem many moons ago. 1. At that time I was giving only salinity on and the problem was fixed when I give both temperature and salinity on. But in your case, you already tried that before right? 2. Is your model including tide? If so, what happen if you un...
by susonic
Thu Feb 21, 2013 1:31 am
Forum: ROMS Discussion
Topic: river salinity overshoot
Replies: 11
Views: 10377

Re: river salinity overshoot

What happen if you give sources at whole vertical layer?
by susonic
Sun Feb 03, 2013 11:13 am
Forum: ROMS Discussion
Topic: Problem with the river discharge
Replies: 6
Views: 5593

Re: Problem with the river discharge

I believe that you have used the climatological monthly windstress data.
Why don't you use daily mean or 6 hourly wind data?
I'm sure that you will get a better result.
-JH
by susonic
Thu Oct 11, 2012 1:30 am
Forum: ROMS Results
Topic: cuase of the temperature rise
Replies: 3
Views: 5359

Re: cuase of the temperature rise

Hi, Kate. Thanks for the reply.

My ROMS case is calculating the heat flux via the bulk formulae.

Attached figures are the yearly mean, surface and bottom level avergaged temperature variation for 41 years.

The model domain is North pacific basin (E98~W76, S20~N65).
by susonic
Tue Oct 09, 2012 4:56 am
Forum: ROMS Results
Topic: cuase of the temperature rise
Replies: 3
Views: 5359

cuase of the temperature rise

Dear users, In the climatology run, either using Levitus T,S data or longterm averaged value from OGCM (SODA, ECCO) for the ocean initial state and COADS or the ECMWF mean data for the surface forcing, I found that the temperature sharply rises on first year in most cases. And also many literature s...
by susonic
Sat Sep 08, 2012 7:57 am
Forum: ROMS Bugs
Topic: Grid generator
Replies: 2
Views: 3024

Re: Grid generator

Hi Kate,

Thank you for your reply and the useful paper link.

I want to see the result of the differences between the regional (Pacific ocean) which used different model boundary condition and the Global ocean model that has no boundary condition.

-JH
by susonic
Sun Sep 02, 2012 12:45 pm
Forum: ROMS Bugs
Topic: Grid generator
Replies: 2
Views: 3024

Grid generator

Dear Users,

Are there any grid generator program which is useful for the global domain?

-JH
by susonic
Wed May 02, 2012 2:47 am
Forum: ROMS Discussion
Topic: model blows up when using bulk forcing..
Replies: 4
Views: 4637

Re: model blows up when using bulk forcing..

Did you fix the problem?

I've just noticed that there is no boundary condition for M3 in your application.

I would recommend you to check out the current right before the model blow up.

Cheers,

-JH
by susonic
Fri Mar 30, 2012 3:28 pm
Forum: ROMS Problems
Topic: Problem with an assimilation of temperature
Replies: 1
Views: 2084

Problem with an assimilation of temperature

Dear users, I had run a model with using 4Dvar data assimilation. Temperature and salinity profile are used to assimilate. I ran 2 cases, January and August. Assimilated temperature on January seems pretty reasonable compare with obs data but the problem occurs on August. The temperature in August i...
by susonic
Sun Mar 04, 2012 5:29 am
Forum: ROMS Tools and Techniques
Topic: About minimum depth
Replies: 6
Views: 7429

Re: About minimum depth

Thank you for your detailed comment and adding an entry of WikiROMS.
That is kind of you to do so.
And I'm sure that users can get this fundamental information via the WikiROMS.

Regards,

-JH
by susonic
Sat Mar 03, 2012 2:24 pm
Forum: ROMS Tools and Techniques
Topic: About minimum depth
Replies: 6
Views: 7429

Re: About minimum depth

Thnank you for your reply, Dr. Arango. Good clue.

So, we have to set non-zero value as a minimum depth in order not to make the vertical level thickness zero.

-JH
by susonic
Fri Mar 02, 2012 3:44 pm
Forum: ROMS Tools and Techniques
Topic: About minimum depth
Replies: 6
Views: 7429

About minimum depth

Dear ROMS users,

I was wondering why we set minimum depth in ROMS ?
by susonic
Thu Sep 22, 2011 12:58 am
Forum: ROMS Problems
Topic: Problems reading climatological files
Replies: 9
Views: 5417

Re: Problems reading climatological files

Hi,

Did you check out the variables in varinfo.dat file whether they matches
with the variables in your climatology file?
by susonic
Fri Jul 22, 2011 5:17 pm
Forum: ROMS Discussion
Topic: Problem with model start
Replies: 6
Views: 4075

Re: Problem with model start

Thank you for your reply, Kate. Yes, you are exatly right about what you said. The problem occurred what I put the number of forcingfile did not match what really exist. My mistake. Now I've learned more about how to find a solution from error. I appreciate your instruction Kate. Thank you very much...
by susonic
Fri Jul 22, 2011 1:26 pm
Forum: ROMS Discussion
Topic: Problem with model start
Replies: 6
Views: 4075

Re: Problem with model start

Thank you for your reply, Kate. 3007 !----------------------------------------------------------------------- 3008 ! Load I/O information into structure. 3009 !----------------------------------------------------------------------- In inp_par.f90. There is Load I/O section. 3044 ! Initialize and loa...
by susonic
Thu Jul 21, 2011 1:18 am
Forum: ROMS Discussion
Topic: Problem with model start
Replies: 6
Views: 4075

Re: Problem with model start

Hi Kate, Thank you for your reply. With debugger, I got below message. Model Input Parameters: ROMS/TOMS version 3.5 Thursday - July 21, 2011 - 10:13:41 AM ----------------------------------------------------------------------------- 0: Subscript out of range for array s%files (inp_par.f90: 3063) su...
by susonic
Wed Jul 20, 2011 1:02 pm
Forum: ROMS Discussion
Topic: Problem with model start
Replies: 6
Views: 4075

Problem with model start

Dear ROMS users, I encountered this problem only with specific case. I ran same domain with three different dimension in new pc, Quad core, 16GB RAM, SUSE 11.2, 3.6.3 netcdf, PGI fortran, mpich2-1.2.1, svn 564. case 1 dimension 88*96*20 case 2 dimension 177*194*20 case 3 dimension 292*332*20 The pro...
by susonic
Tue Jul 05, 2011 1:22 am
Forum: ROMS Usage
Topic: nested grids
Replies: 5
Views: 4364

Re: nested grids

There are two more. One from UCLA and the other from AGRIF.

