! ! ROMS/TOMS IO NetCDF variables. ! !svn $Id: varinfo.dat 948 2019-02-07 03:33:28Z arango $ !========================================================= Hernan G. Arango === ! Copyright (c) 2002-2019 The ROMS/TOMS Group ! ! Licensed under a MIT/X style license ! ! See License_ROMS.txt ! !============================================================================== ! ! ! This file contains all ROMS/TOMS Input/Output variables information. It ! ! is used to manage NetCDF files. The following information is needed for ! ! any IO variable: ! ! ! ! Vinfo(1) Field variable name. ! ! Vinfo(2) Long-name attribute. ! ! Vinfo(3) Units attribute. ! ! Vinfo(4) Field type attribute. ! ! Vinfo(5) Associated time variable name. ! ! Vinfo(6) Index variable name used in information arrays. ! ! Vinfo(7) Staggered C-grid variable type: ! ! 'nulvar' => non-grided variable. ! ! 'p2dvar' => 2D PHI-variable. ! ! 'r2dvar' => 2D RHO-variable. ! ! 'u2dvar' => 2D U-variable. ! ! 'v2dvar' => 2D V-variable. ! ! 'p3dvar' => 3D PHI-variable. ! ! 'r3dvar' => 3D RHO-variable. ! ! 'u3dvar' => 3D U-variable. ! ! 'v3dvar' => 3D V-variable. ! ! 'w3dvar' => 3D W-variable. ! ! 'b3dvar' => 3D BED-sediment. ! ! scale Scale to convert input data to model units. ! ! ! ! Enclose Vinfo variables with single quotes so this file can be read with ! ! a free format statement. The Vinfo(6) variable must be unique and case ! ! sensitive. It is checked in "mod_ncparm" to set the appropiate ID index ! ! for the information arrays. ! ! ! ! Notice that there is commented information for each variable including ! ! input/output type and internal model units in brackets. There are some ! ! variables that are special and require a particular units for Input and ! ! and output. ! ! ! !============================================================================== ! ! The value in Vinfo(5) here is used to name the unlimited dimension in all ! output NetCDF files. By default it is set to 'time'. Alternatively, you ! can use 'ocean_time' as dimension name so both variable and dimension ! names are the same. This facilitates processing in some NetCDF packages. ! Notice that we use the prefix 'ocean' in the variable name to differentiate ! between oceanic and atmospheric time clocks in fully coupled applications. ! ! Notice that salinity does not have physical units. A commented [PSU] can ! be found below to indicate that the practical salinity scale was used to ! determine conductivity. See, ! ! http://marine.rutgers.edu/po/users/forum/viewtopic.php?t=294 ! !------------------------------------------------------------------------------ ! SVN Repository !------------------------------------------------------------------------------ ! '$URL: https://www.myroms.org/svn/src/trunk/ROMS/External/varinfo.dat $' ! !------------------------------------------------------------------------------ ! Model state variables. !------------------------------------------------------------------------------ ! 'ocean_time' ! Input/Output 'time since initialization' 'second' ! [s] 'time, scalar, series' 'ocean_time' 'idtime' 'nulvar' 1.0d0 'bath' ! Input/Output 'bathymetry' 'meter' ! [m] 'bathymetry, scalar, series' 'ocean_time' 'idbath' 'r2dvar' 1.0d0 'zeta' ! Input/Output 'free-surface' 'meter' ! [m] 'free-surface, scalar, series' 'ocean_time' 'idFsur' 'r2dvar' 1.0d0 'ubar' ! Input/Ouput 'vertically integrated u-momentum component' 'meter second-1' ! [m/s] 'ubar-velocity, scalar, series' 'ocean_time' 'idUbar' 'u2dvar' 1.0d0 'vbar' ! Input/Output 'vertically integrated v-momentum component' 'meter second-1' ! [m/s] 'vbar-velocity, scalar, series' 'ocean_time' 'idVbar' 'v2dvar' 1.0d0 'ubar_eastward' ! Ouput 'eastward vertically integrated momentum component at RHO-points' 'meter second-1' ! [m/s] 'ubar_eastward, scalar, series' 'ocean_time' 'idu2dE' 'r2dvar' 1.0d0 'vbar_northward' ! Output 'northward vertically integrated momentum component at RHO-points' 'meter second-1' ! [m/s] 'vbar_northward, scalar, series' 'ocean_time' 'idv2dN' 'r2dvar' 1.0d0 'u' ! Input/Output 'u-momentum component' 'meter second-1' ! [m/s] 'u-velocity, scalar, series' 'ocean_time' 'idUvel' 'u3dvar' 1.0d0 'v' ! Input/Output 'v-momentum component' 'meter second-1' ! [m/s] 'v-velocity, scalar, series' 'ocean_time' 'idVvel' 'v3dvar' 1.0d0 'u_eastward' ! Output 'eastward momentum component at RHO-points' 'meter second-1' ! [m/s] 'u_eastward, scalar, series' 'ocean_time' 'idu3dE' 'r3dvar' 1.0d0 'v_northward' ! Output 'northward momentum component at RHO-points' 'meter second-1' ! [m/s] 'v_northward, scalar, series' 'ocean_time' 'idv3dN' 'r3dvar' 1.0d0 'u_sur' ! Output 'surface u-momentum component' 'meter second-1' ! [m/s] 'u_sur, scalar, series' 'ocean_time' 'idUsur' 'u2dvar' 1.0d0 'v_sur' ! Output 'surface v-momentum component' 'meter second-1' ! [m/s] 'v_sur, scalar, series' 'ocean_time' 'idVsur' 'v2dvar' 1.0d0 'u_sur_eastward' ! Output 'surface eastward momentum component at RHO-points' 'meter second-1' ! [m/s] 'u_sur_eastward, scalar, series' 'ocean_time' 'idUsuE' 'r2dvar' 1.0d0 'v_sur_northward' ! Output 'surface northward momentum component at RHO-points' 'meter second-1' ! [m/s] 'v_sur_northward, scalar, series' 'ocean_time' 'idVsuN' 'r2dvar' 1.0d0 'w' ! Output 'vertical momentum component' 'meter second-1' ! [m/s] 'w-velocity, scalar, series' 'ocean_time' 'idWvel' 'w3dvar' 1.0d0 'omega' ! Output 'S-coordinate vertical momentum component' 'meter3 second-1' ! [m3/s] 'omega, scalar, series' 'ocean_time' 'idOvel' 'w3dvar' 1.0d0 'rho' ! Output 'density anomaly' 'kilogram meter-3' ! [kg/m3] 'density, scalar, series' 'ocean_time' 'idDano' 'r3dvar' 1.0d0 'temp' ! Input/Output 'potential temperature' 'Celsius' ! [Celsius] 'temperature, scalar, series' 'ocean_time' 'idTvar(itemp)' 'r3dvar' 1.0d0 'salt' ! Input/Output 'salinity' 'nondimensional' ! [PSU] 'salinity, scalar, series' 'ocean_time' 'idTvar(isalt)' 'r3dvar' 1.0d0 'temp_sur' ! Output 'surface potential temperature' 'Celsius' ! [Celsius] 'temp_sur, scalar, series' 'ocean_time' 'idsurT(itemp)' 'r2dvar' 1.0d0 'salt_sur' ! Output 'surface salinity' 'nondimensional' ! [PSU] 'salinity, scalar, series' 'ocean_time' 'idsurT(isalt)' 'r2dvar' 1.0d0 'z_rho' ! Output 'depth of RHO-points' 'meter' ! [meter] 'z_rho, scalar, series' 'ocean_time' 'idpthR' 'r3dvar' 1.0d0 'z_u' ! Output 'depth of U-points' 'meter' ! [meter] 'z_u, scalar, series' 'ocean_time' 'idpthU' 'u3dvar' 1.0d0 'z_v' ! Output 'depth of V-points' 'meter' ! [meter] 'z_v, scalar, series' 'ocean_time' 'idpthV' 'v3dvar' 1.0d0 'z_w' ! Output 'depth of W-points' 'meter' ! [meter] 'z_w, scalar, series' 'ocean_time' 'idpthW' 'w3dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Wet/dry masks. !------------------------------------------------------------------------------ ! 'wetdry_mask_psi' ! Input/Output 'wet/dry mask on PSI-points' 'nondimensional' 'wetdry_mask_psi, scalar, series' 'ocean_time' 'idPwet' 'p2dvar' 1.0d0 'wetdry_mask_rho' ! Input/Output 'wet/dry mask on RHO-points' 'nondimensional' 'wetdry_mask_rho, scalar, series' 'ocean_time' 'idRwet' 'r2dvar' 1.0d0 'wetdry_mask_u' ! Input/Output 'wet/dry mask on U-points' 'nondimensional' 'wetdry_mask_u, scalar, series' 'ocean_time' 'idUwet' 'u2dvar' 1.0d0 'wetdry_mask_v' ! Input/Output 'wet/dry mask on V-points' 'nondimensional' 'wetdry_mask_v, scalar, series' 'ocean_time' 'idVwet' 'v2dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Detided variables !------------------------------------------------------------------------------ ! 'CosW' ! Input/Output 'time-accumulated COS(omega(k)*t)' 'radians' ! [radians] 'CosW, scalar' 'tide_period' 'idCosW' 'nulvar' 1.0d0 'SinW' ! Input/Output 'time-accumulated SIN(omega(k)*t)' 'radians' ! [radians] 'SinW, scalar' 'tide_period' 'idSinW' 'nulvar' 1.0d0 'CosWCosW' ! Input/Output 'time-accumulated COS(omega(k)*t)*COS(omega(l)*t) matrix' 'radians' ! [radians] 'CosWCosW, scalar' 'tide_period' 'idCos2' 'nulvar' 1.0d0 'SinWSinW' ! Input/Output 'time-accumulated SIN(omega(k)*t)*SIN(omega(l)*t) matrix' 'radians' ! [radians] 'SinWSinW, scalar' 'tide_period' 'idSin2' 'nulvar' 1.0d0 'SinWCosW' ! Input/Output 'time-accumulated SIN(omega(k)*t)*COS(omega(l)*t) matrix' 'radians' ! [radians] 'SinWCosW, scalar' 'tide_period' 'idSWCW' 'nulvar' 1.0d0 'zeta_tide' ! Input/Output 'time-accumulated free-surface tide harmonics' 'meter' ! [m] 'zeta_tide, scalar' 'ocean_time' 'idFsuH' 'r2dvar' 1.0d0 'zeta_detided' ! Output 'detided free-surface' 'meter' ! [m] 'zeta_detided, scalar, series' 'ocean_time' 'idFsuD' 'r2dvar' 1.0d0 'ubar_tide' ! Input/Ouput 'time-accumulated 2D u-momentum tide harmonics' 'meter second-1' ! [m/s] 'ubar_tide, scalar' 'ocean_time' 'idu2dH' 'u2dvar' 1.0d0 'ubar_detided' ! Ouput 'detided 2D u-momentum' 'meter second-1' ! [m/s] 'ubar_detided, scalar, series' 'ocean_time' 'idu2dD' 'u2dvar' 1.0d0 'vbar_tide' ! Input/Output 'time-accumulated 2D v-momentum tide harmonics' 'meter second-1' ! [m/s] 'vbar_tide, scalar' 'ocean_time' 'idv2dH' 'v2dvar' 1.0d0 'vbar_detided' ! Output 'detided 2D v-momentum' 'meter second-1' ! [m/s] 'vbar_detided, scalar, series' 'ocean_time' 'idv2dD' 'v2dvar' 1.0d0 'u_tide' ! Input/Output 'time-accumulated 3D u-momentum tide harmonics' 'meter second-1' ! [m/s] 'u_tide, scalar' 'ocean_time' 'idu3dH' 'u3dvar' 1.0d0 'u_detided' ! Output 'detided 3D u-momentum' 'meter second-1' ! [m/s] 'u_detided, scalar, series' 'ocean_time' 'idu3dD' 'u3dvar' 1.0d0 'v_tide' ! Input/Output 'time-accumulated 3D v-momentum tide harmonics' 'meter second-1' ! [m/s] 'v_tide, scalar' 'ocean_time' 'idv3dH' 'v3dvar' 1.0d0 'v_detided' ! Output 'detided 3D v-momentum' 'meter second-1' ! [m/s] 'v_detided, scalar, series' 'ocean_time' 'idv3dD' 'v3dvar' 1.0d0 'temp_tide' ! Input/Output 'time-accumulated potential temperature tide harmonics' 'Celsius' ! [Celsius] 'temp_tide, scalar' 'ocean_time' 'idTrcH(itemp)' 'r3dvar' 1.0d0 'temp_detided' ! Output 'detided potential temperature' 'Celsius' ! [Celsius] 'v_detided, scalar, series' 'ocean_time' 'idTrcD(itemp)' 'r3dvar' 1.0d0 'temp_tide' ! Input/Output 'time-accumulated potential temperature tide harmonics' 'Celsius' ! [Celsius] 'temp_tide, scalar' 'ocean_time' 'idTrcH(itemp)' 'r3dvar' 1.0d0 'temp_detided' ! Output 'detided potential temperature' 'Celsius' ! [Celsius] 'temp_detided, scalar, series' 'ocean_time' 'idTrcD(itemp)' 'r3dvar' 1.0d0 'salt_tide' ! Input/Output 'time-accumulated salinity tide harmonics' 'nondimensional' ! [PSU] 'salt_tide, scalar' 'ocean_time' 'idTrcH(isalt)' 'r3dvar' 1.0d0 'salt_detided' ! Output 'detided potential temperature' 'nondimensional' ! [PSU] 'salt_detided, scalar, series' 'ocean_time' 'idTrcD(isalt)' 'r3dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Momentum stress variables. !------------------------------------------------------------------------------ ! 'sustr' ! Input/Output 'surface u-momentum stress' 'newton meter-2' ! Input: [N/m2] 'surface u-momentum stress, scalar, series' ! [m2/s2] 'sms_time' ! Output: [N/m2] 'idUsms' 'u2dvar' 1.0d0 'svstr' ! Input/Output 'surface v-momentum stress' 'newton meter-2' ! Input: [N/m2] 'surface v-momentum stress, scalar, series' ! [m2/s2] 'sms_time' ! Output: [N/m2] 'idVsms' 'v2dvar' 1.0d0 'bustr' ! Output 'bottom u-momentum stress' 'newton meter-2' ! [m2/s2] 'bottom u-momentum stress, scalar, series' ! Output: [N/m2] 'bms_time' 'idUbms' 'u2dvar' 1.0d0 'bvstr' ! Output 'bottom v-momentum stress' 'newton meter-2' ! [m2/s2] 'bottom v-momentum stress, scalar, series' ! Output: [N/m2] 'bms_time' 'idVbms' 'v2dvar' 1.0d0 'bustrc' ! Output 'current-induced, bottom u-momentum stress' 'newton meter-2' ! [m2/s2] 'bottom u-momentum stress, scalar, series' ! Output: [N/m2] 'bms_time' 'idUbrs' 'r2dvar' 1.0d0 'bvstrc' ! Ouput 'current-induced, bottom v-momentum stress' 'newton meter-2' ! [m2/s2] 'bottom v-momentum stress, scalar, series' ! Output: [N/m2] 'bms_time' 'idVbrs' 'r2dvar' 1.0d0 'bustrw' ! Output 'wind-induced, bottom u-momentum stress' 'newton meter-2' ! [m2/s2] 'bottom u-wave stress, scalar, series' ! Output: [N/m2] 'ocean_time' 'idUbws' 'r2dvar' 1.0d0 'bvstrw' ! Output 'wind-induced, bottom v-momentum stress' 'newton meter-2' ! [m2/s2] 'bottom v-wave stress, scalar, series' ! Output: [N/m2] 'ocean_time' 'idVbws' 'r2dvar' 1.0d0 'bustrcwmax' ! Output 'maximum wind and current, bottom u-wave stress' 'newton meter-2' ! [m2/s2] 'bustrcwmax, scalar, series' ! Output: [N/m2] 'ocean_time' 'idUbcs' 'u2dvar' 1.0d0 'bvstrcwmax' ! Output 'maximum wind and current, bottom v-wave stress' 'newton meter-2' ! [m2/s2] 'bustrcwmax, scalar, series' ! Output: [N/m2] 'ocean_time' 'idVbcs' 'v2dvar' 1.0d0 'Ubot' ! Output 'wind-induced, bed wave orbital u-velocity' 'meter second-1' ! [m/s] 'bed wave u-velocity, scalar, series' 'ocean_time' 'idUbot' 'r2dvar' 1.0d0 'Vbot' ! Output 'wind-induced, bed wave orbital v-velocity' 'meter second-1' ! [m/s] 'bed wave v-velocity, scalar, series' 'ocean_time' 'idVbot' 'r2dvar' 1.0d0 'Ur' ! Output 'bottom u-momentum above bed' 'meter second-1' ! [m/s] 'bottom u-velocity, scalar, series' 'ocean_time' 'idUbur' 'r2dvar' 1.0d0 'Vr' ! Output 'bottom v-momentum above bed' 'meter second-1' ! [m/s] 'bottom v-velocity, scalar, series' 'ocean_time' 'idVbvr' 'r2dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Tracer flux variables. !