# svn $Id: Linux-gfortran.mk 1054 2021-03-06 19:47:12Z arango $ #:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: # Copyright (c) 2002-2021 The ROMS/TOMS Group ::: # Licensed under a MIT/X style license ::: # See License_ROMS.txt ::: #:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: # # Include file for GNU Fortran compiler on Linux # ------------------------------------------------------------------------- # # ARPACK_LIBDIR ARPACK libary directory # FC Name of the fortran compiler to use # FFLAGS Flags to the fortran compiler # CPP Name of the C-preprocessor # CPPFLAGS Flags to the C-preprocessor # HDF5_INCDIR HDF5 include directory # HDF5_LIBDIR HDF5 library directory # HDF5_LIBS HDF5 library switches # LIBS Required libraries during linking # NF_CONFIG NetCDF Fortran configuration script # NETCDF_INCDIR NetCDF include directory # NETCDF_LIBDIR NetCDF library directory # NETCDF_LIBS NetCDF library switches # LD Program to load the objects into an executable # LDFLAGS Flags to the loader # RANLIB Name of ranlib command # MDEPFLAGS Flags for sfmakedepend (-s if you keep .f files) # # First the defaults # FC := gfortran FFLAGS := -frepack-arrays FIXEDFLAGS := -ffixed-form FREEFLAGS := -ffree-form -ffree-line-length-none CPP := /usr/bin/cpp CPPFLAGS := -P -traditional -w # -w turns of warnings INCDIR := /usr/include /usr/local/bin SLIBS := -L/usr/local/lib -L/usr/lib -L/usr/lib64 ULIBS := LIBS := $(SCRATCH_DIR)/libNLM.a # cyclic dependencies MOD_SUFFIX := mod LD := $(FC) LDFLAGS := AR := ar ARFLAGS := -r MKDIR := mkdir -p CP := cp -p -v RM := rm -f RANLIB := ranlib PERL := perl TEST := test #-------------------------------------------------------------------------- # Compiling flags for ROMS Applications. #-------------------------------------------------------------------------- ifdef USE_ROMS ifdef USE_DEBUG FFLAGS += -g -O0 FFLAGS += -fbounds-check FFLAGS += -fbacktrace FFLAGS += -fcheck=all FFLAGS += -fsanitize=address -fsanitize=undefined FFLAGS += -finit-real=nan -ffpe-trap=invalid,zero,overflow else FFLAGS += -O3 FFLAGS += -ffast-math endif MDEPFLAGS := --cpp --fext=f90 --file=- --objdir=$(SCRATCH_DIR) endif #-------------------------------------------------------------------------- # Compiling flags for CICE Applications. #-------------------------------------------------------------------------- ifdef CICE_APPLICATION CPPDEFS := -DLINUS $(MY_CPP_FLAGS) ifdef USE_DEBUG FFLAGS += -g FFLAGS += -fbounds-check # FFLAGS += -fcheck=all FFLAGS += -fsanitize=address -fsanitize=undefined else FFLAGS := -O3 -w endif endif #-------------------------------------------------------------------------- # Coupled models. Notice Linux needs the libraries repeated for # dependencies for some of the coupled components. #-------------------------------------------------------------------------- ifdef USE_COAMPS LIBS += $(COAMPS_LIB_DIR)/coamps_driver.a LIBS += $(COAMPS_LIB_DIR)/libaa.a LIBS += $(COAMPS_LIB_DIR)/libam.a LIBS += $(COAMPS_LIB_DIR)/libashare.a LIBS += $(COAMPS_LIB_DIR)/libcoamps.a LIBS += $(COAMPS_LIB_DIR)/libfnoc.a LIBS += $(COAMPS_LIB_DIR)/libaa.a LIBS += $(COAMPS_LIB_DIR)/libam.a LIBS += $(COAMPS_LIB_DIR)/libashare.a LIBS += $(COAMPS_LIB_DIR)/libcoamps.a LIBS += $(COAMPS_LIB_DIR)/libfnoc.a LIBS += $(COAMPS_LIB_DIR)/libfishpak.a LIBS += $(COAMPS_LIB_DIR)/libtracer.a endif ifdef CICE_APPLICATION SLIBS += $(SLIBS) $(LIBS) endif ifdef USE_WRF ifeq "$(strip $(WRF_LIB_DIR))" "$(WRF_SRC_DIR)" LIBS += $(WRF_LIB_DIR)/main/module_wrf_top.o