As far as I know, AGRIF can do two way nesting.

Check this out.

http://roms.mpl.ird.fr/
by susonic
Thu Jun 16, 2011 10:10 am
Forum: ROMS Tools and Techniques
Topic: Simple question about conversion factor
Replies: 6
Views: 6641

Re: Simple question about conversion factor

Then the monthly ERA-40 data is probably averaged value from 6 hourly data.

Thank you very much for your replies.

-JH
by susonic
Wed Jun 15, 2011 1:04 pm
Forum: ROMS Tools and Techniques
Topic: Simple question about conversion factor
Replies: 6
Views: 6641

Re: Simple question about conversion factor

Hi back, Thank you for your note. I tried to search in google and got an answer like below. http://stommel.tamu.edu/~baum/ecmwf.html 2. The "Surface solar radiation" in "W m**-2 s" needs to be converted into a "shortwave radiation flux" in "W m**-2". shortwave...
by susonic
Wed Jun 15, 2011 2:18 am
Forum: ROMS Tools and Techniques
Topic: Simple question about conversion factor
Replies: 6
Views: 6641

Re: Simple question about conversion factor

Any suggestion, please?
by susonic
Tue Jun 14, 2011 6:17 am
Forum: ROMS Tools and Techniques
Topic: Simple question about conversion factor
Replies: 6
Views: 6641

Simple question about conversion factor

Hi,

I'm trying to use ERA40 forcing. The solar radiation unit is w/m^2/s.

I need to convert this to w/m^2 which is unit for ROMS.

What should I do?

Sorry for asking basic question.

-JH
by susonic
Sun May 22, 2011 3:28 am
Forum: ROMS Problems
Topic: nesting grids
Replies: 4
Views: 3774

Re: nesting grids

Are there any specific reasons why you want to use tide information from
large domain result?

-JH
by susonic
Sat May 21, 2011 2:15 pm
Forum: ROMS Usage
Topic: unexpected temperature distribution ...
Replies: 3
Views: 3952

Re: unexpected temperature distribution ...

Before you think about the wrong use of horizontal/vertical diffusion cpp option,
did you check out the value of surface forcing whether it's reasonable?

Sometimes we find some weird value in the forcing file due to mistake
from the building script.
by susonic
Sat May 21, 2011 12:54 am
Forum: ROMS Usage
Topic: unexpected temperature distribution ...
Replies: 3
Views: 3952

Re: unexpected temperature distribution ...

I can't see the images.

Would you attach them?
by susonic
Fri May 13, 2011 1:48 am
Forum: ROMS Discussion
Topic: model blowing up at exact the same model time!!!why??
Replies: 7
Views: 4247

Re: model blowing up at exact the same model time!!!why??

I mixed up with your answer. I edited my answer.
So, both of your model(large and nested domain) are initialized with climatology T and S? And the nested domain blows up? Can I see figures of your horizontal and vertical
speed at the blowing time?
by susonic
Fri May 13, 2011 1:08 am
Forum: ROMS Discussion
Topic: model blowing up at exact the same model time!!!why??
Replies: 7
Views: 4247

Re: model blowing up at exact the same model time!!!why??

Are you doing one-way nesting ?

If so, is your initial file also from larger domain?
by susonic
Tue Mar 29, 2011 6:37 am
Forum: ROMS Information
Topic: Question about Pair
Replies: 4
Views: 7223

Re: Question about Pair

Thank you for your answer, Mr.Warner. I downloaded sea level pressure and surface pressure from NCEP reanalysis version 1. I plotted same time step of both dataset(see attached) The general features of the ocean looks about the same although there is a small wave like motion in the surface pressure....
by susonic
Mon Mar 28, 2011 12:59 am
Forum: ROMS Information
Topic: Question about Pair
Replies: 4
Views: 7223

Re: Question about Pair

Thank you for your reply, Mr.Hadfield.

So, if I can get the sea level pressure, then I'd better use it.

But if I can not get the sea level pressure, I can also use the surface pressure (or surface air

pressure) as an alternative since it is expected showing negligible effect.
by susonic
Sat Mar 26, 2011 3:54 pm
Forum: ROMS Information
Topic: Question about Pair
Replies: 4
Views: 7223

Question about Pair

Dear Users,

There are two different surface pressure variable from atmospheric model such as NCEP.

The one is surface pressure and the other is sea level pressure.

I was wondering which one should I use when I use 'Pair' in the bulk formulae.

Regards,

-Peter
by susonic
Fri Mar 11, 2011 1:05 pm
Forum: ROMS Adjoint
Topic: Backwards trajectory
Replies: 7
Views: 10403

Re: Backwards trajectory

Thanks for your message and link, David.

I'll follow your suggestion.

Regads,

-JH
by susonic
Fri Mar 11, 2011 3:45 am
Forum: ROMS Adjoint
Topic: Backwards trajectory
Replies: 7
Views: 10403

Re: Backwards trajectory

Thanks for your notes, Ivica and Rodrigo.

So, I've got two options.

1. Modify the step_floats.F and interp_floats.F. and run the ADJOINT model with using floats.
2. Use history file to trace back.
by susonic
Thu Mar 10, 2011 1:38 am
Forum: ROMS Adjoint
Topic: Backwards trajectory
Replies: 7
Views: 10403

Backwards trajectory

Dear ROMS users,

I was wondering whether ROMS can track back the orginal source place using adjoint model with floats?