------------------------------------------------------------------------------ ! 'shflux' ! Input/Output 'surface net heat flux' 'watt meter-2' ! Input: [Watt/m2] 'surface heat flux, scalar, series' ! [Celsius m/s] 'shf_time' ! Output: [Watt/m2] 'idTsur(itemp)' 'r2dvar' 1.0d0 'dQdSST' ! Input 'surface net heat flux sensitivity to SST' 'watt meter-2 Celsius-1' ! Input: [Watt/m2] 'dQdSST, scalar, series' ! [Celsius m/s] 'sst_time' 'iddQdT' 'r2dvar' 1.0d0 'ssflux' ! Output 'surface net salt flux, (E-P)*SALT' 'meter second-1' ! [PSU m/s] 'surface net salt flux, scalar, series' 'ssf_time' 'idTsur(isalt)' 'r2dvar' 1.0d0 'swflux' ! Input 'surface net freswater flux, (E-P)' 'centimeter day-1' ! Input: [m/s] 'surface net salt flux, scalar, series' ! [PSU m/s] 'swf_time' 'idsfwf' 'r2dvar' 1.157407d-7 ! 0.01/86400 'EminusP' ! Input/Output 'bulk_flux surface net freswater flux, (E-P)' 'meter second-1' ! computed by NLM ROMS 'EminusP, scalar, series' ! bulk_flux.F and 'ocean_time' ! needed in adjoint-based 'idEmPf' ! applications 'r2dvar' 1.0d0 'bhflux' ! Input 'bottom net heat flux' 'watt meter-2' ! Input: [Watt/m2] 'bottom heat flux, scalar, series' ! [Celsius m/s] 'bhf_time' 'idTbot(itemp)' 'r2dvar' 1.0d0 'bwflux' ! Input 'bottom net freshwater flux' 'centimeter day-1' ! Input: [m/s] 'bottom water flux, scalar, series' ! [PSU m/s] 'bwf_time' 'idTbot(isalt)' 'r2dvar' 1.157407d-7 ! 0.01/86400 ! !------------------------------------------------------------------------------ ! Ice-related variables !------------------------------------------------------------------------------ ! 'prate' 'precipitation rate' 'kilogram meter-2 second-1' 'precipitation rate, scalar, series' 'prate_time' 'idPrate' 'r2dvar' 1.0d0 'icec' 'observed ice concentration' 'nondimensional' 'ice concentration, scalar series' 'icec_time' 'idIcec' 'r2dvar' 1.0d0 'skt' 'skin temperature' 'degrees Kelvin' 'skin temperature, scalar, series' 'skt_time' 'idSkt' 'r2dvar' 1.0d0 'uice' 'u-component of ice velocity' 'meter second-1' 'u-component of ice velocity, scalar, series' 'ocean_time' 'idUice' 'u2dvar' 1.0d0 'vice' 'v-component of ice velocity' 'meter second-1' 'v-component of ice velocity, scalar, series' 'ocean_time' 'idVice' 'v2dvar' 1.0d0 'aice' 'fraction of cell covered by ice' 'nondimensional' 'ice concentration, scalar, series' 'ocean_time' 'idAice' 'r2dvar' 1.0d0 'hice' 'average ice thickness in cell' 'meter' 'ice thickness, scalar, series' 'ocean_time' 'idHice' 'r2dvar' 1.0d0 'snow_thick' 'thickness of snow cover' 'meter' 'snow thickness, scalar, series' 'ocean_time' 'idHsno' 'r2dvar' 1.0d0 'tisrf' 'temperature of ice surface' 'degrees Celcius' 'surface temperature, scalar, series' 'ocean_time' 'idTice' 'r2dvar' 1.0d0 'ti' 'interior ice temperature' 'degrees Celcius' 'interior temperature, scalar, series' 'ocean_time' 'idTimid' 'r2dvar' 1.0d0 'tau_iw' 'ice-water friction velocity' 'meter second-1' 'friction velocity, scalar, series' 'ocean_time' 'idTauiw' 'r2dvar' 1.0d0 'chu_iw' 'ice-water momentum transfer coefficient' 'meter second-1' 'transfer coefficient, scalar, series' 'ocean_time' 'idChuiw' 'r2dvar' 1.0d0 's0mk' 'salinity of molecular sub-layer under ice' 'nondimensional' 'salinity, scalar, series' 'ocean_time' 'idS0mk' 'r2dvar' 1.0d0 't0mk' 'temperature of molecular sub-layer under ice' 'degrees Celsius' 'temperature, scalar, series' 'ocean_time' 'idT0mk' 'r2dvar' 1.0d0 'sfwat' 'surface melt water thickness on ice' 'meter' 'melt water thickness, scalar, series' 'ocean_time' 'idSfwat' 'r2dvar' 1.0d0 'iomflx' 'ice-ocean mass flux' 'meter second-1' 'ice-ocean mass flux, scalar, series' 'ocean_time' 'idIomflx' 'r2dvar' 1.0d0 'sig11' 'internal ice stress 11 component' 'Newton meter-1' 'ice stress 11, scalar, series' 'ocean_time' 'idSig11' 'r2dvar' 1.0d0 'sig22' 'internal ice stress 22 component' 'Newton meter-1' 'ice stress 22, scalar, series' 'ocean_time' 'idSig22' 'r2dvar' 1.0d0 'sig12' 'internal ice stress 12 component' 'Newton meter-1' 'ice stress 12, scalar, series' 'ocean_time' 'idSig12' 'r2dvar' 1.0d0 'wg2d' 'surface wind gustiness squared from NCEP fluxes' 'meter2 second-2' 'gustiness squared, scalar, series' 'ocean_time' 'idWg2d' 'r2dvar' 1.0d0 'cdd' 'momentum transfer coefficient from NCEP fluxes' 'nondimensional' 'transfer coefficient, scalar, series' 'ocean_time' 'idCdd' 'r2dvar' 1.0d0 'chd' 'sensible heat transfer coefficient from NCEP' 'nondimensional' 'transfer coefficient, scalar, series' 'ocean_time' 'idChd' 'r2dvar' 1.0d0 'ced' 'latent heat transfer coefficient from NCEP' 'nondimensional' 'transfer coefficient, scalar, series' 'ocean_time' 'idCed' 'r2dvar' 1.0d0 'wg2m' 'surface wind gustiness squared from model' 'meter2 second-2' 'gustiness squared, scalar, series' 'ocean_time' 'idWg2m' 'r2dvar' 1.0d0 'cdm' 'momentum transfer coefficient from model' 'nondimensional' 'transfer coefficient, scalar, series' 'ocean_time' 'idCdm' 'r2dvar' 1.0d0 'chm' 'sensible heat transfer coefficient from model' 'nondimensional' 'transfer coefficient, scalar, series' 'ocean_time' 'idChm' 'r2dvar' 1.0d0 'cem' 'latent heat transfer coefficient from model' 'nondimensional' 'transfer coefficient, scalar, series' 'ocean_time' 'idCem' 'r2dvar' 1.0d0 'rhoa' 'near-surface air density from NCEP fluxes' 'kg meter-3' 'air density, scalar, series' 'ocean_time' 'idRhoa' 'r2dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Mixing variables. !------------------------------------------------------------------------------ ! 'tke' ! Output 'turbulent kinetic energy' 'meter2 second-2' ! [m2/s2] 'tke, scalar, series' 'ocean_time' 'idMtke' 'w3dvar' 1.0d0 'gls' ! Output 'turbulent generic length scale' 'meter3 second-2' ! [m3/s2] 'gls, scalar, series' 'ocean_time' 'idMtls' 'w3dvar' 1.0d0 'Lscale' ! Output 'vertical mixing turbulent length scale' 'meter' ! [m] 'Lscale, scalar, series' 'ocean_time' 'idVmLS' 'w3dvar' 1.0d0 'AKv' ! Input/Output 'vertical viscosity coefficient' 'meter2 second-1' ! [m2/s] 'AKv, scalar, series' 'ocean_time' 'idVvis' 'w3dvar' 1.0d0 'AKt' ! Input/Output 'temperature vertical diffusion coefficient' 'meter2 second-1' ! [m2/s] 'AKt, scalar, series' 'ocean_time' 'idTdif' 'w3dvar' 1.0d0 'AKs' ! Input/Output 'salinity vertical diffusion coefficient' 'meter2 second-1' ! [m2/s] 'AKs, scalar, series' 'ocean_time' 'idSdif' 'w3dvar' 1.0d0 'AKk' ! Input/Output 'Turbulent kinetic energy vertical diffusion coefficient' 'meter2 second-1' ! [m2/s] 'AKk, scalar, series' 'ocean_time' 'idVmKK' 'w3dvar' 1.0d0 'AKp' ! Input/Output 'Turbulent length scale vertical diffusion coefficient' 'meter2 second-1' ! [m2/s] 'AKp, scalar, series' 'ocean_time' 'idVmKP' 'w3dvar' 1.0d0 'ghat_temp' ! Input/Output 'potential temperature nonlocal transport' 'nondimensional' ! [nondimensional] 'ghat_temp, scalar, series' 'ocean_time' 'idGhat(itemp)' 'w3dvar' 1.0d0 'ghat_salt' ! Input/Output 'salinity nonlocal transport' 'nondimensional' ! {nondimensional] 'ghat_salt, scalar, series' 'ocean_time' 'idGhat(isalt)' 'w3dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Boundary variables. !------------------------------------------------------------------------------ ! 'zeta_west' ! Input 'free-surface western boundary condition' 'meter' ! [m] 'zeta_west, scalar, series' 'zeta_time' 'idZbry(iwest)' 'nulvar' 1.0d0 'zeta_east' ! Input 'free-surface eastern boundary condition' 'meter' ! [m] 'zeta_east, scalar, series' 'zeta_time' 'idZbry(ieast)' 'nulvar' 1.0d0 'zeta_south' ! Input 'free-surface southern boundary condition' 'meter' ! [m] 'zeta_south, scalar, series' 'zeta_time' 'idZbry(isouth)' 'nulvar' 1.0d0 'zeta_north' ! Input 'free-surface northern boundary condition' 'meter' ! [m] 'zeta_north, scalar, series' 'zeta_time' 'idZbry(inorth)' 'nulvar' 1.0d0 'ubar_west' ! Input '2D u-momentum western boundary condition' 'meter second-1' ! [m/s] 'ubar_west, scalar, series' 'v2d_time' 'idU2bc(iwest)' 'nulvar' 1.0d0 'ubar_east' ! Input '2D u-momentum eastern boundary condition' 'meter second-1' ! [m/s] 'ubar_east, scalar, series' 'v2d_time' 'idU2bc(ieast)' 'nulvar' 1.0d0 'ubar_south' ! Input '2D u-momentum southern boundary condition' 'meter second-1' ! [m/s] 'ubar_south, scalar, series' 'v2d_time' 'idU2bc(isouth)' 'nulvar' 1.0d0 'ubar_north' ! Input '2D u-momentum northern boundary condition' 'meter second-1' ! [m/s] 'ubar_north, scalar, series' 'v2d_time' 'idU2bc(inorth)' 'nulvar' 1.0d0 'vbar_west' ! Input '2D v-momentum western boundary condition' 'meter second-1' ! [m/s] 'vbar_west, scalar, series' 'v2d_time' 'idV2bc(iwest)' 'nulvar' 1.0d0 'vbar_east' ! Input '2D v-momentum eastern boundary condition' 'meter second-1' ! [m/s] 'vbar_east, scalar, series' 'v2d_time' 'idV2bc(ieast)' 'nulvar' 1.0d0 'vbar_south' ! Input '2D v-momentum southern boundary condition' 'meter second-1' ! [m/s] 'vbar_south, scalar, series' 'v2d_time' 'idV2bc(isouth)' 'nulvar' 1.0d0 'vbar_north' ! Input '2D v-momentum northern boundary condition' 'meter second-1' ! [m/s] 'vbar_north, scalar, series' 'v2d_time' 'idV2bc(inorth)' 'nulvar' 1.0d0 'u_west' ! Input '3D u-momentum western boundary condition' 'meter second-1' ! [m/s] 'u_west, scalar, series' 'v3d_time' 'idU3bc(iwest)' 'nulvar' 1.0d0 'u_east' ! Input '3D u-momentum eastern boundary condition' 'meter second-1' ! [m/s] 'u_east, scalar, series' 'v3d_time' 'idU3bc(ieast)' 'nulvar' 1.0d0 'u_south' ! Input '3D u-momentum southern boundary condition' 'meter second-1' ! [m/s] 'u_south, scalar, series' 'v3d_time' 'idU3bc(isouth)' 'nulvar' 1.0d0 'u_north' ! Input '3D u-momentum northern boundary condition' 'meter second-1' ! [m/s] 'u_north, scalar, series' 'v3d_time' 'idU3bc(inorth)' 'nulvar' 1.0d0 'v_west' ! Input '3D v-momentum western boundary condition' 'meter second-1' ! [m/s] 'v_west, scalar, series' 'v3d_time' 'idV3bc(iwest)' 'nulvar' 1.0d0 'v_east' ! Input '3D v-momentum eastern boundary condition' 'meter second-1' ! [m/s] 'v_east, scalar, series' 'v3d_time' 'idV3bc(ieast)' 'nulvar' 1.0d0 'v_south' ! Input '3D v-momentum southern boundary condition' 'meter second-1' ! [m/s] 'v_south, scalar, series' 'v3d_time' 'idV3bc(isouth)' 'nulvar' 1.0d0 'v_north' ! Input '3D v-momentum northern boundary condition' 'meter second-1' ! [m/s] 'v_north, scalar, series' 'v3d_time' 'idV3bc(inorth)' 'nulvar' 1.0d0 'temp_west' ! Input 'temperature western boundary condition' 'Celsius' ! [Celsius] 'temp_west, scalar, series' 'temp_time' 'idTbry(iwest,itemp)' 'nulvar' 1.0d0 'temp_east' ! Input 'temperature eastern boundary condition' 'Celsius' ! [Celsius] 'temp_east, scalar, series' 'temp_time' 'idTbry(ieast,itemp)' 'nulvar' 1.0d0 'temp_south' ! Input 'temperature southern boundary condition' 'Celsius' ! [Celsius] 'temp_south, scalar, series' 'temp_time' 'idTbry(isouth,itemp)' 'nulvar' 1.0d0 'temp_north' ! Input 'temperature northern boundary condition' 'Celsius' ! [Celsius] 'temp_north, scalar, series' 'temp_time' 'idTbry(inorth,itemp)' 'nulvar' 1.0d0 'salt_west' ! Input 'salinity western boundary condition' 'nondimensional' ! [PSU] 'salt_west, scalar, series' 'salt_time' 'idTbry(iwest,isalt)' 'nulvar' 1.0d0 'salt_east' ! Input 'salinity eastern boundary condition' 'nondimensional' ! [PSU] 'salt_east, scalar, series' 'salt_time' 'idTbry(ieast,isalt)' 'nulvar' 1.0d0 'salt_south' ! Input 'salinity southern boundary condition' 'nondimensional' ! [PSU] 'salt_south, scalar, series' 'salt_time' 'idTbry(isouth,isalt)' 'nulvar' 1.0d0 'salt_north' ! Input 'salinity northern boundary condition' 'nondimensional' ! [PSU] 'salt_north, scalar, series' 'salt_time' 'idTbry(inorth,isalt)' 'nulvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Atmospheric forcing variables. !------------------------------------------------------------------------------ ! 'Pair' ! Input 'surface air pressure' 'millibar' ! [millibar] 'Pair, scalar, series' 'pair_time' 'idPair' 'r2dvar' 1.0d0 'Tair' ! Input 'surface air temperature' 'Celsius' ! [Kelvin] 'Tair, scalar, series' 'tair_time' 'idTair' 'r2dvar' 1.0d0 'Qair' ! Input 'surface air relative humidity' ! relative or specific 'percentage' ! [percentage or g/kg ] 'Qair, scalar, series' 'qair_time' 'idQair' 'r2dvar' ! relative specific 0.01d0 ! 