LIBS += $(WRF_LIB_DIR)/main/libwrflib.a LIBS += $(WRF_LIB_DIR)/external/fftpack/fftpack5/libfftpack.a LIBS += $(WRF_LIB_DIR)/external/io_grib1/libio_grib1.a LIBS += $(WRF_LIB_DIR)/external/io_grib_share/libio_grib_share.a LIBS += $(WRF_LIB_DIR)/external/io_int/libwrfio_int.a LIBS += $(WRF_LIB_DIR)/external/esmf_time_f90/libmyesmf_time.a LIBS += $(WRF_LIB_DIR)/external/RSL_LITE/librsl_lite.a LIBS += $(WRF_LIB_DIR)/frame/module_internal_header_util.o LIBS += $(WRF_LIB_DIR)/frame/pack_utils.o LIBS += $(WRF_LIB_DIR)/external/io_netcdf/libwrfio_nf.a WRF_MOD_DIRS = main frame phys share external/esmf_time_f90 else LIBS += $(WRF_LIB_DIR)/module_wrf_top.o LIBS += $(WRF_LIB_DIR)/libwrflib.a LIBS += $(WRF_LIB_DIR)/libfftpack.a LIBS += $(WRF_LIB_DIR)/libio_grib1.a LIBS += $(WRF_LIB_DIR)/libio_grib_share.a LIBS += $(WRF_LIB_DIR)/libwrfio_int.a LIBS += $(WRF_LIB_DIR)/libmyesmf_time.a LIBS += $(WRF_LIB_DIR)/librsl_lite.a LIBS += $(WRF_LIB_DIR)/module_internal_header_util.o LIBS += $(WRF_LIB_DIR)/pack_utils.o LIBS += $(WRF_LIB_DIR)/libwrfio_nf.a endif endif #-------------------------------------------------------------------------- # Library locations, can be overridden by environment variables. #-------------------------------------------------------------------------- LDFLAGS := $(FFLAGS) ifdef USE_NETCDF4 # NF_CONFIG ?= nc-config !after 4.1.3 nf-config # NETCDF_INCDIR ?= $(shell $(NF_CONFIG) --prefix)/include # LIBS += $(shell $(NF_CONFIG) --flibs) # INCDIR += $(NETCDF_INCDIR) $(INCDIR) NETCDF_INCDIR ?= /research/home/wuting/software/netcdf-4.1.3/netcdf/include NETCDF_LIBDIR ?= /research/home/wuting/software/netcdf-4.1.3/netcdf/lib LIBS := -L$(NETCDF_LIBDIR) -lnetcdff else NETCDF_INCDIR ?= /opt/gfortransoft/serial/netcdf3/include NETCDF_LIBDIR ?= /opt/gfortransoft/serial/netcdf3/lib NETCDF_LIBS ?= -lnetcdf LIBS += -L$(NETCDF_LIBDIR) $(NETCDF_LIBS) INCDIR += $(NETCDF_INCDIR) $(INCDIR) endif ifdef USE_HDF5 # HDF5_INCDIR ?= /opt/gfortransoft/serial/hdf5/include # HDF5_LIBDIR ?= /opt/gfortransoft/serial/hdf5/lib HDF5_INCDIR ?= $(HDF5_INC) HDF5_LIBDIR ?= $(HDF5_LIBDIR) HDF5_LIBS ?= -lhdf5_fortran -lhdf5hl_fortran -lhdf5 -lz LIBS += -L$(HDF5_LIBDIR) $(HDF5_LIBS) INCDIR += $(HDF5_INCDIR) endif NETCDF_INCDIR ?= /research/home/wuting/software/netcdf-4.1.3/netcdf/include NETCDF_LIBDIR ?= /research/home/wuting/software/netcdf-4.1.3/netcdf/lib LIBS := -L$(NETCDF_LIBDIR) -lnetcdff ifdef USE_ARPACK ifdef USE_MPI # PARPACK_LIBDIR ?= /opt/gfortransoft/PARPACK PARPACK_LIBDIR ?= /research/home/wuting/software/ROMSsrc/Lib/ARPACK # LIBS += -L$(PARPACK_LIBDIR) -lparpack LIBS += $(PARPACK_LIBDIR)/libparpack.a endif # ARPACK_LIBDIR ?= /opt/gfortransoft/ARPACK ARPACK_LIBDIR ?= /research/home/wuting/software/ROMSsrc/Lib/ARPACK # LIBS += -L$(ARPACK_LIBDIR) -larpack LIBS += $(ARPACK_LIBDIR)/libarpack.a endif ifdef USE_MPI CPPFLAGS += -DMPI ifdef USE_MPIF90 FC := mpif90 else LIBS += -lfmpi -lmpi endif endif ifdef USE_OpenMP CPPFLAGS += -D_OPENMP FFLAGS += -fopenmp -static-libgcc # LIBS += -lgomp endif ifdef USE_MCT MCT_INCDIR ?= /usr/local/mct/include MCT_LIBDIR ?= /usr/local/mct/lib FFLAGS += -I$(MCT_INCDIR) LIBS += -L$(MCT_LIBDIR) -lmct -lmpeu INCDIR += $(MCT_INCDIR) $(INCDIR) endif ifdef USE_ESMF ESMF_OS ?= $(OS) ESMF_SUBDIR := $(ESMF_OS).$(ESMF_COMPILER).$(ESMF_ABI).$(ESMF_COMM).$(ESMF_SITE) ESMF_MK_DIR ?