-JH
by susonic
Sun Jan 16, 2011 3:16 pm
Forum: ROMS Tools and Techniques
Topic: Error msg from d_ssh_obs.m
Replies: 0
Views: 1973

Error msg from d_ssh_obs.m

Hi folks, I've encountered a problem when I use d_ssh_obs.m First of all, when I executed d_sst_obs.m, there was no any problem. But when I executed d_ssh_obs.m, it gave me the below error message. h has the following dimensions (input order): 1) eta_rho = 55 2) xi_rho = 56 h loaded into an array of...
by susonic
Thu Jan 06, 2011 3:52 am
Forum: ROMS Information
Topic: compile problem in R4DVAR
Replies: 5
Views: 6876

Re: compile problem in R4DVAR

Hi, Dr. Arango. Thank you for your reply.

At first, I used original(wrong) ARPACK but later I used a right one which you are describing above (I wrote about that).


You are right about the mpif.h. It does not exist in the original ARPACK library.


Thank you for your note.

-JH
by susonic
Wed Jan 05, 2011 12:38 pm
Forum: ROMS Information
Topic: compile problem in R4DVAR
Replies: 5
Views: 6876

Re: compile problem in R4DVAR

I'm back to here to report the solution which I was stuck in before. I was trying to run the example, WC13 from recent assimilation Workshop. Thanks to the detailed explanation, I was able to run the I4DVAR. To run the I4DVAR, one need to compile the ARPACK tools before they run the model. I compile...
by susonic
Mon Jan 03, 2011 2:46 pm
Forum: ROMS Information
Topic: compile problem in R4DVAR
Replies: 5
Views: 6876

compile problem in R4DVAR

Hi all, I have encountered the compiling error when I tried to use the R4DVAR. I used build.bash and got below result /opt/mpich2/bin/mpif90 -O3 -tp core2-64 /home/ocean/model/trunk32/project/WC13/R4DVAR/Build/esmf_roms.o /home/ocean/model/trunk32/project/WC13/R4DVAR/Build/master.o /home/ocean/model...
by susonic
Sat Sep 25, 2010 12:05 pm
Forum: ROMS Problems
Topic: Intel’s new i7 980x CPU gives disappointing speedup
Replies: 48
Views: 78444

Re: Intel’s new i7 980x CPU gives disappointing speedup

Hi Mr.Ban, Did you fix the problem ? I had faced with similar problem which you mentioned above. Recently, I tried with updated ROMS svn 514 and it shows better performance than previous ROMS version. Dr.Arango amended some bugs with parrallel and I believe that the amending brought better result. W...
by susonic
Tue Sep 07, 2010 11:12 am
Forum: ROMS Problems
Topic: unrealistic high temperature near the Changjiang estuary
Replies: 7
Views: 5903

Re: unrealistic high temperature near the Changjiang estuary

I had faced with similar situation before. I gave only salinity at that time. It was solved with both temperature and salinity on with my river forcing. See this disscussion, https://www.myroms.org/forum/viewtopic.php?f=31&t=867&hilit=susonic Now I don't have a good solution but I doubt whet...
by susonic
Tue Sep 07, 2010 12:58 am
Forum: ROMS Problems
Topic: unrealistic high temperature near the Changjiang estuary
Replies: 7
Views: 5903

Re: unrealistic high temperature near the Changjiang estuary

Hi,

Did you give salinity only to the river forcing file or both temperature and salinity?

-Peter
by susonic
Fri Aug 13, 2010 5:18 pm
Forum: ROMS Tools and Techniques
Topic: About linear programing with bathymetry smoothing
Replies: 3
Views: 4131

About linear programing with bathymetry smoothing

Dear users, I was able to see the Dr. Arango's presentation at the latest ROMS workshop. In that ppt file, there is a slide which compares about the bathymetry smoothing methods. And I was wondering whether users can get the linear programing method for the bathymetry smoothing through downloading f...
by susonic
Tue Jul 13, 2010 8:28 am
Forum: ROMS Information
Topic: Question about Sea level
Replies: 5
Views: 7068

Question about Sea level

Dear ROMS Users,

I have a simple question.
Does ROMS calculate sea level variation with respect to the temperature variation?
If it does, would you point out where the code is?

Thanks in advance,

-Peter
by susonic
Mon Jul 05, 2010 7:45 am
Forum: ROMS Information
Topic: question about streamfunction
Replies: 1
Views: 3967

question about streamfunction

Dear Users,
What should I do if I want to write the streamfunction?

Thanks in advance

-Joonho
by susonic
Fri Jul 02, 2010 5:19 am
Forum: ROMS Tools and Techniques
Topic: question about plotting
Replies: 5
Views: 5203

question about plotting

Dear Users, I have some problem with plotting. The ncl was successfully complied but I got an error message when I run the idt gmeta. The error message is, 'reading stdout of translator: Resource temporarily unavailable. Translator aborted' Have you ever seen this message? and if so, what would be t...
by susonic
Sat May 22, 2010 3:00 am
Forum: ROMS Problems
Topic: unrealistic boundary current when modeling internal tide
Replies: 10
Views: 6406

Re: unrealistic boundary current when modeling internal tide

Have you ever tried to run the model without tidal forcing under same condition?
by susonic
Sat May 01, 2010 5:45 am
Forum: ROMS Results
Topic: problem with perfect restart
Replies: 13
Views: 14791

Re: problem with perfect restart

Hi, Kate. Thanks for the reply. My rst file size is only 504mb when it stops. I just came to know that it's concerned with vertical mixing scheme. When I ran the model with LMD and PERFECT_RESTART activated, it couldn't save more than 3 step. However, when I define different vertical mixing scheme(s...
by susonic
Fri Apr 30, 2010 3:43 am
Forum: ROMS Results
Topic: problem with perfect restart
Replies: 13
Views: 14791

problem with perfect restart

Hi all, I found possible bug with perfect restart option in ROMS. without perfect restart option, we can write restart nc file continusouly(say up to 5th or 10th). But with defining perfect restart option, ROMS cannot write more than 3 step in rst nc file. The error message is 'WRT_RST - error while...
by susonic
Mon Apr 26, 2010 1:20 am
Forum: ROMS Problems
Topic: problems with the addition of tide forcing
Replies: 9
Views: 5670