1/100 or 1.0 'cloud' ! Input 'cloud fraction' 'nondimensional' ! [nondimensional] 'cloud, scalar, series' 'cloud_time' 'idCfra' 'r2dvar' 1.0d0 'swrad' ! Input/Output 'solar shortwave radiation flux' 'watt meter-2' ! Input: [Watt/m2] 'shortwave radiation, scalar, series' ! [Celsius m/s] 'srf_time' ! Output: [Watt/m2] 'idSrad' 'r2dvar' 1.0d0 'lwrad_down' ! Input 'downwelling longwave radiation flux' 'watt meter-2' ! Input: [Watt/m2] 'downwelling longwave radiation, scalar, series' ! [Celsius m/s] 'lrf_time' 'idLdwn' 'r2dvar' 1.0d0 'lwrad' ! Input/Output 'net longwave radiation flux' 'watt meter-2' ! Input: [Watt/m2] 'longwave radiation, scalar, series' ! [Celsius m/s] 'lrf_time' ! Output: [Watt/m2] 'idLrad' 'r2dvar' 1.0d0 'latent' ! Output 'net latent heat flux' 'watt meter-2' 'latent heat flux, scalar, series' ! [Celsius m/s] 'lhf_time' ! Output: [Watt/m2] 'idLhea' 'r2dvar' 1.0d0 'sensible' ! Output 'net sensible heat flux' 'watt meter-2' 'sensible heat flux, scalar, series' ! [Celsius m/s] 'shf_time' ! Output: [Watt/m2] 'idShea' 'r2dvar' 1.0d0 'rain' ! Input 'rain fall rate' 'kilogram meter-2 second-1' ! [kg m2/s] 'rain, scalar, series' 'rain_time' 'idrain' 'r2dvar' 1.0d0 ! 1/rhow (0.001 m3/kg) if m/s 'evaporation' ! Input 'evaporation rate' 'kilogram meter-2 second-1' ! [kg m2/s] 'evaporation, scalar, series' 'evap_time' 'idevap' 'r2dvar' 1.0d0 ! 1/rhow (0.001 m3/kg) if m/s 'Uwind' ! Input 'surface u-wind component' 'meter second-1' ! [m/s] 'u-wind, scalar, series' 'wind_time' 'idUair' 'r2dvar' 1.0d0 'Vwind' ! Input 'surface v-wind component' 'meter second-1' ! [m/s] 'v-wind, scalar, series' 'wind_time' 'idVair' 'r2dvar' 1.0d0 'Dwave' ! Input 'wind-induced wave direction' 'degrees' ! [radians] 'Dwave, scalar, series' 'wave_time' 'idWdir' 'r2dvar' 0.017453292519943295 ! pi/180 'Hwave' ! Input 'wind-induced significant wave height' 'meter' ! [m] 'Hwave, scalar, series' 'wave_time' 'idWamp' 'r2dvar' 1.0d0 'Lwave' ! Input 'wind-induced mean wavelength' 'meter' ! [m] 'Lwave, scalar, series' 'wave_time' 'idWlen' 'r2dvar' 1.0 'Pwave_top' ! Input 'wind-induced peak surface wave period' 'second' ! [s] 'Pwave_top, scalar, series' 'wave_time' 'idWptp' 'r2dvar' 1.0d0 'Pwave_bot' ! Input 'wind-induced bottom wave Period' 'second' ! [s] 'Pwave_bot, scalar, series' 'wave_time' 'idWpbt' 'r2dvar' 1.0d0 'Ub_swan' ! Input 'wind-induced bottom orbital velocity' 'meter second-1' ! [m/s] 'Ub_swan, scalar, series' 'wave_time' 'idWorb' 'r2dvar' 1.0d0 'Wave_dissip' ! Input 'wave dissipation' 'Watts meter-2' ! [W/m2] 'Wave_dissip, scalar, series' 'wave_time' 'idWdis' 'r2dvar' 0.00097561 !1/rho0 'Wave_break' ! Input 'percent wave breaking' 'nondimensionsal' ! [] 'Wave_break, scalar, series' 'wave_time' 'idWbrk' 'r2dvar' 1.0d0 'Sxx_bar' ! Output 'vertically-integrated radiation stress, Sxx-component' 'meter2 second2' ! [s] 'Sxx, scalar, series' 'ocean_time' 'idW2xx' 'r2dvar' 1.0d0 'Sxy_bar' ! Output 'vertically-integrated radiation stress, Sxy-component' 'meter2 second2' ! [s] 'Sxy_bar, scalar, series' 'ocean_time' 'idW2xy' 'r2dvar' 1.0d0 'Syy_bar' ! Output 'vertically-integrated radiation stress, Syy-component' 'meter2 second2' ! [s] 'Syy_bar, scalar, series' 'ocean_time' 'idW2yy' 'r2dvar' 1.0d0 'Sxx' ! Output '3D horizontal radiation stress, Sxx-component' 'meter2 second2' ! [s] 'Sxx, scalar, series' 'ocean_time' 'idW3xx' 'r3dvar' 1.0d0 'Sxy' ! Output '3D horizontal radiation stress, Sxy-component' 'meter2 second2' ! [s] 'Sxy, scalar, series' 'ocean_time' 'idW3xy' 'r3dvar' 1.0d0 'Syy' ! Output '3D radiation stress, Syy-component' 'meter2 second2' ! [s] 'Syy, scalar, series' 'ocean_time' 'idW3yy' 'r3dvar' 1.0d0 'Szx' ! Output '3D vertical radiation stress, Szx-component' 'meter2 second2' ! [s] 'Szx, scalar, series' 'ocean_time' 'idW3zx' 'r3dvar' 1.0d0 'Szy' ! Output '3D vertical radiation stress, Szy-component' 'meter2 second2' ! [s] 'Szy, scalar, series' 'ocean_time' 'idW3zy' 'r3dvar' 1.0d0 'ubar_Rstress' ! Output 'vertically-integrated u-radiation stress' 'newton meter-2' ! [N/m2] 'ubar_Rstress, scalar, series' 'ocean_time' 'idU2rs' 'u2dvar' 1.0d0 'ubar_stokes' ! Output 'vertically-integrated u-Stokes drift velocity' 'meter second-1' ! [m/s] 'ubar_stokes-velocity, scalar, series' 'ocean_time' 'idU2Sd' 'u2dvar' 1.0d0 'vbar_Rstress' ! Output 'vertically-integrated v-radiation stress' 'newton meter-2' ! [N/m2] 'ubar_Rstress, scalar, series' 'ocean_time' 'idV2rs' 'v2dvar' 1.0d0 'vbar_stokes' ! Output 'vertically-integrated v-Stokes drift velocity' 'meter second-1' ! [m/s] 'vbar_stokes, scalar, series' 'ocean_time' 'idV2Sd' 'v2dvar' 1.0d0 'u_Rstress' ! Output 'u-radiation stress' 'newton meter-2' ! [N/m2] 'u_Rstress, scalar, series' 'ocean_time' 'idU3rs' 'u3dvar' 1.0d0 'u_stokes' ! Output 'u-Stokes drift velocity' 'meter second-1' ! [m/s] 'u_stokes, scalar, series' 'wave_time' 'idU3Sd' 'u3dvar' 1.0d0 'v_Rstress' ! Output 'v-radiation stress' 'newton meter-2' ! [N/m2] 'v_Rstress, scalar, series' 'ocean_time' 'idV3rs' 'v3dvar' 1.0d0 'v_stokes' ! Output 'v-Stokes drift velocity' 'meter second-1' ! [m/s] 'v_stokes, scalar, series' 'ocean_time' 'idV3Sd' 'v3dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Tidal forcing variables. !------------------------------------------------------------------------------ ! 'tide_period' ! Input 'tidal period' 'hours' ! [s] 'tide_period, scalar, series' 'tide_period' 'idTper' 'nulvar' 3600.0d0 ! 60*60 'tide_Eamp' ! Input 'tidal elevation amplitude' 'meter' ! [m] 'SSH_Tamp, scalar, series' 'tide_period' 'idTzam' 'r2dvar' 1.0d0 'tide_Ephase' ! Input 'tidal elevation phase angle' 'degrees' ! [radians] 'SSH_Tphase, scalar, series' 'tide_period' 'idTzph' 'r2dvar' 0.017453292519943295 ! pi/180 'tide_Cphase' ! Input 'tidal current phase angle' 'degrees' ! [radians] 'tide_Cphase, scalar, series' 'tide_period' 'idTvph' 'r2dvar' 0.017453292519943295 ! pi/180 'tide_Cangle' ! Input 'tidal current inclination angle' 'degrees' ! [radians] 'tide_Cangle, scalar, series' 'tide_period' 'idTvan' 'r2dvar' 0.017453292519943295 ! pi/180 'tide_Cmax' ! Input 'maximum tidal current, ellipse major axis' 'meter second-1' ! [m/s] 'tide_Cmax, scalar, series' 'tide_period' 'idTvma' 'r2dvar' 1.0d0 'tide_Cmin' ! Input 'minimum tidal current, ellipse minor axis' 'meter second-1' ! [m/s] 'tide_Cmin, scalar, series' 'tide_period' 'idTvmi' 'r2dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! River forcing variables. !------------------------------------------------------------------------------ ! 'river_Xposition' ! Input 'river runoff XI-positions at RHO-points' 'nondimensional' ! [nondimensional] 'river_Xposition, scalar' 'river' 'idRxpo' 'nulvar' 1.0d0 'river_Eposition' ! Input 'river runoff ETA-positions at RHO-points' 'nondimensional' ! [nondimensional] 'river_Eposition' 'river' 'idRepo' 'nulvar' 1.0d0 'river_direction' ! Input 'river runoff direction' 'nondimensional' ! [nondimensional] 'river_direction, scalar' 'river' 'idRdir' 'nulvar' 1.0d0 'river_Vshape' ! Input 'river runoff mass transport vertical profile' 'nondimensional' ! [nondimensional] 'river_Vshape, scalar' 'river' 'idRvsh' 'nulvar' 1.0d0 'river_transport' ! Input 'river runoff mass transport' 'meter3 second-1' ! [m3/s] 'river_transport, scalar, series' 'river_time' 'idRtra' 'nulvar' 1.0d0 'river_flag' ! Input 'river runoff flag' 'nondimensional' ! [nondimensional] 'river_flag, scalar' 'river' 'idRflg' 'nulvar' 1.0d0 'river_temp' ! Input 'river runoff potential temperature' 'Celsius' ! [Celsius] 'river_temp, scalar, series' 'river_time' 'idRtrc(itemp)' 'nulvar' 1.0d0 'river_salt' ! Input 'river runoff salinity' 'nondimensional' ! [PSU] 'river_salt, scalar, series' 'river_time' 'idRtrc(isalt)' 'nulvar' 1.0d0 'river_dye_' ! Input 'river runoff dye concentration' 'kilogram meter-3' ! [kg/m3] 'river_dye, scalar, series' 'river_time' 'idRtrc(inert(i))' 'nulvar' 1.0d0 'river_mud_' ! Input 'river runoff suspended sediment concentration' 'kilogram meter-3' ! [kg/m3] 'river_sediment, scalar, series' 'river_time' 'idRtrc(idmud)' 'nulvar' 1.0d0 'river_sand_' ! Input 'river runoff suspended sediment concentration' 'kilogram meter-3' ! [kg/m3] 'river_sediment, scalar, series' 'river_time' 'idRtrc(isand)' 'nulvar' 1.0d0 'river_nutrient' ! Input 'river runoff nutrient' 'millimole_nitrogen meter-3' ! [millimole/m3] 'river_nutrient, scalar, series' 'river_time' 'idRtrc(iNutr)' 'nulvar' 1.0d0 'river_NO3' ! Input 'river runoff NO3' 'millimole_nitrogen meter-3' ! [millimole/m3] 'river_NO3, scalar, series' 'river_time' 'idRtrc(iNO3_)' 'nulvar' 1.0d0 'river_NH4' ! Input 'river runoff NH4' 'millimole_nitrogen meter-3' ! [millimole/m3] 'river_NH4, scalar, series' 'river_time' 'idRtrc(iNH4_)' 'nulvar' 1.0d0 'river_DON' ! Input 'river runoff dissolved organic nitrogen' 'millimole_nitrogen meter-3' ! [millimole/m3] 'river_DON, scalar, series' 'river_time' 'idRtrc(iDON_)' 'nulvar' 1.0d0 'river_PON' ! Input 'river runoff particulate organic nitrogen' 'millimole_nitrogen meter-3' ! [millimole/m3] 'river_DON, scalar, series' 'river_time' 'idRtrc(iDON_)' 'nulvar' 1.0d0 'river_detritus' ! Input 'river runoff detritus' 'millimole_nitrogen meter-3' ! [millimole/m3] 'river_detritus, scalar, series' 'river_time' 'idRtrc(iSDet)' 'nulvar' 1.0d0 'river_SDeN' ! Input 'river runoff SDeN' 'millimole_nitrogen meter-3' ! [millimole/m3] 'river_SDeN, scalar, series' 'river_time' 'idRtrc(iSDeN)' 'nulvar' 1.0d0 'river_SDeC' ! Input 'river runoff SDeC' 'millimole meter-3' ! [millimole/m3] 'river_SDeC, scalar, series' 'river_time' 'idRtrc(iSDeC)' 'nulvar' 1.0d0 'river_TIC' ! Input 'river runoff TIC' 'millimole_carbon meter-3' ! [millimole/m3] 'river_TIC, scalar, series' 'river_time' 'idRtrc(iTIC_)' 'nulvar' 1.0d0 'river_alkalinity' ! Input 'river runoff alkalinity' 'milliequivalents meter-3' ! [milliequivalens/m3] 'river_alkalinity, scalar, series' 'river_time' 'idRtrc(iTAlk)' 'nulvar' 1.0d0 'river_Oxyg' ! Input 'river runoff oxygen' 'millimole_oxygen meter-3' ! [millimole/m3] 'river_Oxyg, scalar, series' 'river_time' 'idRtrc(iOxyg)' 'nulvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Boundary layer variables. !------------------------------------------------------------------------------ ! 'Hsbl' ! Input/Output 'depth of oceanic surface boundary layer' 'meter' ! [m] 'Hsbl, scalar, series' 'ocean_time' 'idHsbl' 'r2dvar' 1.0d0 'Hbbl' ! Input/Output 'depth of oceanic bottom boundary layer' 'meter' ! [m] 'Hbbl, scalar, series' 'ocean_time' 'idHbbl' 'r2dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Climatotogy variables. Active and passive climatology tracers variable ! metadata is set internally in "mod_ncparam". !------------------------------------------------------------------------------ ! 'zeta' ! Input 'sea surface height climatology' 'meter' ! [m] 'zeta, scalar, series' 'zeta_time' 'idSSHc' 'r2dvar' 1.0d0 'ubar' ! Input 'vertically integrated u-momentum climatology' 'meter second-1' ! [m/s] 'ubar-velocity, scalar, series' 'v2d_time' 'idUbcl' 'u2dvar' 1.0d0 'vbar' ! Input 'vertically integrated v-momentum climatology' 'meter second-1' ! [m/s] 'vbar-velocity, scalar, series' 'v2d_time' 'idVbcl' 'v2dvar' 1.0d0 'u' ! Input 'u-momentum component climatology' 'meter second-1' ! [m/s] 'u-velocity, scalar, series' 'v3d_time' 'idUclm' 'u3dvar' 1.0d0 'v' ! Input 'v-momentum component climatology' 'meter second-1' ! [m/s] 'v-velocity, scalar, series' 'v3d_time' 'idVclm' 'v3dvar' 1.0d0 'SSS' ! Input 'sea surface salinity climatology' 'nondimensional' ! [PSU] 'SSS, scalar, series' 'sss_time' 'idSSSc' 'r2dvar' 1.0d0 'SST' ! Input 'sea surface temperature climatology' 'Celsius' ! [Celsius] 'SST, scalar, series' 'sst_time' 'idSSTc' 'r2dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Nudging to climatology time scales. We can have a generic variable for all ! tracer nudging time scales or individual variables for each active and ! passive tracer. The metadata for the individual variables is set internally ! in "mod_ncparam". !------------------------------------------------------------------------------ ! 'M2_NudgeCoef' ! Input '2D momentum inverse nudging coefficients' 'day-1' ! [1/s] 'M2_NudgeCoef, scalar' 'nulvar' 'idM2nc' 'r2dvar' 1.157407d-5 ! 1/86400 'M3_NudgeCoef' ! Input '3D momentum inverse nudging coefficients' 'day-1' ! [1/s] 'M3_NudgeCoef, scalar' 'nulvar' 'idM3nc' 'r3dvar' 1.157407d-5 ! 1/86400 'tracer_NudgeCoef' ! Input 'generic tracer inverse nudging coefficients' 'day-1' ! [1/s] 'tracer_NudgeCoef, scalar' 'nulvar' 'idgTnc' 'r3dvar' 1.157407d-5 ! 1/86400 ! !------------------------------------------------------------------------------ ! Adjoint sensitivy variables. The units below are the same as the state. ! However, the input functional can have squared, energy, nondimensional, ! or other units. !------------------------------------------------------------------------------ ! 