= $(ESMF_DIR)/lib/lib$(ESMF_BOPT)/$(ESMF_SUBDIR) include $(ESMF_MK_DIR)/esmf.mk FFLAGS += $(ESMF_F90COMPILEPATHS) LIBS += $(ESMF_F90LINKPATHS) $(ESMF_F90ESMFLINKLIBS) endif # Use full path of compiler. FC := $(shell which ${FC}) LD := $(FC) #-------------------------------------------------------------------------- # ROMS specific rules. #-------------------------------------------------------------------------- # Turn off bounds checking for function def_var, as "dimension(*)" # declarations confuse Gnu Fortran 95 bounds-checking code. ifdef USE_ROMS $(SCRATCH_DIR)/def_var.o: FFLAGS += -fno-bounds-check endif # Allow integer overflow in ran_state.F. This is not allowed # during -O3 optimization. This option should be applied only for # Gfortran versions >= 4.2. ifdef USE_ROMS FC_TEST := $(findstring $(shell ${FC} --version | head -1 | \ awk '{ sub("Fortran 95", "Fortran"); print }' | \ cut -d " " -f 4 | \ cut -d "." -f 1-2), \ 4.0 4.1) ifeq "${FC_TEST}" "" $(SCRATCH_DIR)/ran_state.o: FFLAGS += -fno-strict-overflow endif endif # Set free form format in some ROMS source files to allow long string for # local directory and compilation flags inside the code. ifdef USE_ROMS $(SCRATCH_DIR)/mod_ncparam.o: FFLAGS += $(FREEFLAGS) $(SCRATCH_DIR)/mod_strings.o: FFLAGS += $(FREEFLAGS) $(SCRATCH_DIR)/analytical.o: FFLAGS += $(FREEFLAGS) $(SCRATCH_DIR)/biology.o: FFLAGS += $(FREEFLAGS) ifdef USE_ADJOINT $(SCRATCH_DIR)/ad_biology.o: FFLAGS += $(FREEFLAGS) endif ifdef USE_REPRESENTER $(SCRATCH_DIR)/rp_biology.o: FFLAGS += $(FREEFLAGS) endif ifdef USE_TANGENT $(SCRATCH_DIR)/tl_biology.o: FFLAGS += $(FREEFLAGS) endif endif #-------------------------------------------------------------------------- # Model coupling specific rules. #-------------------------------------------------------------------------- # Add COAMPS library directory to include path of ESMF coupling files. ifdef USE_COAMPS $(SCRATCH_DIR)/esmf_atm.o: FFLAGS += -I$(COAMPS_LIB_DIR) $(SCRATCH_DIR)/esmf_esm.o: FFLAGS += -I$(COAMPS_LIB_DIR) endif # Add WRF library directory to include path of ESMF coupling files. ifdef USE_WRF ifeq "$(strip $(WRF_LIB_DIR))" "$(WRF_SRC_DIR)" $(SCRATCH_DIR)/esmf_atm.o: FFLAGS += $(addprefix -I$(WRF_LIB_DIR)/,$(WRF_MOD_DIRS)) else $(SCRATCH_DIR)/esmf_atm.o: FFLAGS += -I$(WRF_LIB_DIR) endif endif # Supress free format in SWAN source files since there are comments # beyond column 72. ifdef USE_SWAN $(SCRATCH_DIR)/ocpcre.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/ocpids.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/ocpmix.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swancom1.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swancom2.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swancom3.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swancom4.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swancom5.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swanmain.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swanout1.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swanout2.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swanparll.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swanpre1.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swanpre2.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swanser.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swmod1.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/swmod2.o: FFLAGS += $(FIXEDFLAGS) $(SCRATCH_DIR)/m_constants.o: FFLAGS += $(FREEFLAGS) $(SCRATCH_DIR)/m_fileio.o: FFLAGS += $(FREEFLAGS) $(SCRATCH_DIR)/mod_xnl4v5.o: FFLAGS += $(FREEFLAGS) $(SCRATCH_DIR)/serv_xnl4v5.o: FFLAGS += $(FREEFLAGS) endif