Re: problems with the addition of tide forcing

CHECKDEFS - no bottom stress formulation is selected. See above error message. You need to give the formulation which caculates the bottom stress. In ROMS, we have logarithmic, Linear and Quadratic bottom friction formulation. Those are UV_LOGDRAG, UV_LDRAG and UV_QDAG respectively in cppdefs.h. Yo...
by susonic
Wed Apr 21, 2010 5:15 am
Forum: ROMS Results
Topic: some suggestion with history file and average file
Replies: 7
Views: 10711

Re: some suggestion with history file and average file

Thanks Shchepetkin and Kate, Storing 3D data in restart file can be an alternative solution but it is only a snapshot(not a average). And we don't have split option for the restart file as the history or average file does. So it will store all variables in one file which will give us one huge file. ...
by susonic
Mon Apr 19, 2010 2:03 am
Forum: ROMS Results
Topic: some suggestion with history file and average file
Replies: 7
Views: 10711

Re: some suggestion with history file and average file

Hi Mathieu, Thanks for the reply. Sorry. I might give you a wrong idea. What I want to do is I want to store 2d variable(zeta, ubar,vbar) frequently(say hourly or daily) without 3d variable(temperature, salinity, u, v) on history file. And I want to store 3d vaiable with longer time step(say 10day o...
by susonic
Sun Apr 18, 2010 6:33 am
Forum: ROMS Adjoint
Topic: Question about assimilation
Replies: 1
Views: 3322

Question about assimilation

Dear ROMS users, I was told that ROMS is using a 4DVAR data assimilation scheme which takes 20 times longer than normal calculation. But I think that 3DVAR is also powerful and less cost effective. My question is Are there any plans that making ROMS also be capable of doing 3DVAR data assimilation i...
by susonic
Sun Apr 18, 2010 2:55 am
Forum: ROMS Discussion
Topic: Good fix for issue with Bulk Flux in ROMS
Replies: 8
Views: 6393

Re: Good fix for issue with Bulk Flux in ROMS

Hi Mr.Liu,

Thank you for your reply.

What do I need to do if I want to consider the sea ice effects?

Do you mean that I should turn on the ICESHELF cpp option if I want to consider sea ice effects?

Thanks in advance

-Peter
by susonic
Sat Apr 17, 2010 8:16 am
Forum: ROMS Results
Topic: some suggestion with history file and average file
Replies: 7
Views: 10711

some suggestion with history file and average file

Hi all, So far in ROMS we can store the variables on history file and average file with turning on/off the switches in ocean.in. And both output files are operated by only one switch. I think it would be better if we have each switches on each file(history and average respectively) so that we can st...
by susonic
Sat Apr 17, 2010 7:24 am
Forum: ROMS Discussion
Topic: Good fix for issue with Bulk Flux in ROMS
Replies: 8
Views: 6393

Re: Good fix for issue with Bulk Flux in ROMS

Dear ROMS users, I've got a same problem which Mr.Lanerolle had mentioned above. My domain is including the Okhotsk basin which is cold area and the air temperature goes down below -10 degree celcius in winter(especially on February). And then I got a unphysical sea surface temperature value which i...
by susonic
Thu Dec 31, 2009 10:35 am
Forum: ROMS Discussion
Topic: Q_PSOURE of River discharge?
Replies: 4
Views: 5585

Re: Q_PSOURE of River discharge?

Check it out below address and download the first ppt.

http://www.myroms.org/index.php?page=ROMS_2005_agenda

-Peter
by susonic
Thu Dec 31, 2009 4:00 am
Forum: ROMS Discussion
Topic: Tide open boundry?
Replies: 6
Views: 6273

Re: Tide open boundry?

Hi, yang
please check out below address and download nobuhitomori's pdf file.
There is a boundary code information in that file.

viewtopic.php?f=17&t=930&p=4200#p4200

Hope that it helps to you.

-Peter
by susonic
Thu Dec 31, 2009 3:52 am
Forum: ROMS Discussion
Topic: Q_PSOURE of River discharge?
Replies: 4
Views: 5585

Re: Q_PSOURE of River discharge?

I believe that you'd better use #define UV_PSOURCE #define TS_PSOURCE or #define Q_PSOURCE #define TS_PSOURCE Detailed explanation is given in Warner's presentation in 2005 ROMS workshop. You can get a ppt file at below address. http://www.myroms.org/index.php?page=Workshops Hope it helps to you. -P...
by susonic
Sat Dec 19, 2009 3:33 am
Forum: ROMS Discussion
Topic: Question about srflx
Replies: 6
Views: 4453

Re: Question about srflx

Ah... I should have looked at the code carefully.
Thank you for the advices, prof. Wilkin. :)
by susonic
Fri Dec 18, 2009 5:23 pm
Forum: ROMS Discussion
Topic: Question about srflx
Replies: 6
Views: 4453

Re: Question about srflx

Thank you prof. Wilkin. You're very kind. Here is another question. The explanation which you linked to me is related with lmd mixing and Jerlov water type. Then, what if I want to use the other vertical mixing. Say, GLS vertical mixing scheme. My model result is telling me that different water type...
by susonic
Fri Dec 18, 2009 12:50 pm
Forum: ROMS Discussion
Topic: Question about srflx
Replies: 6
Views: 4453

Re: Question about srflx

Hi, Would you give me more information of the Jerlov water type. The water type 1 is representing the clearest water and 5 corresponding to the shortest penetration of solar radiation. This is all I know. Am I understanding right? Then, what is the criteria determining the water type? Any informatio...
by susonic
Thu Dec 17, 2009 4:21 am
Forum: ROMS Problems
Topic: model blow up
Replies: 16
Views: 9084

Re: model blow up

First of all, I doubt the cpp option. In cpp they are warning try not to use 'TS_SADVECTION' unless it's a shallow and high vertical resolution application. If it's not a solution, then what about changing the ROMS version? Say, go back to svn 390.
by susonic
Tue Nov 24, 2009 1:10 am
Forum: ROMS Results
Topic: diagnostic variable
Replies: 1
Views: 4085

diagnostic variable

Hi everyone,

It sounds basic stuff, but I was wondering which variable should I
use if I want to plot surface elevation gradient force and
baroclinic pressure gradient force term in the diagnostic file?