'zeta' ! Input 'sea surface height functional' 'meter' ! [m] 'zeta, scalar, series' 'zeta_time' 'idZads' 'r2dvar' 1.0d0 'ubar' ! Input 'vertically integrated u-momentum functional' 'meter second-1' ! [m/s] 'ubar-velocity, scalar, series' 'v2d_time' 'idUbas' 'u2dvar' 1.0d0 'vbar' ! Input 'vertically integrated v-momentum functional' 'meter second-1' ! [m/s] 'vbar-velocity, scalar, series' 'v2d_time' 'idVbas' 'v2dvar' 1.0d0 'u' ! Input 'u-momentum component functional' 'meter second-1' ! [m/s] 'u-velocity, scalar, series' 'v3d_time' 'idUads' 'u3dvar' 1.0d0 'v' ! Input 'v-momentum component functional' 'meter second-1' ! [m/s] 'v-velocity, scalar, series' 'v3d_time' 'idVads' 'v3dvar' 1.0d0 'w' ! Input 'w-momentum component functional' 'meter second-1' ! [m/s] 'w-velocity, scalar, series' 'v3d_time' 'idWads' 'w3dvar' 1.0d0 'temp' ! Input 'potential temperature functional' 'Celsius' ! [Celsius] 'temp_time, scalar, series' 'temp_time' 'idTads(itemp)' 'r3dvar' 1.0d0 'salt' ! Input 'salinity functional' 'nondimensional' ! [PSU] 'salt_time, scalar, series' 'salt_time' 'idTads(isalt)' 'r3dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Tangent linear model impulse forcing variables. ! ! Notice that additional metadata is need here because with need different ! indices to avoid conflict with the forward basic state variables. They ! are used at the same time. The passive tracers (NAT+1:NT) are assigned ! internally to the same values as the basic state. !------------------------------------------------------------------------------ ! 'zeta' ! Input 'free-surface impulse forcing' 'meter' ! [m] 'zeta, scalar, series' 'zeta_time' 'idZtlf' 'r2dvar' 1.0d0 'ubar' ! Input 'vertically integrated u-momentum impulse forcing' 'meter second-1' ! [m/s] 'ubar-velocity, scalar, series' 'v2d_time' 'idUbtf' 'u2dvar' 1.0d0 'vbar' ! Input 'vertically integrated v-momentum impulse forcing' 'meter second-1' ! [m/s] 'vbar-velocity, scalar, series' 'v2d_time' 'idVbtf' 'v2dvar' 1.0d0 'u' ! Input 'u-momentum component impulse forcing' 'meter second-1' ! [m/s] 'u-velocity, scalar, series' 'v3d_time' 'idUtlf' 'u3dvar' 1.0d0 'v' ! Input 'v-momentum component impulse forcing' 'meter second-1' ! [m/s] 'v-velocity, scalar, series' 'v3d_time' 'idVtlf' 'v3dvar' 1.0d0 'temp' ! Input 'potential temperature impulse forcing' 'Celsius' ! [Celsius] 'temp_time, scalar, series' 'temp_time' 'idTtlf(itemp)' 'r3dvar' 1.0d0 'salt' ! Input 'salinity impulse forcing' 'nondimensional' ! [PSU] 'salt_time, scalar, series' 'salt_time' 'idTtlf(isalt)' 'r3dvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Inert passive tracer variables. !------------------------------------------------------------------------------ ! ! Only one entry should be specified here. This entry contain all the ! information necessary to process all NPT fields. The variable name is ! arbitrary and you may choose any unique name for Vinfo(1) that is not ! already defined. The identifier for Vinfo(6) must be "idTvar(inert(i))". ! 'dye_' ! Input/Output 'dye concentration' 'kilogram meter-3' ! [kg/m3] 'dye_, scalar, series' 'ocean_time' 'idTvar(inert(i))' 'r3dvar' 1.0d0 'dye_west_' ! Input 'dye concentration western boundary condition' 'kilogram meter-3' ! [kg/m3] 'dye_west_, scalar, series' 'dye_time' 'idTbry(iwest,inert(i))' 'nulvar' 1.0d0 'dye_east_' ! Input 'dye concentration eastern boundary condition' 'kilogram meter-3' ! [kg/m3] 'dye_east_, scalar, series' 'dye_time' 'idTbry(ieast,inert(i))' 'nulvar' 1.0d0 'dye_south_' ! Input 'dye concentration southern boundary condition' 'kilogram meter-3' ! [kg/m3] 'dye_south_, scalar, series' 'dye_time' 'idTbry(isouth,inert(i))' 'nulvar' 1.0d0 'dye_north_' ! Input 'dye concentration northern boundary condition' 'kilogram meter-3' ! [kg/m3] 'dye_north_, scalar, series' 'dye_time' 'idTbry(inorth,inert(i))' 'nulvar' 1.0d0 ! !------------------------------------------------------------------------------ ! Sediment variables: The actual variable name for some of the sediment ! tracers are set-up internally in "mod_ncparam.F". ! It depends on the mumber of cohesive and noncohesive sediment tracers ! for a particular application. For example if you have 1 cohesive and ! 2 noncohesive sediment classes, the variable names are: ! ! "mud_" becomes "mud_01" ! "mud_west_" becomes "mud_west_01" ! "mud_east_" becomes "mud_east_01" ! "mud_south_" becomes "mud_south_01" ! "mud_north_" becomes "mud_north_01" ! ! "sand_" becomes "sand_01", "sand_02" ! "sand_west" becomes "sand_west_01", "sand_west_02" ! "sand_east" becomes "sand_east_01", "sand_east_02" ! "sand_south" becomes "sand_south_01", "sand_south_02" ! "sand_north" becomes "sand_north_01", "sand_north_02" !------------------------------------------------------------------------------ ! 'mud_' ! Input/Output 'suspended cohesive sediment' 'kilogram meter-3' ! [kg/m3] 'mud_, scalar, series' 'ocean_time' 'idTvar(idmud(i))' 'r3dvar' 1.0d0 'mud_west_' ! Input 'suspended cohesive sediment western boundary condition' 'kilogram meter-3' ! [kg/m3] 'mud_west_, scalar, series' 'mud_time' 'idTbry(iwest,idmud(i))' 'r3dvar' 1.0d0 'mud_east_' ! Input 'suspended cohesive sediment eastern boundary condition' 'kilogram meter-3' ! [kg/m3] 'mud_east_, scalar, series' 'mud_time' 'idTbry(ieast,idmud(i))' 'nulvar' 1.0d0 'mud_south_' ! Input 'suspended cohesive sediment southern boundary condition' 'kilogram meter-3' ! [kg/m3] 'mud_south_, scalar, series' 'mud_time' 'idTbry(isouth,idmud(i))' 'nulvar' 1.0d0 'mud_north_' ! Input 'suspended cohesive sediment northern boundary condition' 'kilogram meter-3' ! [kg/m3] 'mud_north_, scalar, series' 'mud_time' 'idTbry(inorth,idmud(i))' 'nulvar' 1.0d0 'sand_' ! Input/Output 'suspended noncohesive sediment' 'kilogram meter-3' ! [kg/m3] 'sand_, scalar, series' 'ocean_time' 'idTvar(isand(i))' 'r3dvar' 1.0d0 'sand_west_' ! Input 'suspended noncohesive sediment western boundary condition' 'kilogram meter-3' ! [kg/m3] 'sand_west_, scalar, series' 'sand_time' 'idTbry(iwest,isand(i))' 'nulvar' 1.0d0 'sand_east_' ! Input 'suspended noncohesive sediment eastern boundary condition' 'kilogram meter-3' ! [kg/m3] 'sand_east_, scalar, series' 'sand_time' 'idTbry(ieast,isand(i))' 'nulvar' 1.0d0 'sand_south_' ! Input 'suspended noncohesive sediment southern boundary condition' 'kilogram meter-3' ! [kg/m3] 'sand_south_, scalar, series' 'sand_time' 'idTbry(isouth,isand(i))' 'nulvar' 1.0d0 'sand_north_' ! Input 'suspended noncohesive sediment northern boundary condition' 'kilogram meter-3' ! [kg/m3] 'sand_north_, scalar, series' 'sand_time' 'idTbry(inorth,isand(i))' 'nulvar' 1.0d0 'mudfrac_' ! Input/Output 'cohesive sediment fraction' 'nondimensional' ! [nondimensional] 'mudfrac_, scalar, series' 'ocean_time' 'idfrac' 'b3dvar' 1.0d0 'sandfrac_' ! Input/Output 'noncohesive sediment fraction' 'nondimensional' ! [nondimensional] 'sandfrac_, scalar, series' 'ocean_time' 'idfrac' 'b3dvar' 1.0d0 'mudmass_' ! Input/Output 'cohesive sediment mass' 'kilogram meter-2' ! [kg/m2] 'mudmass_, scalar, series' 'ocean_time' 'idBmas' 'b3dvar' 1.0d0 'sandmass_' ! Input/Output 'noncohesive sediment mass' 'kilogram meter-2' ! [kg/m2] 'sandmass_, scalar, series' 'ocean_time' 'idBmas' 'b3dvar' 1.0d0 'bedload_Usand_' ! Input/Output 'bed load flux of sand in U-direction' 'kilogram meter-1 s-1' ! [kg/m/s] 'bedload_Usand_, scalar, series' 'ocean_time' 'idUbld' 'u2dvar' 1.0d0 'bedload_Umud_' ! Input/Output 'bed load flux of mud in U-direction' 'kilogram meter-1 s-1' ! [kg/m/s] 'bedload_Umud_, scalar, series' 'ocean_time' 'idUbld' 'u2dvar' 1.0d0 'bedload_Vsand_' ! Input/Output 'bed load flux of sand in V-direction' 'kilogram meter-1 s-1' ! [kg/m/s] 'bedload_Vsand_, scalar, series' 'ocean_time' 'idVbld' 'v2dvar' 1.0d0 'bedload_Vmud_' ! Input/Output 'bed load flux of mud in V-direction' 'kilogram meter-1 s-1' ! [kg/m/s] 'bedload_Vmud_, scalar, series' 'ocean_time' 'idVbld' 'v2dvar' 1.0d0 'ero_flux' ! Output 'erosion flux' 'kilogram meter-2' ! [kg/m2] 'ero_flux, scalar, series' 'ocean_time' 'idBott(idefx)' 'r2dvar' 1.0d0 'dep_net' ! Output 'erosion or deposition' 'meter' ! [m] 'dep_net, scalar, series' 'ocean_time' 'idBott(idnet)' 'r2dvar' 1.0d0 'tau_crit_off' ! Output 'Offset for critical shear stress equation' 'kg/Pa/s' ! [kg/Pa/s] 'tau_crit_off, scalar, series' 'ocean_time' 'idBott(idoff)' 'r2dvar' 1.0d0 'tau_crit_slope' ! Output 'Slope for critical shear stress equation' 'Pa/s' ! [Pa/s] 'tau_crit_slope, scalar, series' 'ocean_time' 'idBott(idslp)' 'r2dvar' 1.0d0 'tau_crit_time' ! Output 'Nudging time for critical shear stress equation' 's-1' ! [s-1] 'tau_crit_time, scalar, series' 'ocean_time' 'idBott(idtim)' 'r2dvar' 1.0d0 'bed_thickness' ! Input/Output 'sediment bed layer thickness' 'meter' ! [m] 'bed_thickness, scalar, series' 'ocean_time' 'idSbed(ithck)' 'b3dvar' 1.0d0 'bed_age' ! Input/Output 'sediment layer age' 'seconds' ! [s] 'bed_age, scalar, series' 'ocean_time' 'idSbed(iaged)' 'b3dvar' 1.0d0 'bed_porosity' ! Input/Output 'sediment layer porosity' 'nondimensional' ! [nondimensional] 'bed_porosity, scalar, series' 'ocean_time' 'idSbed(iporo)' 'b3dvar' 1.0d0 'bed_biodiff' ! Input/Output 'biodiffusivity at bottom of each layer' 'meter2 second-1' ! [m2/s] 'bed_biodiff, scalar, series' 'ocean_time' 'idSbed(idiff)' 'b3dvar' 1.0d0 'bed_tau_crit' ! Input/Output 'tau critical in each layer' 'Newtons meter-2' ! [N/m2] 'bed_tau_crit, scalar, series' 'ocean_time' 'idSbed(ibtcr)' 'b3dvar' 1.0d0 'grain_diameter' ! Input/Output 'sediment median grain diameter size' 'meter' ! [m] 'grain_diameter, scalar, series' 'ocean_time' 'idBott(isd50)' 'r2dvar' 1.0d0 'grain_density' ! Input/Output 'sediment median grain density' 'kilogram meter3' ! [kg/m3] 'grain_density, scalar, series' 'ocean_time' 'idBott(idens)' 'r2dvar' 1.0d0 'settling_vel' ! Input/Output 'sediment median grain settling velocity' 'meter second-1' ! [m/s] 'settling_vel, scalar, series' 'ocean_time' 'idBott(iwsed)' 'r2dvar' 1.0d0 'erosion_stress' ! Input/Output 'sediment median critical erosion stress' 'newton meter-2' ! [N/m2] 'erosion_stress, scalar, series' 'ocean_time' 'idBott(itauc)' 'r2dvar' 1.0d0 'ripple_length' ! Input/Output 'bottom ripple length' 'meter' ! [m] 'ripple_length, scalar, series' 'ocean_time' 'idBott(irlen)' 'r2dvar' 1.0d0 'ripple_height' ! Input/Output 'bottom ripple height' 'meter' ! [m] 'ripple_height, scalar, series' 'ocean_time' 'idBott(irhgt)' 'r2dvar' 1.0d0 'bed_wave_amp' ! Input/Output 'bed wave excursion amplitude' 'meter' ! [m] 'bed_wave_amp, scalar, series' 'ocean_time' 'idBott(ibwav)' 'r2dvar' 1.0d0 'rdrag' ! Input/Output 'linear bottom drag coefficient' 'meter second-1' ! [m/s] 'rdrag, scalar, series' 'ocean_time' 'idragL' 'r2dvar' 1.0d0 'rdrag2' ! Input/Output 'quadratic bottom drag coefficient' 'nondimensional' ! [nondimensional] 'rdrag2, scalar, series' 'ocean_time' 'idragQ' 'r2dvar' 1.0d0 'ZoBot' ! Input/Output 'time invariant, bottom roughness length' 'meter' ! [m] 'ZoBot, scalar, series' 'ocean_time' 'idZoBL' 'r2dvar' 1.0d0 'Zo_def' ! Input/Output 'default bottom roughness length' 'meter' ! [m] 'Zo_def, scalar, series' 'ocean_time' 'idBott(izdef)' 'r2dvar' 1.0d0 'Zo_app' ! Input/Output 'apparent bottom roughness length' 'meter' ! [m] 'Zo_app, scalar, series' 'ocean_time' 'idBott(izapp)' 'r2dvar' 1.0d0 'Zo_Nik' ! Input/Output 'Nikaradse bottom roughness length' 'meter' ! [m] 'Zo_Nik, scalar, series' 'ocean_time' 'idBott(izNik)' 'r2dvar' 1.0d0 'Zo_bio' ! Input/Output 'biological bottom roughness length' 'meter' ! [m] 'Zo_bio, scalar, series' 'ocean_time' 'idBott(izbio)' 'r2dvar' 1.0d0 'Zo_bedform' ! Input/Output 'bed form bottom roughness length' 'meter' ! [m] 'Zo_bedform, scalar, series' 'ocean_time' 'idBott(izbfm)' 'r2dvar' 1.0d0 'Zo_bedload' ! Input/Output 'bed load bottom roughness length' 'meter' ! [m] 'Zo_bedload, scalar, series' 'ocean_time' 'idBott(izbld)' 'r2dvar' 1.0d0 'Zo_wbl' ! Input/Output 'wave bottom boundary layer roughness length' 'meter' ! [m] 'Zo_wbl, scalar, series' 'ocean_time' 'idBott(izwbl)' 'r2dvar' 1.0d0 'active_layer_thickness' ! Input/Output 'active layer thickness' 'meter' ! [m] 'active_layer_thickness, scalar, series' 'ocean_time' 'idBott(iactv)' 'r2dvar' 1.0d0 'cohesive_behavior' ! Output 'cohesive behavior' '1' ! [] 'cohesive_behavior, scalar, series' 'ocean_time' 'idBott(idprp)' 'r2dvar' 1.0d0 'saltation' ! Input/Output 'bottom saltation height' 'meter' ! [m] 'saltation, scalar, series' 'ocean_time' 'idBott(ishgt)' 'r2dvar' 1.0d0 'dmix_offset' ! Input/Output 'dmix erodibility profile offset' 'meter' ! [m] 'dmix_offset, scalar, series' 'ocean_time' 'idBott(idoff)' 'r2dvar' 1.0d0 'dmix_slope' ! Input/Output 'dmix erodibility profile slope' '_' ! [_] 'dmix_slope, scalar, series' 'ocean_time' 'idBott(idslp)' 'r2dvar' 1.0d0 'dmix_time' ! Input/Output 'dmix erodibility profile time scale' 'seconds' ! [s] 'dmix_time, scalar, series' 'ocean_time' 'idBott(idtim)' 'r2dvar' 1.0d0 'tau_crit_slope_c' ! Input/Output 'tau_crit_slope_c' 'N/m2' ! [N/m2] 'tau_crit_slope_c, scalar, series' 'ocean_time' 'idBott(itcsc)' 'r2dvar' 1.0d0 'tau_crit_offset_c' ! Input/Output 'tau_crit_offset_c' 'N/m2' ! [N/m2] 'tau_crit_offset_c, scalar, series' 'ocean_time' 'idBott(itcoc)' 'r2dvar' 1.0d0 'tau_crit_rtime' ! Input/Output 'tau_crit_rtime' 's' ! [s] 'tau_crit_rtime, scalar, series' 'ocean_time' 'idBott(itcrt)' 'r2dvar' 1.0d0 'Db_max' ! Input/Output 'Db_max' '?' ! [?] 