Thanks in advance

-Peter
by susonic
Tue Nov 17, 2009 4:31 am
Forum: ROMS Discussion
Topic: Final set of model constants for the GLS turbulence closures
Replies: 4
Views: 3801

Re: Final set of model constants for the GLS turbulence closures

Thanks for your quik reply, Dr. Warner. In your previous article which is right above my question, you mentioned this but i recommend to use the values in the ocean*.in files. and you just wrote that From the paper, the gls_cmuo value should be 0.5544 when used with the KC stability function for any...
by susonic
Tue Nov 17, 2009 1:33 am
Forum: ROMS Discussion
Topic: Final set of model constants for the GLS turbulence closures
Replies: 4
Views: 3801

Re: Final set of model constants for the GLS turbulence closures

Hi Dr. Warner, I've got some questions about various GLS vertical mixing schemes. According to Warner et al(2005) on table no.2, 1. if I use k-epsilon with the Kantha and Clayson stability function, is nessasary to change the GLS_CMU0 value from 0.5477(ocean.in) to 0.5544(from the paper)? 2. What ab...
by susonic
Wed Sep 30, 2009 5:28 pm
Forum: ROMS Installation
Topic: Point source definitions
Replies: 13
Views: 12712

Re: Point source definitions

It took a while for me to fix the high/low temperature with point source erorr. Now, I think I don't get the weird value anymore. The solution is turn on both the temperature and salinity flag. I had been doing all the experiments with only salinity value defined because I didn't know the temperatur...
by susonic
Tue Sep 29, 2009 3:07 am
Forum: ROMS Discussion
Topic: Passive tracer in river forcing
Replies: 2
Views: 2283

Passive tracer in river forcing

Dear ROMS users, I'm driving a regional model with a river source included. I want to use a passive tracer in order to visualize more about the distribution of the river plume. At first, I was able to add passive tracer in my initail and also boundary condition file. The model ran well and the resul...
by susonic
Wed Sep 23, 2009 4:51 am
Forum: ROMS Usage
Topic: Vertical mixing scheme in ROMS
Replies: 4
Views: 6514

Re: Vertical mixing scheme in ROMS

Hi ggerbi,

Thank you for your suggestion.
I'm running the model with time reduced(one third of the original time step). And now
it's woring without any problem.
It has still a little bit unstable speed near the boundary, though.

Again, thank you so much for your advice.

Best,

-Peter
by susonic
Tue Sep 22, 2009 6:10 am
Forum: ROMS Usage
Topic: Vertical mixing scheme in ROMS
Replies: 4
Views: 6514

Re: Vertical mixing scheme in ROMS

Hi Dr.Warner, I already tested my application with using LMD and MY 2.5 vertical scheme. It ran well without any problem. And I have just tested k-omega and gen vertical mixing and it also ran well without any problem. For the k-epsilon, my final history file gives me that there is an increasing spe...
by susonic
Mon Sep 21, 2009 9:39 pm
Forum: ROMS Discussion
Topic: Access to additional scalar variables.
Replies: 4
Views: 4027

Re: Access to additional scalar variables.

Dear all,

I wanted to try to use the passive tracer in river forcing as mentioned above.
Would anyone help me out and give specific informations to me about
'add passive tracer in river forcing' ?
Thanks in advance,

-Peter
by susonic
Mon Sep 21, 2009 9:35 pm
Forum: ROMS Usage
Topic: Vertical mixing scheme in ROMS
Replies: 4
Views: 6514

Vertical mixing scheme in ROMS

Hi, I'm trying to use GLS vertical mixing with k-epsilon. First of all, I ran under Kantha clayson with k-epsilon. It ran until 9th model day and blew up. Then I changed stability function to CANUTO_A. The model ran until 20th model day. I also changed the viscosity value. But it didn't help me out ...
by susonic
Fri Sep 18, 2009 1:18 am
Forum: ROMS Discussion
Topic: Access to additional scalar variables.
Replies: 4
Views: 4027

Re: Access to additional scalar variables.

Hi Dr.Wilkins, I wanted to try to use the passive tracer. And I was able to add dye_01 in my initail condition and also boundary condition file. The model was run well. Now I want to run with passive tracer in my river forcing file. I have been searching out the answer for this question in ROMS foru...
by susonic
Sun Jul 26, 2009 2:35 am
Forum: ROMS Usage
Topic: Open Boundary Problem
Replies: 20
Views: 14553

Re: Open Boundary Problem

How often is your BC value given in your domain?
Have you ever changed the BC code from RADIATION to CLAMPED for M3 and T ?
From my experience, CLAMPED BC code might be more promising.

-Peter
by susonic
Tue Jun 16, 2009 1:56 am
Forum: ROMS Installation
Topic: Question about the PASCAL compiler
Replies: 5
Views: 4287

Re: Question about the PASCAL compiler

Thank you for the answer, Schepet. That's valuable information for me.
And thank you, Gcreager. That's another important information. I'm going to try that one.
I really hope that this new opteron would get better.

Best,

-Peter
by susonic
Thu Jun 11, 2009 9:10 am
Forum: ROMS Installation
Topic: Question about the PASCAL compiler
Replies: 5
Views: 4287

Re: Question about the PASCAL compiler

Thank you for the reply. I was able to find an information about PASCAL.
Yes like you said, it is not a fortran compiler.
Is there a way to improve the performance with this AMD based cpu?

Any suggestion would be appreciated.

Best,

-Peter
by susonic
Tue Jun 09, 2009 8:54 am
Forum: ROMS Installation
Topic: Question about the PASCAL compiler
Replies: 5
Views: 4287

Question about the PASCAL compiler

Hi all, Recently I had bought a new system which is based on AMD cpu. And I was wondering how fast it is. I had run under same condition such as same OS(SUSE 10.3), PGI compiler, same NETCDF version, same MPI, same SVN ROMS. But the new version of system did not show good performance. Therefore I ha...
by susonic
Sat Apr 18, 2009 3:42 am
Forum: ROMS Bugs
Topic: Very slight bug in inp_par.F
Replies: 2
Views: 2755

Re: Very slight bug in inp_par.F

Hi, all
In set_data.F line 729, unnecessary parenthesis is included.
Check that one out please.

-Peter
by susonic
Wed Apr 15, 2009 1:25 am
Forum: ROMS Problems
Topic: Forcing in ROMS3.0
Replies: 4
Views: 4615

Re: Forcing in ROMS3.0

It seems that the error is about the same error which I experienced a couple of months ago with
eariler svn in ROMS 3.x.
Did you update with current svn ?
Try to check out current ROMS svn.
Maybe the number with current svn is 347.
by susonic
Tue Apr 07, 2009 11:11 am
Forum: ROMS Installation
Topic: Point source definitions
Replies: 13
Views: 12712

Re: Point source definitions

Thank you Kate and Warner. I'm running the model again under temperature "TRUE" and staion with river point. I'm also testing with same discharge but more river point source. We'll see what happens. I'll report the result soon. I took a few snapshot and attached. I just hope that this is w...
by susonic
Tue Apr 07, 2009 10:20 am
Forum: ROMS Installation
Topic: require netcdf for 64-bit platform!
Replies: 7
Views: 7350

Re: require netcdf for 64-bit platform!

Thank you for your reply, crode and kate.
I'm going to try it again based on your information and will report the result here.

Best,

-Peter
by susonic
Mon Apr 06, 2009 6:50 pm
Forum: ROMS Installation
Topic: Point source definitions
Replies: 13
Views: 12712

Re: Point source definitions

where are these points on the grid and which way is 'xi'? My domain is rotated so the xi direction would be rotated anticlockwise 40 degree from its original direction. And also if you see the above figure, named river_point, you can see the three blue points. Those are river flux points. Did you t...
by susonic
Mon Apr 06, 2009 5:59 pm
Forum: ROMS Installation
Topic: Point source definitions
Replies: 13
Views: 12712

Re: Point source definitions

What is the text on that line, and what is wrong? Well, it's not a big deal. I underlined the character in figure(see below). Even though I'm using a mpdata, I'm still getting weird value. This time, it has both hot water and cold water at the same time. Actually, I had run my model several time wi...
by susonic
Mon Apr 06, 2009 2:16 pm
Forum: ROMS Installation
Topic: Point source definitions
Replies: 13
Views: 12712

Re: Point source definitions

Hi warner,

Thank you for your reply. I'm using default uv_advection scheme and u3h c4v for TS.
I attached again with png format.(sorrry and thanks)
I'm going to use the mpdata and will report the result here.

FYI, it has wrong spell in mpdata_diff.F on 19th line.

Regards,
by susonic
Sun Apr 05, 2009 7:40 am
Forum: ROMS Installation
Topic: Point source definitions
Replies: 13
Views: 12712

Re: Point source definitions

Hi, all I'm trying to represent the river plume model which has a large discharge with uv_psource & ana_psource defined on cpp flag. The discharge varies 10000 upto 60000 ms-1. The size of delta x is approximately 11 km. At first, when I put the tidal forcing together with river, every thing was...
by susonic
Sat Apr 04, 2009 5:46 am
Forum: ROMS Installation
Topic: require netcdf for 64-bit platform!
Replies: 7
Views: 7350

Re: require netcdf for 64-bit platform!

Dera user,

I'm trying to install ROMS in NEC-SX system.
Is there a person who uses this system?
If so, would you show me a complie sctipt(sxf90 compiler)?

Please help me out.
Thanks in advance,

-Peter,
by susonic
Thu Mar 12, 2009 10:34 am
Forum: ROMS Discussion
Topic: Question about the tidal forcing
Replies: 3
Views: 3037

Question about the tidal forcing

Hi all, While I was trying to add tidal forcing, I came to see that the ROMS is using both surface hieght and depth-averaged velocity boundary conditions in tidal forcing. I think that using both the height and velocity boundary conditions might lead into trouble due to the inconsistence between the...
by susonic
Mon Jan 19, 2009 3:20 am
Forum: ROMS Usage
Topic: prognostic & diagnostic
Replies: 3
Views: 5746

Re: prognostic & diagnostic

Hi, Mr.Arango. First of all, happy new year(sorry, it's kind of late greeting) Thank you so much for your clear explanation. It's a really specific information and also thank you for the link :D . It helped me out to understand better about those two method. Actually, I've been researching with thos...
by susonic
Sun Jan 18, 2009 8:35 am
Forum: ROMS Usage
Topic: prognostic & diagnostic
Replies: 3
Views: 5746

Re: prognostic & diagnostic

As far as I know in ROMS, if you want to do a prognostic running you need to run the model with undef xx_CLIMATOLOGY in contrast, if you want do a diagnostic running you need to run the model with define xx_CLIMATOLOGY in your header file. Am I right? Is there anyone who can tell me so that I can fi...
by susonic
Sat Jan 10, 2009 6:35 am
Forum: ROMS Usage
Topic: prognostic & diagnostic
Replies: 3
Views: 5746

prognostic & diagnostic

Hi all It might sound basic thing but I can't find a definition of prognostic run and diagnostic run. Is there anyone who can define those two methods and explain what should I do if I want to run by those two separate methods with ROMS? For example, turn on specific cpp flag. Thank you so much! Best
by susonic
Mon Jan 05, 2009 8:09 am
Forum: ROMS Tools and Techniques
Topic: Matlab version errors on ROMSTOOLS
Replies: 6
Views: 4803

Re: Matlab version errors on ROMSTOOLS

The first one is visualization tools and the second one is for both visualization and preprocessing
tools http://eros.eas.gatech.edu/RNT/ here is the direct address.