'Db_max, scalar, series' 'ocean_time' 'idBott(idbmx)' 'r2dvar' 1.0d0 'Db_mm' ! Input/Output 'Db_mm' '?' ! [?] 'Db_mm, scalar, series' 'ocean_time' 'idBott(idbmm)' 'r2dvar' 1.0d0 'Db_zs' ! Input/Output 'Db_zs' '?' ! [?] 'Db_zs, scalar, series' 'ocean_time' 'idBott(idbzs)' 'r2dvar' 1.0d0 'Db_zm' ! Input/Output 'Db_zm' '?' ! [?] 'Db_zm, scalar, series' 'ocean_time' 'idBott(idbzm)' 'r2dvar' 1.0d0 'Db_zphi' ! Input/Output 'Db_zphi' '?' ! [?] 'Db_zphi, scalar, series' 'ocean_time' 'idBott(idbzp)' 'r2dvar' 1.0d0 ! !--------------------------------------------------------------------- ! Define names of variables associated with Fennel et al (2006), ! NEMURO, NPZD or Hypoxia ecosystem models. !--------------------------------------------------------------------- ! 'NO3' ! Input/Output 'nitrate concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NO3, scalar, series' 'ocean_time' 'idTvar(iNO3_)' 'r3dvar' 1.0d0 'NO3' ! Input 'nitrate concentration functional' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NO3, scalar, series' 'ocean_time' 'idTads(iNO3_)' 'r3dvar' 1.0d0 'NH4' ! Input/Output 'ammonium concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NH4, scalar, series' 'ocean_time' 'idTvar(iNH4_)' 'r3dvar' 1.0d0 'NH4' ! Input 'ammonium concentration functional' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NH4, scalar, series' 'ocean_time' 'idTads(iNH4_)' 'r3dvar' 1.0d0 'PON' ! Input/Output 'particulate organic nitrogen concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'PON, scalar, series' 'ocean_time' 'idTvar(iPON_)' 'r3dvar' 1.0d0 'DON' ! Input/Output 'dissolved organic nitrogen concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'DON, scalar, series' 'ocean_time' 'idTvar(iDON_)' 'r3dvar' 1.0d0 'SiOH4' ! Input/Output 'silicate concentration' 'millimole_silica meter-3' ! [millimole/m3] 'SiOH4, scalar, series' 'ocean_time' 'idTvar(iSiOH)' 'r3dvar' 1.0d0 'opal' ! Input/Output 'particulate organic silica concentration' 'millimole_silica meter-3' ! [millimole/m3] 'silica, scalar, series' 'ocean_time' 'idTvar(iopal)' 'r3dvar' 1.0d0 'iron' ! Input/Output 'available dissolved iron concentration' 'millimole_iron meter-3' ! [millimole/m3] 'iron, scalar, series' 'ocean_time' 'idTvar(iFdis)' 'r3dvar' 1.0d0 'iron' ! Input 'available dissolved iron concentration functional' 'millimole_iron meter-3' ! [millimole/m3] 'iron, scalar, series' 'ocean_time' 'idTads(iFdis)' 'r3dvar' 1.0d0 'phytoplankton' ! Input/Output 'phytoplankton concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'phytoplankton, scalar, series' 'ocean_time' 'idTvar(iPhyt)' 'r3dvar' 1.0d0 'phytoplankton' ! Input 'phytoplankton concentration functional' 'millimole_nitrogen meter-3' ! [millimole/m3] 'phytoplankton, scalar, series' 'ocean_time' 'idTads(iPhyt)' 'r3dvar' 1.0d0 'phytoplanktonFe' ! Input/Output 'phytoplankton, associated iron concentration' 'millimole_iron meter-3' ! [millimole/m3] 'phytoplanktonFe, scalar, series' 'ocean_time' 'idTvar(iFphy)' 'r3dvar' 1.0d0 'phytoplanktonFe' ! Input 'phytoplankton, associated iron concentration functional' 'millimole_iron meter-3' ! [millimole/m3] 'phytoplanktonFe, scalar, series' 'ocean_time' 'idTads(iFphy)' 'r3dvar' 1.0d0 'nanophytoplankton' ! Input/Output 'nanophytoplankton biomass' 'millimole_nitrogen meter-3' ! [millimole/m3] 'nanophytoplankton, scalar, series' 'ocean_time' 'idTvar(iSphy)' 'r3dvar' 1.0d0 'diatom' ! Input/Output 'diatom biomass' 'millimole_nitrogen meter-3' ! [millimole/m3] 'diatom, scalar, series' 'ocean_time' 'idTvar(iLphy)' 'r3dvar' 1.0d0 'zooplankton' ! Input/Output 'zooplankton concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'zooplankton, scalar, series' 'ocean_time' 'idTvar(iZoop)' 'r3dvar' 1.0d0 'zooplankton' ! Input 'zooplankton concentration functional' 'millimole_nitrogen meter-3' ! [millimole/m3] 'zooplankton, scalar, series' 'ocean_time' 'idTads(iZoop)' 'r3dvar' 1.0d0 'microzooplankton' ! Input/Output 'microzooplankton biomass' 'millimole_nitrogen meter-3' ! [millimole/m3] 'microzooplankton, scalar, series' 'ocean_time' 'idTvar(iSzoo)' 'r3dvar' 1.0d0 'mesozooplankton' ! Input/Output 'mesozooplankton biomass' 'millimole_nitrogen meter-3' ! [millimole/m3] 'mesozooplankton, scalar, series' 'ocean_time' 'idTvar(iLzoo)' 'r3dvar' 1.0d0 'Pzooplankton' ! Input/Output 'predator-zooplankton biomass' 'millimole_nitrogen meter-3' ! [millimole/m3] 'Pzooplankton, scalar, series' 'ocean_time' 'idTvar(iPzoo)' 'r3dvar' 1.0d0 'chlorophyll' ! Input/Output 'chlorophyll concentration' 'milligrams_chlorophyll meter-3' ! [milligrams/m3] 'chlorophyll, scalar, series' 'ocean_time' 'idTvar(iChlo)' 'r3dvar' 1.0d0 'chlorophyll' ! Input 'chlorophyll concentration functional' 'milligrams_chlorophyll meter-3' ! [milligrams/m3] 'chlorophyll, scalar, series' 'ocean_time' 'idTads(iChlo)' 'r3dvar' 1.0d0 'detritus' ! Input/Output 'detritus concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'detritus, scalar, series' 'ocean_time' 'idTvar(iSDet)' 'r3dvar' 1.0d0 'detritus' ! Input 'detritus concentration functional' 'millimole_nitrogen meter-3' ! [millimole/m3] 'detritus, scalar, series' 'ocean_time' 'idTads(iSDet)' 'r3dvar' 1.0d0 'LdetritusN' ! Input/Output 'large fraction nitrogen detritus concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'LdetritusN, scalar, series' 'ocean_time' 'idTvar(iLDeN)' 'r3dvar' 1.0d0 'LdetritusN' ! Input 'large fraction nitrogen detritus concentration functional' 'millimole_nitrogen meter-3' ! [millimole/m3] 'LdetritusN, scalar, series' 'ocean_time' 'idTads(iLDeN)' 'r3dvar' 1.0d0 'SdetritusN' ! Input/Output 'small fraction nitrogen detritus concentration' 'millimole_nitrogen meter-3' ! [millimole/m3] 'SdetritusN, scalar, series' 'ocean_time' 'idTvar(iSDeN)' 'r3dvar' 1.0d0 'SdetritusN' ! Input 'small fraction nitrogen detritus concentration functional' 'millimole_nitrogen meter-3' ! [millimole/m3] 'SdetritusN, scalar, series' 'ocean_time' 'idTads(iSDeN)' 'r3dvar' 1.0d0 'TIC' ! Input/Output 'total inorganic carbon' 'millimole_carbon meter-3' ! [millimole/m3] 'TIC, scalar, series' 'ocean_time' 'idTvar(iTIC_)' 'r3dvar' 1.0d0 'TIC' ! Input 'total inorganic carbon functional' 'millimole_carbon meter-3' ! [millimole/m3] 'TIC, scalar, series' 'ocean_time' 'idTads(iTIC_)' 'r3dvar' 1.0d0 'alkalinity' ! Input/Output 'total alkalinity' 'milliequivalents meter-3' ! [milliequivalents/m3] 'alkalinity, scalar, series' 'ocean_time' 'idTvar(iTAlk)' 'r3dvar' 1.0d0 'alkalinity' ! Input 'total alkalinity functional' 'milliequivalents meter-3' ! [milliequivalents/m3] 'alkalinity, scalar, series' 'ocean_time' 'idTads(iTAlk)' 'r3dvar' 1.0d0 'LdetritusC' ! Input/Output 'large fraction carbon detritus concentration' 'millimole_carbon meter-3' ! [millimole/m3] 'LdetritusC, scalar, series' 'ocean_time' 'idTvar(iLDeC)' 'r3dvar' 1.0d0 'LdetritusC' ! Input 'large fraction carbon detritus concentration functional' 'millimole_carbon meter-3' ! [millimole/m3] 'LdetritusC, scalar, series' 'ocean_time' 'idTads(iLDeC)' 'r3dvar' 1.0d0 'SdetritusC' ! Input/Output 'small fraction carbon detritus concentration' 'millimole_carbon meter-3' ! [millimole/m3] 'SdetritusC, scalar, series' 'ocean_time' 'idTvar(iSDeC)' 'r3dvar' 1.0d0 'SdetritusC' ! Input 'small fraction carbon detritus concentration functional' 'millimole_carbon meter-3' ! [millimole/m3] 'SdetritusC, scalar, series' 'ocean_time' 'idTads(iSDeC)' 'r3dvar' 1.0d0 'oxygen' ! Input/Output 'dissolved oxygen concentration' 'millimole_oxygen meter-3' ! [millimole/m3] 'Oxygen, scalar, series' 'ocean_time' 'idTvar(iOxyg)' 'r3dvar' 1.0d0 'oxygen' ! Input 'dissolved oxygen concentration functional' 'millimole_oxygen meter-3' ! [millimole/m3] 'Oxygen, scalar, series' 'ocean_time' 'idTads(iOxyg)' 'r3dvar' 1.0d0 'respiration' ! Input 'total respiration rate' 'millimole_oxygen meter-3 day-1' ! [millimoe/m3/day] 'respiration, scalar, series' 'respiration_time' 'idResR' 'r3dvar' 1.0d0 ! ! Diagnostic variables. ! 'CO2_airsea' ! Input/Output 'CO2 air-sea flux' 'millimole_carbon meter-2 day-1' ! [millimole/m2/day] 'CO2_airsea, scalar, series' 'ocean_time' 'iDbio2(iCOfx)' 'r2dvar' 1.0d0 'denitrification' ! Input/Output 'denitrification' 'millimole_nitrogen meter-2 day-1' ! [millimole/m2/day] 'denitrification, scalar, series' 'ocean_time' 'iDbio2(iDNIT)' 'r2dvar' 1.0d0 'pCO2' ! Input/Output 'partial pressure of CO2' 'microatmophere' ! [microatmosphere] 'pCO2, scalar, series' 'ocean_time' 'iDbio2(ipCO2)' 'r2dvar' 1.0d0 'O2_airsea' ! Input/Output 'O2 air-sea flux' 'millimole_oxygen meter-2 day-1' ! [millimole/m2/day] 'O2_airsea, scalar, series' 'ocean_time' 'iDbio2(iO2fx)' 'r2dvar' 1.0d0 'P_Production' ! Input/Output 'primary production' 'millimole_nitrogen meter-3 day-1' ! [millimole/m3/day] 'P_Production, scalar, series' 'ocean_time' 'iDbio3(iPPro)' 'r3dvar' 1.0d0 'NO3_uptake' ! Input/Output 'NO3 uptake' 'millimole_nitrogen meter-3 day-1' ! [millimole/m3/day] 'NO3_uptake, scalar, series' 'ocean_time' 'iDbio3(iNO3u)' 'r3dvar' 1.0d0 ! ! Boundary variables. ! 'NO3_east' ! Input 'nitrate eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NO3_east, scalar, series' 'NO3_time' 'idTbry(ieast,iNO3_)' 'nulvar' 1.0d0 'NO3_west' ! Input 'nitrate western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NO3_west, scalar, series' 'NO3_time' 'idTbry(iwest,iNO3_)' 'nulvar' 1.0d0 'NO3_south' ! Input 'nitrate southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NO3_south, scalar, series' 'NO3_time' 'idTbry(isouth,iNO3_)' 'nulvar' 1.0d0 'NO3_north' ! Input 'nitrate northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NO3_north, scalar, series' 'NO3_time' 'idTbry(inorth,iNO3_)' 'nulvar' 1.0d0 'TIC_east' ! Input 'TIC eastern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'TIC_east, scalar, series' 'TIC_time' 'idTbry(ieast,iTIC_)' 'nulvar' 1.0d0 'TIC_west' ! Input 'TIC western boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'TIC_west, scalar, series' 'TIC_time' 'idTbry(iwest,iTIC_)' 'nulvar' 1.0d0 'TIC_north' ! Input 'TIC northern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'TIC_north, scalar, series' 'TIC_time' 'idTbry(inorth,iTIC_)' 'nulvar' 1.0d0 'TIC_south' ! Input 'TIC southern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'TIC_south, scalar, series' 'TIC_time' 'idTbry(isouth,iTIC_)' 'nulvar' 1.0d0 'oxygen_east' ! Input 'oxygen eastern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'oxygen_east, scalar, series' 'oxygen_time' 'idTbry(ieast,iOxyg)' 'nulvar' 1.0d0 'oxygen_west' ! Input 'oxygen western boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'oxygen_west, scalar, series' 'oxygen_time' 'idTbry(iwest,iOxyg)' 'nulvar' 1.0d0 'oxygen_north' ! Input 'oxygen northern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'oxygen_north, scalar, series' 'oxygen_time' 'idTbry(inorth,iOxyg)' 'nulvar' 1.0d0 'oxygen_south' ! Input 'oxygen southern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'oxygen_south, scalar, series' 'oxygen_time' 'idTbry(isouth,iOxyg)' 'nulvar' 1.0d0 'alkalinity_east' ! Input 'alkalinity eastern boundary condition' 'milliequivalents meter-3' ! [milliequivalents/m3] 'alkalinity_east, scalar, series' 'alkalinity_time' 'idTbry(ieast,iTAlk)' 'nulvar' 1.0d0 'alkalinity_west' ! Input 'alkalinity western boundary condition' 'milliequivalents meter-3' ! [milliequivalents/m3] 'alkalinity_west, scalar, series' 'alkalinity_time' 'idTbry(iwest,iTAlk)' 'nulvar' 1.0d0 'alkalinity_north' ! Input 'alkalinity northern boundary condition' 'milliequivalents meter-3' ! [milliequivalents/m3] 'alkalinity_north, scalar, series' 'alkalinity_time' 'idTbry(inorth,iTAlk)' 'nulvar' 1.0d0 'alkalinity_south' ! Input 'alkalinity southern boundary condition' 'milliequivalents meter-3' ! [milliequivalents/m3] 'alkalinity_south, scalar, series' 'alkalinity_time' 'idTbry(isouth,iTAlk)' 'nulvar' 1.0d0 'NH4_east' ! Input 'ammonium eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NH4_east, scalar, series' 'NH4_time' 'idTbry(ieast,iNH4_)' 'nulvar' 1.0d0 'NH4_west' ! Input 'ammonium western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NH4_west, scalar, series' 'NH4_time' 'idTbry(iwest,iNH4_)' 'nulvar' 1.0d0 'NH4_south' ! Input 'ammonium southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NH4_south, scalar, series' 'NH4_time' 'idTbry(isouth,iNH4_)' 'nulvar' 1.0d0 'NH4_north' ! Input 'ammonium northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'NH4_north, scalar, series' 