Best,
by susonic
Mon Jan 05, 2009 2:50 am
Forum: ROMS Tools and Techniques
Topic: Matlab version errors on ROMSTOOLS
Replies: 6
Views: 4803

Re: Matlab version errors on ROMSTOOLS

viewtopic.php?t=916
viewtopic.php?t=1059
These two forums are helpful for you.

Regards,
by susonic
Sun Jan 04, 2009 5:03 am
Forum: ROMS Tools and Techniques
Topic: Matlab version errors on ROMSTOOLS
Replies: 6
Views: 4803

Re: Matlab version errors on ROMSTOOLS

Hi, there.
The tools which you are trying to use is from a different version of ROMS.
It's ROMS_Agrif from brest(France).
You'd better ask those questions
on http://roms.mpl.ird.fr/ which you downloaded the tools.

Good luck!
by susonic
Tue Nov 11, 2008 8:04 am
Forum: ROMS Problems
Topic: smflux using analytical expression
Replies: 15
Views: 9658

Re: smflux using analytical expression

Hi all. First of all, thanks to Arango's advice, finally I made a forcing file for representing certain typhoon with using Netcdf file. Well, I was poor at programming. But I'm sure that I learnt a lot throughout this opportunity. Anyways, I put wind stress and pressure as a forcing for typhoon. It ...
by susonic
Fri Oct 10, 2008 3:48 am
Forum: ROMS Discussion
Topic: Tidal effection with analytical expression
Replies: 3
Views: 2654

Re: Tidal effection with analytical expression

Thank you so much for your reply, Mr.Wilkin and Mr.Johnluick. And yes I will try to make a netcdf file to force the tide. Before that I wanted to use the analytical method(I drove just one boundary-thanks to Johnluick) and it works! Now I will try to make a netcdf file. And I have a question. How ca...
by susonic
Tue Oct 07, 2008 4:53 pm
Forum: ROMS Discussion
Topic: Tidal effection with analytical expression
Replies: 3
Views: 2654

Tidal effection with analytical expression

Hi all, I want to use tidal effect using analytical expression in my domain. Since my domain is too small to use large scale data such as TPXO6. So, I think it's better to use the ana_fsobc.h to make tadal effect. Hence I put this m2=0.757_r8 s2=0.337_r8 k1=0.245_r8 o1=0.177_r8 ttime=time(ng)+162.0_...
by susonic
Wed Oct 01, 2008 7:43 pm
Forum: ROMS Problems
Topic: smflux using analytical expression
Replies: 15
Views: 9658

Re: smflux using analytical expression

Hi arango, I'm still analyzing Netcdf file to make a forcing file for typhoon. :cry: But I think I can make the forcing file soon. :roll: Right now I'm trying to simulate the effect of typhoon in the ocean such as 'cold wake'. Would you let me know what I need to define in my cppflag ? The problem i...
by susonic
Wed Oct 01, 2008 7:21 pm
Forum: ROMS Discussion
Topic: Inert Passive Tracer
Replies: 4
Views: 4810

Re: Inert Passive Tracer

Thank you Kate. That's very nice of you to upload here so that anyone who
is wondering about the function can downdload and use it.
Well I need to analyze the script which you uploaded and I will apply in my case.
Thanks again. Have a great day!

Regards,
-Peter
by susonic
Tue Sep 30, 2008 5:05 pm
Forum: ROMS Problems
Topic: Meaning of 'BOUNDARY(ng)%'
Replies: 4
Views: 3419

Re: Meaning of 'BOUNDARY(ng)%'

Hi Kate,
I've got one more question to make sure I understood right or not.
So, does 'ng' mean each grid?

Best,
-Peter
by susonic
Tue Sep 30, 2008 4:46 pm
Forum: ROMS Problems
Topic: smflux using analytical expression
Replies: 15
Views: 9658

Re: smflux using analytical expression

Hi Arango.
Thank you so much for your early reply. And I'm sorry for the lack of understanding
and also made you surprise. :cry:
I'll take your tips and promise that I'll try to study more about ROMS. :)

Regards,
-Peter
by susonic
Tue Sep 30, 2008 9:20 am
Forum: ROMS Problems
Topic: smflux using analytical expression
Replies: 15
Views: 9658

smflux using analytical expression

Hi all, I'm trying to force both wind and pressure by using an analytical expression. It works but I got a weird value in my output file. So, is there anyone who can check out what the problem is? I put like this # elif defined NWPACIFIC OPEN(103,file='pres001.p',status='old') DO j=JstrR,JendR read(...
by susonic
Tue Sep 30, 2008 9:08 am
Forum: ROMS Discussion
Topic: Inert Passive Tracer
Replies: 4
Views: 4810

Re: Inert Passive Tracer

Hi Kate. Thank you so much for your information. It really helps me to understand more about passive tracer. Would you mind if I request your file which has passive_tracer or matlab xxx.m file which is used for making passive boundary or initial file? Or your ana_passive.h file would be also great t...
by susonic
Mon Sep 29, 2008 4:16 am
Forum: ROMS Discussion
Topic: Inert Passive Tracer
Replies: 4
Views: 4810

Inert Passive Tracer

Hi all I'm trying to use inert passive tracer by ANA_PASSIVE. But I don't know for sure how to use it. Is there anyone who can give me an example file of ANA_PASSIVE so that I can reference it in my case. Right now I'm going to use those tracers as a diffusion of oil spill. ! Logical switches (TRUE/...
by susonic
Fri Sep 26, 2008 2:07 pm
Forum: ROMS Problems
Topic: Meaning of 'BOUNDARY(ng)%'
Replies: 4
Views: 3419

Re: Meaning of 'BOUNDARY(ng)%'

Thank you Kate. I really appreciate your reply.
Have a good weekend. :D
by susonic
Tue Sep 23, 2008 2:34 pm
Forum: ROMS Problems
Topic: Meaning of 'BOUNDARY(ng)%'
Replies: 4
Views: 3419

Meaning of 'BOUNDARY(ng)%'

Hi all
I've been wondering that what does 'BOUNDARY(ng)%' mean?
Would you let me know that each of 'BOUNDARY' '(ng)' '%' meaning?
BOUNDARY(ng)%ubar_west(j)=my_flux/my_area
BOUNDARY(ng)%vbar_west(j)=0.0_r8
I appreciate any of your lessons.