'NH4_time' 'idTbry(inorth,iNH4_)' 'nulvar' 1.0d0 'DON_east' ! Input 'dissolved organic nitrogen eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'DON_east, scalar, series' 'DON_time' 'idTbry(ieast,iDON_)' 'nulvar' 1.0d0 'DON_west' ! Input 'dissolved organic nitrogen western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'DON_west, scalar, series' 'DON_time' 'idTbry(iwest,iDON_)' 'nulvar' 1.0d0 'DON_south' ! Input 'dissolved organic nitrogen southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'DON_south, scalar, series' 'DON_time' 'idTbry(isouth,iDON_)' 'nulvar' 1.0d0 'DON_north' ! Input 'dissolved organic nitrogen northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'DON_north, scalar, series' 'DON_time' 'idTbry(inorth,iDON_)' 'nulvar' 1.0d0 'PON_east' ! Input 'particulate organic nitrogen eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'PON_east, scalar, series' 'PON_time' 'idTbry(ieast,iPON_)' 'nulvar' 1.0d0 'PON_west' ! Input 'particulate organic nitrogen western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'PON_west, scalar, series' 'PON_time' 'idTbry(iwest,iPON_)' 'nulvar' 1.0d0 'PON_south' ! Input 'particulate organic nitrogen southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'PON_south, scalar, series' 'PON_time' 'idTbry(isouth,iPON_)' 'nulvar' 1.0d0 'PON_north' ! Input 'particulate organic nitrogen northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'PON_north, scalar, series' 'PON_time' 'idTbry(inorth,iPON_)' 'nulvar' 1.0d0 'SiOH4_east' ! Input 'silicate eastern boundary condition' 'millimole_silica meter-3' ! [millimole/m3] 'SiOH4_east, scalar, series' 'SiOH4_time' 'idTbry(ieast,iSiOH)' 'nulvar' 1.0d0 'SiOH4_west' ! Input 'silicate western boundary condition' 'millimole_silica meter-3' ! [millimole/m3] 'SiOH4_west, scalar, series' 'SiOH4_time' 'idTbry(iwest,iSiOH)' 'nulvar' 1.0d0 'SiOH4_south' ! Input 'silicate southern boundary condition' 'millimole_silica meter-3' ! [millimole/m3] 'SiOH4_south, scalar, series' 'SiOH4_time' 'idTbry(isouth,iSiOH)' 'nulvar' 1.0d0 'SiOH4_north' ! Input 'silicate northern boundary condition' 'millimole_silica meter-3' ! [millimole/m3] 'SiOH4_north, scalar, series' 'SiOH4_time' 'idTbry(inorth,iSiOH)' 'nulvar' 1.0d0 'opal_east' ! Input 'particulate organic silica eastern boundary condition' 'millimole_silica meter-3' ! [millimole/m3] 'opal_east, scalar, series' 'opal_time' 'idTbry(ieast,iopal)' 'nulvar' 1.0d0 'opal_west' ! Input 'particulate organic silica western boundary condition' 'millimole_silica meter-3' ! [millimole/m3] 'opal_west, scalar, series' 'opal_time' 'idTbry(iwest,iopal)' 'nulvar' 1.0d0 'opal_south' ! Input 'particulate organic silica southern boundary condition' 'millimole_silica meter-3' ! [millimole/m3] 'opal_south, scalar, series' 'opal_time' 'idTbry(isouth,iopal)' 'nulvar' 1.0d0 'opal_north' ! Input 'particulate organic silica northern boundary condition' 'millimole_silica meter-3' ! [millimole/m3] 'opal_north, scalar, series' 'opal_time' 'idTbry(inorth,iopal)' 'nulvar' 1.0d0 'iron_east' ! Input 'dissolved iron eastern boundary condition' 'millimole_iron meter-3' ! [millimole/m3] 'iron_east, scalar, series' 'iron_time' 'idTbry(ieast,iFdis)' 'nulvar' 1.0d0 'iron_west' ! Input 'dissolved iron western boundary condition' 'millimole_iron meter-3' ! [millimole/m3] 'iron_west, scalar, series' 'iron_time' 'idTbry(iwest,iFdis)' 'nulvar' 1.0d0 'iron_north' ! Input 'dissolved iron northern boundary condition' 'millimole_iron meter-3' ! [millimole/m3] 'iron_north, scalar, series' 'iron_time' 'idTbry(inorth,iFdis)' 'nulvar' 1.0d0 'iron_south' ! Input 'dissolved iron southern boundary condition' 'millimole_iron meter-3' ! [millimole/m3] 'iron_south, scalar, series' 'iron_time' 'idTbry(isouth,iFdis)' 'nulvar' 1.0d0 'phyt_east' ! Input 'phytoplankton eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'phyt_east, scalar, series' 'phyt_time' 'idTbry(ieast,iPhyt)' 'nulvar' 1.0d0 'phyt_west' ! Input 'phytoplankton western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'phyt_west, scalar, series' 'phyt_time' 'idTbry(iwest,iPhyt)' 'nulvar' 1.0d0 'phyt_south' ! Input 'phytoplankton southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'phyt_south, scalar, series' 'phyt_time' 'idTbry(isouth,iPhyt)' 'nulvar' 1.0d0 'phyt_north' ! Input 'phytoplankton northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'phyt_north, scalar, series' 'phyt_time' 'idTbry(inorth,iPhyt)' 'nulvar' 1.0d0 'phytFe_east' ! Input 'phytoplankton, iron concentration eastern boundary condition' 'millimole_iron meter-3' ! [millimole/m3] 'phytFe_east, scalar, series' 'phytFe_time' 'idTbry(ieast,iFdis)' 'nulvar' 1.0d0 'phytFe_west' ! Input 'phytoplankton, iron concentration western boundary condition' 'millimole_iron meter-3' ! [millimole/m3] 'phytFe_west, scalar, series' 'phytFe_time' 'idTbry(iwest,iFphy)' 'nulvar' 1.0d0 'phytFe_north' ! Input 'phytoplankton, iron concentration northern boundary condition' 'millimole_iron meter-3' ! [millimole/m3] 'phytFe_north, scalar, series' 'phytFe_time' 'idTbry(inorth,iFphy)' 'nulvar' 1.0d0 'phytFe_south' ! Input 'phytoplankton, iron concentration southern boundary condition' 'millimole_iron meter-3' ! [millimole/m3] 'phytFe_south, scalar, series' 'phytFe_time' 'idTbry(isouth,iFphy)' 'nulvar' 1.0d0 'nanophy_east' ! Input 'nanophytoplankton eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'nanophy_east, scalar, series' 'nanophy_time' 'idTbry(ieast,iSphy)' 'nulvar' 1.0d0 'nanophy_west' ! Input 'nanophytoplankton western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'nanophy_west, scalar, series' 'nanophy_time' 'idTbry(iwest,iSphy)' 'nulvar' 1.0d0 'nanophy_south' ! Input 'nanophytoplankton southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'nanophy_south, scalar, series' 'nanophy_time' 'idTbry(isouth,iSphy)' 'nulvar' 1.0d0 'nanophy_north' ! Input 'nanophytoplankton northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'nanophy_north, scalar, series' 'nanophy_time' 'idTbry(inorth,iSphy)' 'nulvar' 1.0d0 'diatom_east' ! Input 'diatom eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'diatom_east, scalar, series' 'diatom_time' 'idTbry(ieast,iLphy)' 'nulvar' 1.0d0 'diatom_west' ! Input 'diatom western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'diatom_west, scalar, series' 'diatom_time' 'idTbry(iwest,iLphy)' 'nulvar' 1.0d0 'diatom_south' ! Input 'diatom southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'diatom_south, scalar, series' 'diatom_time' 'idTbry(isouth,iLphy)' 'nulvar' 1.0d0 'diatom_north' ! Input 'diatom northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'diatom_north, scalar, series' 'diatom_time' 'idTbry(inorth,iLphy)' 'nulvar' 1.0d0 'zoop_east' ! Input 'zooplankton eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'zoop_east, scalar, series' 'zoop_time' 'idTbry(ieast,iZoop)' 'nulvar' 1.0d0 'zoop_west' ! Input 'zooplankton western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'zoop_west, scalar, series' 'zoop_time' 'idTbry(iwest,iZoop)' 'nulvar' 1.0d0 'zoop_south' ! Input 'zooplankton southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'zoop_south, scalar, series' 'zoop_time' 'idTbry(isouth,iZoop)' 'nulvar' 1.0d0 'zoop_north' ! Input 'zooplankton northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'zoop_north, scalar, series' 'zoop_time' 'idTbry(inorth,iZoop)' 'nulvar' 1.0d0 'microzoo_east' ! Input 'microzooplankton eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'microzoo_east, scalar, series' 'microzoo_time' 'idTbry(ieast,iSzoo)' 'nulvar' 1.0d0 'microzoo_west' ! Input 'microzooplankton western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'microzoo_west, scalar, series' 'microzoo_time' 'idTbry(iwest,iSzoo)' 'nulvar' 1.0d0 'microzoo_south' ! Input 'microzooplankton southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'microzoo_south, scalar, series' 'microzoo_time' 'idTbry(isouth,iSzoo)' 'nulvar' 1.0d0 'microzoo_north' ! Input 'microzooplankton northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'microzoo_north, scalar, series' 'microzoo_time' 'idTbry(inorth,iSzoo)' 'nulvar' 1.0d0 'mesozoo_east' ! Input 'mesozooplankton eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'mesozoo_east, scalar, series' 'mesozoo_time' 'idTbry(ieast,iLzoo)' 'nulvar' 1.0d0 'mesozoo_west' ! Input 'mesozooplankton western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'mesozoo_west, scalar, series' 'mesozoo_time' 'idTbry(iwest,iLzoo)' 'nulvar' 1.0d0 'mesozoo_south' ! Input 'mesozooplankton southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'mesozoo_south, scalar, series' 'mesozoo_time' 'idTbry(isouth,iLzoo)' 'nulvar' 1.0d0 'mesozoo_north' ! Input 'mesozooplankton northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'mesozoo_north, scalar, series' 'mesozoo_time' 'idTbry(inorth,iLzoo)' 'nulvar' 1.0d0 'Pzoo_east' ! Input 'predator-zooplankton eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'Pzoo_east, scalar, series' 'Pzoo_time' 'idTbry(ieast,iPzoo)' 'nulvar' 1.0d0 'Pzoo_west' ! Input 'predator-zooplankton western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'Pzoo_west, scalar, series' 'Pzoo_time' 'idTbry(iwest,iPzoo)' 'nulvar' 1.0d0 'Pzoo_south' ! Input 'predator-zooplankton southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'Pzoo_south, scalar, series' 'Pzoo_time' 'idTbry(isouth,iPzoo)' 'nulvar' 1.0d0 'Pzoo_north' ! Input 'predator-zooplankton northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'Pzoo_north, scalar, series' 'Pzoo_time' 'idTbry(inorth,iPzoo)' 'nulvar' 1.0d0 'chlo_east' ! Input 'chlorophyll eastern boundary condition' 'milligram meter-3' ! [milligram/m3] 'chlo_east, scalar, series' 'chlo_time' 'idTbry(ieast,iChlo)' 'nulvar' 1.0d0 'chlo_west' ! Input 'chlorophyll western boundary condition' 'milligram meter-3' ! [milligram/m3] 'chlo_west, scalar, series' 'chlo_time' 'idTbry(iwest,iChlo)' 'nulvar' 1.0d0 'chlo_south' ! Input 'chlorophyll southern boundary condition' 'milligram meter-3' ! [milligram/m3] 'chlo_south, scalar, series' 'chlo_time' 'idTbry(isouth,iChlo)' 'nulvar' 1.0d0 'chlo_north' ! Input 'chlorophyll northern boundary condition' 'milligram meter-3' ! [milligram/m3] 'chlo_north, scalar, series' 'chlo_time' 'idTbry(inorth,iChlo)' 'nulvar' 1.0d0 'detritus_east' ! Input 'detritus eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'detritus_east, scalar, series' 'detritus_time' 'idTbry(ieast,iSDet)' 'nulvar' 1.0d0 'detritus_west' ! Input 'detritus western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'detritus_west, scalar, series' 'detritus_time' 'idTbry(iwest,iSDet)' 'nulvar' 1.0d0 'detritus_south' ! Input 'detritus southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'detritus_south, scalar, series' 'detritus_time' 'idTbry(isouth,iSDet)' 'nulvar' 1.0d0 'detritus_north' ! Input 'detritus northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'detritus_north, scalar, series' 'detritus_time' 'idTbry(inorth,iSDet)' 'nulvar' 1.0d0 'LDeN_east' ! Input 'large fraction nitrogen detritus eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'LDeN_east, scalar, series' 'LDeN_time' 'idTbry(ieast,iLDeN)' 'nulvar' 1.0d0 'LDeN_west' ! Input 'large fraction nitrogen detritus western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'LDeN_west, scalar, series' 'LDeN_time' 'idTbry(iwest,iLDeN)' 'nulvar' 1.0d0 'LDeN_south' ! Input 'large fraction nitrogen detritus southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'LDeN_south, scalar, series' 'LDeN_time' 'idTbry(isouth,iLDeN)' 'nulvar' 1.0d0 'LDeN_north' ! Input 'large fraction nitrogen detritus northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'LDeN_north, scalar, series' 'LDeN_time' 'idTbry(inorth,iLDeN)' 'nulvar' 1.0d0 'SDeN_east' ! Input 'small fraction nitrogen detritus eastern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'SDeN_east, scalar, series' 'SDeN_time' 'idTbry(ieast,iSDeN)' 'nulvar' 1.0d0 'SDeN_west' ! Input 'small fraction nitrogen detritus western boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'SDeN_west, scalar, series' 'SDeN_time' 'idTbry(iwest,iSDeN)' 'nulvar' 1.0d0 'SDeN_north' ! Input 'small fraction nitrogen detritus northern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'SDeN_north, scalar, series' 'SDeN_time' 'idTbry(inorth,iSDeN)' 'nulvar' 1.0d0 'SDeN_south' ! Input 'small fraction nitrogen detritus southern boundary condition' 'millimole_nitrogen meter-3' ! [millimole/m3] 'SDeN_south, scalar, series' 'SDeN_time' 'idTbry(isouth,iSDeN)' 'nulvar' 1.0d0 'LdeC_east' ! Input 'large fraction carbon detritus eastern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'LdeC_east, scalar, series' 'LdeC_time' 'idTbry(ieast,iLDeC)' 'nulvar' 1.0d0 'LdeC_west' ! Input 'large fraction carbon detritus western boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'LdeC_west, scalar, series' 'LdeC_time' 'idTbry(iwest,iLDeC)' 'nulvar' 1.0d0 'LdeC_south' ! Input 'large fraction carbon detritus southern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'LdeC_south, scalar, series' 'LdeC_time' 'idTbry(isouth,iLDeC)' 'nulvar' 1.0d0 'LdeC_north' ! Input 'large fraction carbon detritus northern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'LdeC_north, scalar, series' 'LdeC_time' 'idTbry(inorth,iLDeC)' 'nulvar' 1.0d0 'SdeC_east' ! Input 'small fraction carbon detritus eastern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'SdeC_east, scalar, series' 'SdeC_time' 'idTbry(ieast,iSDeC)' 'nulvar' 1.0d0 'SdeC_west' ! Input 'small fraction carbon detritus western boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'SdeC_west, scalar, series' 'SdeC_time' 'idTbry(iwest,iSDeC)' 'nulvar' 1.0d0 'SdeC_south' ! Input 'small fraction carbon detritus southern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'SdeC_south, scalar, series' 'SdeC_time' 'idTbry(isouth,iSDeC)' 'nulvar' 1.0d0 'SdeC_north' ! Input 'small fraction carbon detritus northern boundary condition' 'millimole_carbon meter-3' ! [millimole/m3] 'SdeC_north, scalar, series' 'SdeC_time' 'idTbry(inorth,iSDeC)' 'nulvar' 1.0d0 ! !----------------------------------------------------------------------- ! Define names of variables associated with Red Tide module. !----------------------------------------------------------------------- ! 'dinoflagellate' ! Input/Output 'red tide dinoflagellate concentration' 'cell meter-3' ! [cell/m3] 'dinoflagellate, scalar, series' 'ocean_time' 'idTvar(iDino)' 'r3dvar' 1.0d0 'cyst_bottom' ! Input 'red tide dinoflagellate bottom cyst concentration' 'cell meter-2' ! [cell/m2] 'cyst_bottom, scalar, series' 'cyst_time' 'idCyst' 'r2dvar' 1.0d0 'swrad_avg' ! Input/Output 'averaged solar shortwave radiation flux' 'watt meter-2' ! Input: [Watt/m2] 'averaged shortwave radiation, scalar, series' ! [Celsius m/s] 'srf_time' ! Output: [Watt/m2] 'idAsrf' 'r2dvar' 1.0d0 'DIN_obs' ! Input 'observed dissolved inorganic nutrient' 'millimole meter-3' ! [millimole/m3] 'DIN_obs, scalar, series' 'DIN_time' 'idODIN' 'r3dvar' 1.0d0 ! ! Boundary variables. ! 'dinoflagellate_east' ! Input 'red tide dinoflagellate eastern boundary condition' 'cells meter-3' ! [cell/m3] 'dinoflagellate_east, scalar, series' 'dinoflagellate_time' 'idTbry(ieast,iDino)' 'nulvar' 1.0d0 'dinoflagellate_west' ! Input 'red tide dinoflagellate western boundary condition' 'cells meter-3' ! [cell/m3] 'dinoflagellate_west, scalar, series' 'dinoflagellate_time' 'idTbry(iwest,iDino)' 'nulvar' 1.0d0 'dinoflagellate_south' ! Input 'red tide dinoflagellate southern boundary condition' 'cells meter-3' ! [cell/m3] 'dinoflagellate_south, scalar, series' 'dinoflagellate_time' 'idTbry(isouth,iDino)' 'nulvar' 1.0d0 'dinoflagellate_north' ! Input 'red tide dinoflagellate northern boundary condition' 'cells meter-3' ! [cell/m3] 'dinoflagellate_north, scalar, series' 'dinoflagellate_time' 'idTbry(inorth,iDino)' 'nulvar' 1.0d0 ! !----------------------------------------------------------------------- ! Define names of variables associated with EcoSim bio-optical module. !----------------------------------------------------------------------- ! 'NO3' ! Input/Output 'nitrate concentration' 'millimole_N03 meter-3' ! [millimole/m3] 'NO3, scalar, series' 'ocean_time' 'idTvar(iNO3_)' 'r3dvar' 1.0d0 'NH4' ! Input/Output 'ammonium concentration' 'millimole_NH4 meter-3' ! [millimole/m3] 'NH4, scalar, series' 'ocean_time' 'idTvar(iNH4_)' 'r3dvar' 1.0d0 'PO4' ! Input/Output 'phosphate concentration' 'millimole_PO4 meter-3' ! [millimole/m3] 'PO4, scalar, series' 'ocean_time' 'idTvar(iPO4_)' 'r3dvar' 1.0d0 'FeO' ! Input/Output 'iron concentration' 'millimole_FeO meter-3' ! [millimole/m3] 'FeO, scalar, series' 'ocean_time' 'idTvar(iFeO_)' 'r3dvar' 1.0d0 'SiO' ! Input/Output 'silica concentration' 'millimole_SiO meter-3' ! [millimole/m3] 'SiO, scalar, series' 'ocean_time' 'idTvar(iSiO_)' 'r3dvar' 1.0d0 'DIC' ! Input/Output 'DIC concentration' 'millimole_DIC meter-3' ! [millimole/m3] 'DIC concentration, scalar, series' 'ocean_time' 'idTvar(iDIC_)' 'r3dvar' 1.0d0 'Bac_C' ! Input/Output 'bacteria, carbon group' 'millimole_C meter-3' ! [millimole/m3] 'Bac_C, scalar, series' 'ocean_time' 'idTvar(iBacC)' 'r3dvar' 1.0d0 'Bac_F' ! Input/Output 'bacteria, iron Group' 'millimole_Fe meter-3' ! [millimole/m3] 'Bac_F, scalar, series' 'ocean_time' 'idTvar(iBacF)' 'r3dvar' 1.0d0 'Bac_N' ! Input/Output 'bacteria, nitrogen group' 'millimole_N meter-3' ! [millimole/m3] 'Bac_N, scalar, series' 'ocean_time' 'idTvar(iBacN)' 'r3dvar' 1.0d0 'Bac_P' ! Input/Output 'bacteria, phosphorus group' 'millimole_P meter-3' ! [millimole/m3] 'Bac_P, scalar, series' 'ocean_time' 'idTvar(iBacP)' 'r3dvar' 1.0d0 'CDM_C' ! Input/Output 'color degradational matter' 'millimole_CDMC meter-3' ! [millimole/m3] 'CDM_C, scalar, series' 'ocean_time' 'idTvar(iCDMC)' 'r3dvar' 1.0d0 'DOM_C' ! Input/Output 'dissolved organic matter, carbon group' 'millimole_C meter-3' ! [millimole/m3] 'DOM_C, scalar, series' 'ocean_time' 'idTvar(iDOMC)' 'r3dvar' 1.0d0 'DOM_N' ! Input/Output 'dissolved organic matter, nitrogen group' 'millimole_N meter-3' ! [millimole/m3] 'DOM_N, scalar, series' 'ocean_time' 'idTvar(iDOMN)' 'r3dvar' 1.0d0 'DOM_P' ! Input/Output 'dissolved organic matter,) phosphorus group' 'millimole_P meter-3' ! [millimole/m3] 'DOM_P, scalar, series' 'ocean_time' 'idTvar(iDOMP)' 'r3dvar' 1.0d0 'Fec_C' ! Input/Output 'fecal matter, carbon group' 'millimole_C meter-3' ! [millimole/m3] 'Fec_C, scalar, series' 'ocean_time' 'idTvar(iFecC)' 'r3dvar' 1.0d0 'Fec_F' ! Input/Output 'fecal matter, iron group' 'millimole_Fe meter-3' ! [millimole/m3] 'Fec_F, scalar, series' 'ocean_time' 'idTvar(iFecF)' 'r3dvar' 1.0d0 'Fec_N' ! Input/Output 'fecal matter, nitrogen group' 'millimole_N meter-3' ! [millimole/m3] 'Fec_N, scalar, series' 'ocean_time' 'idTvar(iFecN)' 'r3dvar' 1.0d0 'Fec_P' ! Input/Output 'fecal matter, phosphorus group' 'millimole_P meter-3' ! [millimole/m3] 'Fec_P, scalar, series' 'ocean_time' 'idTvar(iFecP)' 'r3dvar' 1.0d0 'Fec_S' ! Input/Output 'fecal matter, silica group' 'millimole_SiO meter-3' ! [millimole/m3] 'Fec_S, scalar, series' 'ocean_time' 'idTvar(iFecS)' 'r3dvar' 1.0d0 'Phy_C' ! Input/Output 'phytoplankton, carbon group' 'millimole_C meter-3' ! [millimole/m3] 'Phy_C, scalar, series' 'ocean_time' 'idTvar(iPhyC)' 'r3dvar' 1.0d0 'Phy_F' ! Input/Output 'phytoplankton, iron group' 'millimole_Fe meter-3' ! [millimole/m3] 'Phy_F, scalar, series' 'ocean_time' 'idTvar(iPhyF)' 'r3dvar' 1.0d0 'Phy_N' ! Input/Output 'phytoplankton, nitrogen group' 'millimole_N meter-3' ! [millimole/m3] 'Phy_N, scalar, series' 'ocean_time' 'idTvar(iPhyN)' 'r3dvar' 1.0d0 'Phy_P' ! Input/Output 'phytoplankton, phosphorus group' 'millimole_P meter-3' ! [millimole/m3] 'Phy_P, scalar, series' 'ocean_time' 'idTvar(iPhyP)' 'r3dvar' 1.0d0 'Phy_S' ! Input/Output 'phytoplankton, silica group' 'millimole_SiO meter-3' ! [millimole/m3] 'Phy_S, scalar, series' 'ocean_time' 'idTvar(iPhyS)' 'r3dvar' 1.0d0 'Pigs_XY' ! Input/Output 'Phytoplankton X, pigment Y' 'milligrams meter-3' ! [milligrams/m3] 'Pigs_XY, scalar, series' 'ocean_time' 'idTvar(iPigs)' 'r3dvar' 1.0d0 ! !----------------------------------------------------------------------- ! Define names of variables for time-averaged quadratic terms. !----------------------------------------------------------------------- ! 'zeta2' ! Output 'time-averaged squared free-surface' 'meter2' ! [m2] 'zeta2, scalar, series' 'ocean_time' 'idZZav' 'r2dvar' 1.0d0 'ubar2' ! Output 'time-averaged squared vertically integrated u-momentum' 'meter2 second-2' ! [m2/s2] 'ubar2, scalar, series' 'ocean_time' 'idU2av' 'u2dvar' 1.0d0 'vbar2' ! Output 'time-averaged squared vertically integrated v-momentum' 'meter2 second-2' ! [m2/s2] 'vbar2, scalar, series' 'ocean_time' 'idV2av' 'v2dvar' 1.0d0 'Huon' ! Output 'time-averaged u-volume flux' 'meter3 second-1' ! [m3/s] 'Huon, scalar, series' 'ocean_time' 'idHUav' 'u3dvar' 1.0d0 'Hvom' ! Output 'time-averaged v-volume flux' 'meter3 second-1' ! [m3/s] 'Hvom, scalar, series' 'ocean_time' 'idHVav' 'v3dvar' 1.0d0 'uu' ! Output 'time-averaged u-momentum times u-momentum' 'meter2 second-2' ! [m2/s2] 'uu, scalar, series' 'ocean_time' 'idUUav' 'u3dvar' 1.0d0 'uv' ! Output 'time-averaged u-momentum times v-momentum' 'meter2 second-2' ! [m2/s2] 'uv, scalar, series' 'ocean_time' 'idUVav' 'r3dvar' 1.0d0 'vv' ! Output 'time-averaged v-momentum times v-momentum' 'meter2 second-2' ! [m2/s2] 'uv, scalar, series' 'ocean_time' 'idVVav' 'v3dvar' 1.0d0 'tracer2' ! Output 'time-averaged squared tracer' 'tracer2' ! [tracer2] 'tracer2, scalar, series' 'ocean_time' 'idTTav(itrc)' 'r3dvar' 1.0d0 'Huontracer' ! Output 'time-averaged tracer u-volume flux' 'meter3 second-1 tracer' ! [m3/s tracer] 'Huontracer, scalar, series' 'ocean_time' 'iHUTav(itrc)' 'u3dvar' 1.0d0 'utracer' ! Output 'time-averaged u-momentum times tracer' 'meter second-1 tracer' ! [m/s tracer] 'utracer, scalar, series' 'ocean_time' 'idUTav(itrc)' 'u3dvar' 1.0d0 'Hvomtracer' ! Output 'time-averaged tracer v-volume flux' 'meter3 second-1 tracer' ! [m3/s tracer] 'Hvomtracer, scalar, series' 'ocean_time' 'iHVTav(itrc)' 'v3dvar' 1.0d0 'vtracer' ! Output 'time-averaged v-momentum times tracer' 'meter second-1 tracer' ! [m/s tracer] 'vtracer, scalar, series' 'ocean_time' 'idVTav(itrc)' 'v3dvar' 1.0d0 ! !----------------------------------------------------------------------- ! Define names of variables for diagnostic fields. !----------------------------------------------------------------------- ! ! 2D momentum diagnostic terms. ! 'pvorticity_bar' ! Input/Output '2D potential vorticity' 'meter-1 second-1' ! [1/m/s] 'pvorticity_bar, scalar, series' 'ocean_time' 'id2dPV' 'p2dvar' 1.0d0 'rvorticity_bar' ! Input/Output '2D relative vorticity' 'second-1' ! [1/s] 'rvorticity_bar, scalar, series' 'ocean_time' 'id2dRV' 'p2dvar' 1.0d0 'ubar_accel' ! Input/Output '2D u-momentum, acceleration term' 'meter second-2' ! [m/s2] 'ubar_accel, scalar, series' 'ocean_time' 'idDu2d(M2rate)' 'u2dvar' 1.0d0 'vbar_accel' ! Input/Output '2D v-momentum, acceleration term' 'meter second-2' ! [m/s2] 'vbar_accel, scalar, series' 'ocean_time' 'idDv2d(M2rate)' 'v2dvar' 1.0d0 'ubar_prsgrd' ! Input/Output '2D u-momentum, pressure gradient term' 'meter second-2' ! [m/s2] 'ubar_prsgrd, scalar, series' 'ocean_time' 'idDu2d(M2pgrd)' 'u2dvar' 1.0d0 'vbar_prsgrd' ! Input/Output '2D v-momentum, pressure gradient term' 'meter second-2' ! [m/s2] 'vbar_prsgrd, scalar, series' 'ocean_time' 'idDv2d(M2pgrd)' 'v2dvar' 1.0d0 'ubar_cor' ! Input/Output '2D u-momentum, Coriolis term' 'meter second-2' ! [m/s2] 'ubar_cor, scalar, series' 'ocean_time' 'idDu2d(M2fcor)' 'u2dvar' 1.0d0 'vbar_cor' ! Input/Output '2D v-momentum, Coriolis term' 'meter second-2' ! [m/s2] 'vbar_cor, scalar, series' 'ocean_time' 'idDv2d(M2fcor)' 'v2dvar' 1.0d0 'ubar_hadv' ! Input/Output '2D u-momentum, horizontal advection term' 'meter second-2' ! [m/s2] 'ubar_hadv, scalar, series' 'ocean_time' 'idDu2d(M2hadv)' 'u2dvar' 1.0d0 'ubar_xadv' ! Input/Output '2D u-momentum, horizontal XI-advection term' 'meter second-2' ! [m/s2] 'ubar_xadv, scalar, series' 'ocean_time' 'idDu2d(M2xadv)' 'u2dvar' 1.0d0 'ubar_yadv' ! Input/Output '2D u-momentum, horizontal ETA-advection term' 'meter second-2' ! [m/s2] 'ubar_yadv, scalar, series' 'ocean_time' 'idDu2d(M2yadv)' 'u2dvar' 1.0d0 'vbar_hadv' ! Input/Output '2D v-momentum, horizontal advection term' 'meter second-2' ! [m/s2] 'vbar_hadv, scalar, series' 'ocean_time' 'idDv2d(M2hadv)' 'v2dvar' 1.0d0 'vbar_xadv' ! Input/Output '2D v-momentum, horizontal XI-advection term' 'meter second-2' ! [m/s2] 'vbar_xadv, scalar, series' 'ocean_time' 'idDv2d(M2xadv)' 'v2dvar' 1.0d0 'vbar_yadv' ! Input/Output '2D v-momentum, horizontal ETA-advection term' 'meter second-2' ! [m/s2] 'vbar_yadv, scalar, series' 'ocean_time' 'idDv2d(M2yadv)' 'v2dvar' 1.0d0 'ubar_hrad' ! Input/Output '2D u-momentum, horizontal radiation stress term' 'meter second-2' ! [m/s2] 'ubar_hrad, scalar, series' 'ocean_time' 'idDu2d(M2hrad)' 'u2dvar' 1.0d0 'vbar_hrad' ! Input/Output '2D v-momentum, horizontal radiation stress term' 'meter second-2' ! [m/s2] 'vbar_hrad, scalar, series' 'ocean_time' 'idDv2d(M2hrad)' 'v2dvar' 1.0d0 'ubar_hvisc' ! Input/Output '2D u-momentum, horizontal viscosity term' 'meter second-2' ! [m/s2] 'ubar_hvisc, scalar, series' 'ocean_time' 'idDu2d(M2hvis)' 'u2dvar' 1.0d0 'ubar_xvisc' ! Input/Output '2D u-momentum, horizontal XI-viscosity term' 'meter second-2' ! [m/s2] 'ubar_xvisc, scalar, series' 'ocean_time' 'idDu2d(M2xvis)' 'u2dvar' 1.0d0 'ubar_yvisc' ! Input/Output '2D u-momentum, horizontal ETA-viscosity term' 'meter second-2' ! [m/s2] 'ubar_yvisc, scalar, series' 'ocean_time' 'idDu2d(M2yvis)' 'u2dvar' 1.0d0 'vbar_hvisc' ! Input/Output '2D v-momentum, horizontal viscosity term' 'meter second-2' ! [m/s2] 'vbar_hvisc, scalar, series' 'ocean_time' 'idDv2d(M2hvis)' 'v2dvar' 1.0d0 'vbar_xvisc' ! Input/Output '2D v-momentum, horizontal XI-viscosity term' 'meter second-2' ! [m/s2] 'vbar_xvisc, scalar, series' 'ocean_time' 'idDv2d(M2xvis)' 'v2dvar' 1.0d0 'vbar_yvisc' ! Input/Output '2D v-momentum, horizontal ETA-viscosity term' 'meter second-2' ! [m/s2] 'vbar_yvisc, scalar, series' 'ocean_time' 'idDv2d(M2yvis)' 'v2dvar' 1.0d0 'ubar_sstr' ! Input/Output '2D u-momentum, surface stress term' 'meter second-2' ! [m/s2] 'ubar_sstr, scalar, series' 'ocean_time' 'idDu2d(M2sstr)' 'u2dvar' 1.0d0 'ubar_bstr' ! Input/Output '2D u-momentum, bottom stress term' 'meter second-2' ! [m/s2] 'ubar_bstr, scalar, series' 'ocean_time' 'idDu2d(M2bstr)' 'u2dvar' 1.0d0 'vbar_sstr' ! Input/Output '2D v-momentum, surface stress term' 'meter second-2' ! [m/s2] 'vbar_sstr, scalar, series' 'ocean_time' 'idDv2d(M2sstr)' 'v2dvar' 1.0d0 'vbar_bstr' ! Input/Output '2D v-momentum, bottom stress term' 'meter second-2' ! [m/s2] 'vbar_bstr, scalar, series' 'ocean_time' 'idDv2d(M2bstr)' 'v2dvar' 1.0d0 ! ! 