Best,
-Peter
by susonic
Mon Jun 09, 2008 10:46 am
Forum: ROMS Information
Topic: compile in fedora 8 with intel fortran
Replies: 2
Views: 3758

Hi! linzhenhua Thank you for the reply. I just solved the error a few minutes ago. :lol: It was the exact right error which you mentioned. I was so naive about Linux system therefore I didn't know which netcdf I should download. (I just downloaded netcdf-3.6.2_linux64.tar.gz) And I got a wrong one. ...
by susonic
Sun Jun 08, 2008 3:02 am
Forum: ROMS Information
Topic: compile in fedora 8 with intel fortran
Replies: 2
Views: 3758

compile in fedora 8 with intel fortran

Hi~ I've just installed Linux fedora8 and set up Intel Fortran 10.1.015_x86_64 together with netcdf 3.6.2_x96_64 I also set up roms-3.0 However whenever I try to compile I got below message. What seems to be the problem? What else I should install more about Linux system. I don't know much about Lin...
by susonic
Fri Feb 29, 2008 1:50 am
Forum: ROMS Installation
Topic: How can I get ROMS 3.0
Replies: 2
Views: 2968

Thanks !

Thank you for your quik answer. I really appreciate that cecilia.
And I'll try~ Have a good day.
by susonic
Thu Feb 28, 2008 6:57 am
Forum: ROMS Installation
Topic: How can I get ROMS 3.0
Replies: 2
Views: 2968

How can I get ROMS 3.0

Hi everyone !
I've been trying to find out how to download ROMS 3.0 but I couldn't
have done yet. So, could you explain how/where to download ROMS 3.0 please?
And I don't know much about ROMS 3.0 so I'm wondering wheather I should pay for downloading ROMS 3.0 or not.

Thanks in advance

-Peter
by susonic
Tue Dec 11, 2007 9:11 am
Forum: ROMS Source
Topic: About tracers...
Replies: 1
Views: 4546

About tracers...

Hi all I'd like to ask three questions. First, we can input river plume with salinity of zero in the model. I'm wondering if it is possible to dicribe the nutrient density of the river plume to see the influence of the river plume. Second, is there a way to calculate the diffusion of spilled oil ove...
by susonic
Fri Nov 30, 2007 7:29 am
Forum: ROMS Usage
Topic: Tidal Effect
Replies: 4
Views: 4106

Great!

What a detail answer! Thanks for a Gooooooood explanation.

I'll apply the shorter time step and let you know how it goes.

Thanks again! And have a GOOD day~
by susonic
Thu Nov 29, 2007 2:40 am
Forum: ROMS Usage
Topic: Tidal Effect
Replies: 4
Views: 4106

Yes, It stopped while calculating a time step.Thanks Kate~ And I'll try to reduce the time step~ By the way, I am just wondering why should I change the time step? Is the time step change concerned with blow up ? I think the time step is just the time step. I don't understand.... Would you mind expl...
by susonic
Sat Nov 24, 2007 2:45 am
Forum: ROMS Usage
Topic: Tidal Effect
Replies: 4
Views: 4106

Tidal Effect

Hi~ I'm using ROMS2.1 and I've got some problem when I put tidal effect. My case is North Pacific case(North-west Pacific region) and my cppdefs option is #define UV_ADV #define UV_COR #define UV_VIS2 #undef UV_VIS4 #define TS_DIF2 #undef TS_DIF4 #define MIX_GEO_TS #undef MIX_GEO_UV #define MIX_S_UV...
by susonic
Sat Nov 24, 2007 1:56 am
Forum: ROMS Problems
Topic: Some problems
Replies: 2
Views: 2821

Thx for the reply

I really appreciate your answer! Kate~
by susonic
Sun Nov 18, 2007 2:39 pm
Forum: ROMS Problems
Topic: Some problems
Replies: 2
Views: 2821

Some problems

Hi All~I'm using ROMS 2.1 and I'm goning to ask 3 questions. the 1st question is I'm trying to make new grid file, but the bathymetry is different with each rtarget value. Is there an appropriate rtarget value when I'm making the grid? the 2nd one is when I'm making a grid for a very zoomed area(som...
by susonic
Fri Nov 02, 2007 5:27 am
Forum: ROMS Usage
Topic: About topography
Replies: 4
Views: 3821

Thanks for your detailed reply. I really appreciate it ! :o
by susonic
Thu Nov 01, 2007 12:02 pm
Forum: ROMS Usage
Topic: About topography
Replies: 4
Views: 3821

Thank you for your answer

ETOPO5 is 5minite grid... Then what does 5 minute grid mean?
(It might be a basic question but I don't know... :? )
And is ETOPO2 a confirmed data? Does it reliable?
And the last but most important question, I'm using ROMS2.1, so can you tell me where the menual is?

Many thanks... Kate! :P
by susonic
Tue Oct 30, 2007 4:09 pm
Forum: ROMS Usage
Topic: About topography
Replies: 4
Views: 3821

About topography

Hi Everyone! I'm a begginer with ROMS. And I wanna know about the topography which is used when we make grid. My friend said to me that use etopo5. He just said "You have to use etopo5 becasuse etopo5 has better depth data than etopo2" Are there any special difference between etopo2 and et...