3D momentum diagnostic terms. ! 'pvorticity' ! Input/Output 'potential vorticity' 'meter-1 second-1' ! [1/m/s] 'pvorticity, scalar, series' 'ocean_time' 'id3dPV' 'p3dvar' 1.0d0 'rvorticity' ! Input/Output 'relative vorticity, vertical component' 'second-1' ! [1/s] 'rvorticity, scalar, series' 'ocean_time' 'id3dRV' 'p3dvar' 1.0d0 'u_accel' ! Input/Output '3D u-momentum, acceleration term' 'meter second-2' ! [m/s2] 'u_accel, scalar, series' 'ocean_time' 'idDu3d(M3rate)' 'u3dvar' 1.0d0 'v_accel' ! Input/Output '3D v-momentum, acceleration term' 'meter second-2' ! [m/s2] 'v_accel, scalar, series' 'ocean_time' 'idDv3d(M3rate)' 'v3dvar' 1.0d0 'u_prsgrd' ! Input/Output '3D u-momentum, pressure gradient term' 'meter second-2' ! [m/s2] 'u_prsgrd, scalar, series' 'ocean_time' 'idDu3d(M3pgrd)' 'u3dvar' 1.0d0 'v_prsgrd' ! Input/Output '3D v-momentum, pressure gradient term' 'meter second-2' ! [m/s2] 'v_prsgrd, scalar, series' 'ocean_time' 'idDv3d(M3pgrd)' 'v3dvar' 1.0d0 'u_cor' ! Input/Output '3D u-momentum, Coriolis term' 'meter second-2' ! [m/s2] 'u_cor, scalar, series' 'ocean_time' 'idDu3d(M3fcor)' 'u3dvar' 1.0d0 'v_cor' ! Input/Output '3D v-momentum, Coriolis term' 'meter second-2' ! [m/s2] 'v_cor, scalar, series' 'ocean_time' 'idDv3d(M3fcor)' 'v3dvar' 1.0d0 'u_hadv' ! Input/Output '3D u-momentum, horizontal advection term' 'meter second-2' ! [m/s2] 'u_hadv, scalar, series' 'ocean_time' 'idDu3d(M3hadv)' 'u3dvar' 1.0d0 'u_xadv' ! Input/Output '3D u-momentum, horizontal XI-advection term' 'meter second-2' ! [m/s2] 'u_xadv, scalar, series' 'ocean_time' 'idDu3d(M3xadv)' 'u3dvar' 1.0d0 'u_yadv' ! Input/Output '3D u-momentum, horizontal ETA-advection term' 'meter second-2' ! [m/s2] 'u_yadv, scalar, series' 'ocean_time' 'idDu3d(M3yadv)' 'u3dvar' 1.0d0 'v_hadv' ! Input/Output '3D v-momentum, horizontal advection term' 'meter second-2' ! [m/s2] 'v_hadv, scalar, series' 'ocean_time' 'idDv3d(M3hadv)' 'v3dvar' 1.0d0 'v_xadv' ! Input/Output '3D v-momentum, horizontal XI-advection term' 'meter second-2' ! [m/s2] 'v_xadv, scalar, series' 'ocean_time' 'idDv3d(M3xadv)' 'v3dvar' 1.0d0 'v_yadv' ! Input/Output '3D v-momentum, horizontal ETA-advection term' 'meter second-2' ! [m/s2] 'v_yadv, scalar, series' 'ocean_time' 'idDv3d(M3yadv)' 'v3dvar' 1.0d0 'u_vadv' ! Input/Output '3D u-momentum, vertical advection term' 'meter second-2' ! [m/s2] 'u_vadv, scalar, series' 'ocean_time' 'idDu3d(M3vadv)' 'u3dvar' 1.0d0 'v_vadv' ! Input/Output '3D v-momentum, vertical advection term' 'meter second-2' ! [m/2] 'v_vadv, scalar, series' 'ocean_time' 'idDv3d(M3vadv)' 'v3dvar' 1.0d0 'u_hrad' ! Input/Output '3D u-momentum, horizontal radiation stress term' 'meter second-2' ! [m/s2] 'u_hrad, scalar, series' 'ocean_time' 'idDu3d(M3hrad)' 'u3dvar' 1.0d0 'v_hrad' ! Input/Output '3D v-momentum, horizontal radiation stress term' 'meter second-2' ! [m/s2] 'v_hrad, scalar, series' 'ocean_time' 'idDv3d(M3hrad)' 'v3dvar' 1.0d0 'u_vrad' ! Input/Output '3D u-momentum, vertical radiation stress term' 'meter second-2' ! [m/s2] 'u_vrad, scalar, series' 'ocean_time' 'idDu3d(M3vrad)' 'u3dvar' 1.0d0 'v_vrad' ! Input/Output '3D v-momentum, vertical radiation stress term' 'meter second-2' ! [m/2] 'v_vrad, scalar, series' 'ocean_time' 'idDv3d(M3vrad)' 'v3dvar' 1.0d0 'u_hvisc' ! Input/Output '3D u-momentum, horizontal viscosity term' 'meter second-2' ! [m/s2] 'u_hvisc, scalar, series' 'ocean_time' 'idDu3d(M3hvis)' 'u3dvar' 1.0d0 'u_xvisc' ! Input/Output '3D u-momentum, horizontal XI-viscosity term' 'meter second-2' ! [m/s2] 'u_xvisc, scalar, series' 'ocean_time' 'idDu3d(M3xvis)' 'u3dvar' 1.0d0 'u_yvisc' ! Input/Output '3D u-momentum, horizontal ETA-viscosity term' 'meter second-2' ! [m/s2] 'u_yvisc, scalar, series' 'ocean_time' 'idDu3d(M3yvis)' 'u3dvar' 1.0d0 'v_hvisc' ! Input/Output '3D v-momentum, horizontal viscosity term' 'meter second-2' ! [m/s2] 'v_hvisc, scalar, series' 'ocean_time' 'idDv3d(M3hvis)' 'v3dvar' 1.0d0 'v_xvisc' ! Input/Output '3D v-momentum, horizontal XI-viscosity term' 'meter second-2' ! [m/s2] 'v_xvisc, scalar, series' 'ocean_time' 'idDv3d(M3xvis)' 'v3dvar' 1.0d0 'v_yvisc' ! Input/Output '3D v-momentum, horizontal ETA-viscosity term' 'meter second-2' ! [m/s2] 'v_yvisc, scalar, series' 'ocean_time' 'idDv3d(M3yvis)' 'v3dvar' 1.0d0 'u_vvisc' ! Input/Output '3D u-momentum, vertical viscosity term' 'meter second-2' ! [m/s2] 'u_vvisc, scalar, series' 'ocean_time' 'idDu3d(M3vvis)' 'u3dvar' 1.0d0 'v_vvisc' ! Input/Output '3D v-momentum, vertical viscosity term' 'meter second-2' ! [m/s2] 'v_vvisc, scalar, series' 'ocean_time' 'idDv3d(M3vvis)' 'v3dvar' 1.0d0 ! ! Tracer diagnostics terms. Notice that the variable names are generic ! to allow string concatenation with the actual tracer name. These ! entries MUST be entered in this file after all the active and ! passive tracer variable information. ! '_rate' ! Input/Output 'time rate of change' 'second-1' ! [1/s T] '_rate, scalar, series' 'ocean_time' 'idDtrc(iTrate)' 'r3dvar' 1.0d0 '_hadv' ! Input/Output 'horizontal advection term' 'second-1' ! [1/s T] '_hadv, scalar, series' 'ocean_time' 'idDtrc(iThadv)' 'r3dvar' 1.0d0 '_xadv' ! Input/Output 'horizontal XI-advection term' 'second-1' ! [1/s T] '_xadv, scalar, series' 'ocean_time' 'idDtrc(iTxadv)' 'r3dvar' 1.0d0 '_yadv' ! Input/Output 'horizontal ETA-advection term' 'second-1' ! [1/s T] '_yadv, scalar, series' 'ocean_time' 'idDtrc(iTyadv)' 'r3dvar' 1.0d0 '_vadv' ! Input/Output 'vertical advection term' 'second-1' ! [1/s T] '_vadv, scalar, series' 'ocean_time' 'idDtrc(iTvadv)' 'r3dvar' 1.0d0 '_hdiff' ! Input/Output 'horizontal diffusion term' 'second-1' ! [1/s T] '_hdiff, scalar, series' 'ocean_time' 'idDtrc(iThdif)' 'r3dvar' 1.0d0 '_xdiff' ! Input/Output 'horizontal XI-diffusion term' 'second-1' ! [1/s T] '_xdiff, scalar, series' 'ocean_time' 'idDtrc(iTxdif)' 'r3dvar' 1.0d0 '_ydiff' ! Input/Output 'horizontal ETA-diffusion term' 'second-1' ! [1/s T] '_ydiff, scalar, series' 'ocean_time' 'idDtrc(iTydif)' 'r3dvar' 1.0d0 '_sdiff' ! Input/Output 'horizontal S-diffusion rotated tensor term' 'second-1' ! [1/s T] '_sdiff, scalar, series' 'ocean_time' 'idDtrc(iTsdif)' 'r3dvar' 1.0d0 '_vdiff' ! Input/Output 'vertical diffusion term' 'second-1' '_vdiff, scalar, series' 'ocean_time' 'idDtrc(iTvdif)' 'r3dvar' 1.0d0 ! !----------------------------------------------------------------------- ! Forward trajectory variables for tangent linear and adjoint models. !----------------------------------------------------------------------- ! 'rzeta' ! Input/Output 'RHS of free-surface equation' 'meter3 second-1' ! [m3/s] 'rzeta, scalar, series' 'ocean_time' 'idRzet' 'r2dvar' 1.0d0 'rubar' ! Input/Output 'RHS of vertically integrated u-momentum' 'meter4 second-2' ! [m4/s2] 'rubar, scalar, series' 'ocean_time' 'idRu2d' 'u2dvar' 1.0d0 'rvbar' ! Input/Output 'RHS of vertically integrated v-momentum' 'meter4 second-2' ! [m4/s2] 'rvbar, scalar, series' 'ocean_time' 'idRv2d' 'v2dvar' 1.0d0 'rufrc' ! Input/Output 'RHS of vertically integrated u-coupling terms' 'meter4 second-2' ! [m4/s2] 'rufrc, scalar, series' 'ocean_time' 'idRuct' 'u2dvar' 1.0d0 'rvfrc' ! Input/Output 'RHS of vertically integrated v-coupling terms' 'meter4 second-2' ! [m4/s2] 'rvfrc, scalar, series' 'ocean_time' 'idRvct' 'v2dvar' 1.0d0 'DU_avg1' ! Input/Output 'time averaged u-flux for 2D equations' 'meter3 second-1' ! [m3/s] 'DU_avg1, scalar, series' 'ocean_time' 'idUfx1' 'u2dvar' 1.0d0 'DU_avg2' ! Input/Output 'time averaged u-flux for 3D equations coupling' 'meter3 second-1' ! [m3/s] 'DU_avg2, scalar, series' 'ocean_time' 'idUfx2' 'u2dvar' 1.0d0 'DV_avg1' ! Input/Output 'time averaged v-flux for 2D equations' 'meter3 second-1' ! [m3/s] 'DV_avg1, scalar, series' 'ocean_time' 'idVfx1' 'v2dvar' 1.0d0 'DV_avg2' ! Input/Output 'time averaged v-flux for 3D equations coupling' 'meter3 second-1' ! [m3/s] 'DV_avg2, scalar, series' 'ocean_time' 'idVfx2' 'v2dvar' 1.0d0 'ru' ! Input/Output 'RHS of total u-momentum' 'meter4 second-2' ! [m4/s2] 'ru, scalar, series' 'ocean_time' 'idRu3d' 'u3dvar' 1.0d0 'rv' ! Input/Output 'RHS of total v-momentum' 'meter4 second-2' ! [m4/s2] 'rv, scalar, series' 'ocean_time' 'idRv3d' 'v3dvar' 1.0d0 ! !----------------------------------------------------------------------- ! Varational data assimilation variables. !----------------------------------------------------------------------- ! 'Nobs' ! Input 'number of observations per survey time' 'nondimensional' ! [nondimensional] 'nulvar' 'nulvar' 'idNobs' 'nulvar' 1.0d0 'survey_time' ! Input 'observations survey time' 'day' ! [day] 'nulvar' 'nulvar' 'idOday' 'nulvar' 1.0d0 'obs_type' ! Input 'model state variable associated with observation' 'nondimensional' ! [nondimensional] 'nulvar' 'datum' 'idOtyp' 'nulvar' 1.0d0 'obs_provenance' ! Input 'observation origin' 'nondimensional' ! [nondimensional] 'nulvar' 'datum' 'idOpro' 'nulvar' 1.0d0 'obs_time' ! Input 'time of observation' 'day' ! [day] 'nulvar' 'datum' 'idObsT' 'nulvar' 1.0d0 'obs_lon' ! Input 'observation longitude' 'degrees_east' ! [degrees_east] 'nulvar' 'datum' 'idOlon' 'nulvar' 1.0d0 'obs_lat' ! Input 'observation latitude' 'degrees_north' ! [degrees_north] 'nulvar' 'datum' 'idOlat' 'nulvar' 1.0d0 'obs_depth' ! Input/Output 'depth of observation' 'meter' ! [m] 'nulvar' 'datum' 'idObsD' 'nulvar' 1.0d0 'obs_Xgrid' ! Input 'x-grid observation location' 'nondimensional' ! [nondimensional] 'nulvar' 'datum' 'idObsX' 'nulvar' 1.0d0 'obs_Ygrid' ! Input 'y-grid observation location' 'nondimensional' ! [nondimensional] 'nulvar' 'datum' 'idObsY' 'nulvar' 1.0d0 'obs_Zgrid' ! Input/Output 'z-grid observation location' 'nondimensional' ! [nondimensional] 'nulvar' 'datum' 'idObsZ' 'nulvar' 1.0d0 'obs_value' ! Input 'observation value' 'state variable units' ! [state units] 'nulvar' 'datum' 'idOval' 'nulvar' 1.0d0 'obs_meta' ! Input 'observation meta value' 'nondimensional' ! [Meta units] 'nulvar' 'datum' 'idOmet' 'nulvar' 1.0d0 'obs_variance' ! Input 'observation global variance' 'squared state variable units' ! [squared state units] 'nulvar' 'datum' 'idOvar' 'nulvar' 1.0d0 'obs_error' ! Input 'observation error, assigned weight' 'inverse squared state variable units' ! [1/(squared state units)] 'nulvar' 'datum' 'idOerr' 'nulvar' 1.0d0 'obs_scale' ! Output 'observation screening/normalization scale' 'nondimensional' 'nulvar' 'datum' 'idObsS' 'nulvar' 1.0d0 'Kh' ! Input 'convolution horizontal diffusion coefficient' 'meter2 second-1' ! [m2/s] 'Kh, scalar, series' 'ocean_time' 'idKhor' 'r2dvar' 1.0d0 'Kv' ! Input 'convolution vertical diffusion coefficient' 'meter2 second-1' ! [m2/s] 'Kv, scalar, series' 'ocean_time' 'idKver' 'w3dvar' 1.0d0 'NLmodel_initial' ! Output 'initial nonlinear model at observation locations' 'nulvar' 'nulvar' 'datum' 'idNLmi' 'nulvar' 1.0d0 'NLmodel_value' ! Output 'nonlinear model at observation locations' 'nulvar' 'nulvar' 'datum' 'idNLmo' 'nulvar' 1.0d0 'TLmodel_value' ! Output 'tangent linear model at observation locations' 'nulvar' 'nulvar' 'datum' 'idTLmo' 'nulvar' 1.0d0 'misfit_initial' ! Output 'initial model-observation misfit' 'nulvar' 'nulvar' 'datum' 'idMOMi' 'nulvar' 1.0d0 'misfit_final' ! Output 'final model-observation misfit' 'nulvar' 'nulvar' 'datum' 'idMOMf' 'nulvar' 1.0d0 'BgError_value' ! Output 'Background error at observation locations' 'nulvar' 'nulvar' 'datum' 'idBgEr' 'nulvar' 1.0d0 'BgThresh_value' ! Output 'Threshold for background quality control check of observations' 'nulvar' 'nulvar' 'datum' 'idBgTh' 'nulvar' 1.0d0